Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20713
(722 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical pr... 92 3e-19
U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein. 89 2e-18
AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical... 89 2e-18
AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding... 72 5e-13
Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical pr... 65 4e-11
U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding p... 65 6e-11
U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding p... 65 6e-11
AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical