Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20716
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    24   1.4  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   3.3  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   3.3  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   3.3  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   3.3  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   5.8  

>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 595 RYCVPLCSGSCARSNF*PVDLSVHYSS 515
           R C+P+ SG    SNF    ++ HY+S
Sbjct: 4   RICIPISSGRTNGSNF-SKFINCHYTS 29


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +2

Query: 227 NTSDHREKV*WLSVEDAGTFKSTNRVV-MTLL 319
           N ++HRE+   L  E  G FK+ N +V +T+L
Sbjct: 189 NAAEHREQFVSLVRELRGAFKAENLLVTLTVL 220


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 96  RANRQTNKMAYRHSHDHDDDTDGIV 170
           R  ++ NKM +   +  DDD D +V
Sbjct: 140 RRLKKENKMTWEPKNKTDDDDDALV 164


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 121 WLTDTAMTTMTIQMALYWPKAFPWWC 198
           +LT    + + + +A  WPK    WC
Sbjct: 92  FLTGVMASLLFLNLAKRWPKFVKDWC 117


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 121 WLTDTAMTTMTIQMALYWPKAFPWWC 198
           +LT    + + + +A  WPK    WC
Sbjct: 92  FLTGVMASLLFLNLAKRWPKFVKDWC 117


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 232 GIRPHIMEAQKSTTMEMPLA 173
           G+RPH++E  K +    P A
Sbjct: 164 GLRPHLLENVKKSGYTKPTA 183


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,050
Number of Sequences: 336
Number of extensions: 3839
Number of successful extensions: 20
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)