BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20716 (722 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_01_0889 + 7426680-7427396,7428073-7428222,7429296-7429601 32 0.53 03_05_0608 - 26086437-26086892,26091253-26091921 30 1.6 06_03_0722 - 23869981-23870250 30 2.1 05_01_0470 - 3747783-3748097,3749433-3750305 30 2.1 08_02_0113 - 12715888-12716181,12717443-12717602,12718327-127183... 29 3.7 04_04_1377 - 33064906-33065607 29 3.7 05_05_0186 + 23071429-23072034,23072182-23072331,23073247-23073552 29 4.9 07_03_1196 + 24714626-24714649,24715034-24715297 28 6.5 02_05_1331 + 35736543-35736638,35737407-35737525,35737670-357377... 28 6.5 12_02_0365 + 18045340-18045783 28 8.6 03_04_0049 - 16814121-16814515,16815659-16815788,16815905-168159... 28 8.6 02_05_0039 + 25335690-25335883,25335984-25336131,25337292-253373... 28 8.6 02_02_0543 + 11360514-11361350,11361434-11361559,11361648-113619... 28 8.6 >07_01_0889 + 7426680-7427396,7428073-7428222,7429296-7429601 Length = 390 Score = 31.9 bits (69), Expect = 0.53 Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 2/46 (4%) Frame = +2 Query: 302 VVMTLLSFGGGVLLSTTFMHVMPEVQENIEN--LQARNILQEFDFS 433 V + +F GV+L+T F+H++P+ +N+ + L A +EF F+ Sbjct: 83 VFFLVKAFAAGVILATGFIHILPDAFDNLTDDCLPAGGPWKEFPFA 128 >03_05_0608 - 26086437-26086892,26091253-26091921 Length = 374 Score = 30.3 bits (65), Expect = 1.6 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%) Frame = +2 Query: 320 SFGGGVLLSTTFMHVMPEVQENIEN-LQARNILQEFDFS 433 +F GV+L+T +MHV+P+ N+ + R EF F+ Sbjct: 101 AFASGVILATGYMHVLPDAFNNLTSPCLPRKPWSEFPFA 139 >06_03_0722 - 23869981-23870250 Length = 89 Score = 29.9 bits (64), Expect = 2.1 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = +1 Query: 259 ALRRRRGDVQVYEPGGDDSALLRRRCAALNDFHARDA*SPR 381 A+RR R D+ + PG + A + RRCAA+ + H R PR Sbjct: 7 AMRRLR-DL-LAPPGESELARMYRRCAAIEELHRRKRRGPR 45 >05_01_0470 - 3747783-3748097,3749433-3750305 Length = 395 Score = 29.9 bits (64), Expect = 2.1 Identities = 14/62 (22%), Positives = 29/62 (46%) Frame = +2 Query: 299 RVVMTLLSFGGGVLLSTTFMHVMPEVQENIENLQARNILQEFDFSLTPLLTCCGFFIMYL 478 R ++ + + GV+LST+ +HV+P+ + + DF L + G + L Sbjct: 62 RGLLLVKCYAAGVILSTSLVHVLPDAHAALADCAVATRRPWRDFPFAGLFSLVGALLALL 121 Query: 479 IE 484 ++ Sbjct: 122 VD 123 >08_02_0113 - 12715888-12716181,12717443-12717602,12718327-12718368, 12718443-12718465,12718616-12720653,12720736-12720965, 12722207-12722329,12722438-12723010,12724684-12724733, 12726828-12726923,12726987-12727394,12727609-12727795 Length = 1407 Score = 29.1 bits (62), Expect = 3.7 Identities = 8/17 (47%), Positives = 11/17 (64%) Frame = -3 Query: 219 ISWKHRKAPPWKCLWPI 169 +SWKH K PW +W + Sbjct: 1245 LSWKHNKCYPWNWVWQV 1261 >04_04_1377 - 33064906-33065607 Length = 233 Score = 29.1 bits (62), Expect = 3.7 Identities = 10/30 (33%), Positives = 15/30 (50%) Frame = -2 Query: 370 RHHVHESR*EQHTASEGEQSHHHPVRRLER 281 +HH H H GE+ HHH ++ +R Sbjct: 180 KHHHHHHHHHPHLQPHGEEQHHHHEQKHQR 209 >05_05_0186 + 23071429-23072034,23072182-23072331,23073247-23073552 Length = 353 Score = 28.7 bits (61), Expect = 4.9 Identities = 10/31 (32%), Positives = 21/31 (67%) Frame = +2 Query: 302 VVMTLLSFGGGVLLSTTFMHVMPEVQENIEN 394 V +++ +F GGV+L+T +H++P E + + Sbjct: 81 VFLSVKAFAGGVILATGLVHILPAAFEALSS 111 >07_03_1196 + 24714626-24714649,24715034-24715297 Length = 95 Score = 28.3 bits (60), Expect = 6.5 Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 3/24 (12%) Frame = -2 Query: 331 ASEGEQSHHHPVRRL---ERPRVF 269 A EGE+ HHH RR +RP VF Sbjct: 52 ADEGEKYHHHAFRRFLGTQRPEVF 75 >02_05_1331 + 35736543-35736638,35737407-35737525,35737670-35737715, 35738117-35738172,35738452-35738547,35738844-35738961, 35739406-35739672,35740023-35740124,35740302-35740659, 35740750-35740863,35741045-35741676,35741895-35742103, 35742597-35742819,35743419-35743538,35743888-35743914, 35744281-35745045,35745431-35748511 Length = 2142 Score = 28.3 bits (60), Expect = 6.5 Identities = 11/34 (32%), Positives = 19/34 (55%) Frame = -1 Query: 632 GDSIPDSVEFLASLLCPSVQRLLRTLKFLTSRSV 531 GD PD +E L S + + + ++ L FL +R + Sbjct: 1282 GDQFPDEIEKLWSTVASNTRNIIPVLNFLITRGI 1315 >12_02_0365 + 18045340-18045783 Length = 147 Score = 27.9 bits (59), Expect = 8.6 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +2 Query: 329 GGVLLSTTFMHVMPEVQENIENLQ 400 GGVL+ T V+P VQ N E L+ Sbjct: 67 GGVLVERTIKEVLPAVQRNKEGLE 90 >03_04_0049 - 16814121-16814515,16815659-16815788,16815905-16815963, 16816610-16817102 Length = 358 Score = 27.9 bits (59), Expect = 8.6 Identities = 15/54 (27%), Positives = 23/54 (42%) Frame = +2 Query: 323 FGGGVLLSTTFMHVMPEVQENIENLQARNILQEFDFSLTPLLTCCGFFIMYLIE 484 F GGV L T MH + + E +L L + +L C G+ + L + Sbjct: 94 FAGGVFLGTAMMHFLADANETFADL-----LPGTAYPFAFMLACAGYVLTMLAD 142 >02_05_0039 + 25335690-25335883,25335984-25336131,25337292-25337349, 25337652-25338116,25338435-25338575,25338694-25339934 Length = 748 Score = 27.9 bits (59), Expect = 8.6 Identities = 15/36 (41%), Positives = 20/36 (55%) Frame = +1 Query: 520 NNGQTDLLVRNLSVRKSRCTEGHSNEAKNSTESGIE 627 + G D LVRN+SV + +NE NST +G E Sbjct: 180 DRGDVDYLVRNISVDNGYMSV--TNEQNNSTSNGTE 213 >02_02_0543 + 11360514-11361350,11361434-11361559,11361648-11361976, 11362078-11362861 Length = 691 Score = 27.9 bits (59), Expect = 8.6 Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Frame = +1 Query: 259 ALRRRRGDVQVYEPGGDDS-ALLRRRCAALNDFHARDA*SPREH*KFASEEHSSRI*FLT 435 A RR V V EP DD+ A+LRR + D HA + +P +S +S+ L Sbjct: 225 AFERRFQKVHVAEPSVDDTVAILRRLKPSYQDHHAWISRTPPSSPPPSSPVATSQAIDLV 284 Query: 436 DSPIDVLRLL 465 D RLL Sbjct: 285 DEACATARLL 294 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,258,585 Number of Sequences: 37544 Number of extensions: 440045 Number of successful extensions: 1307 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 1260 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1305 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1886372480 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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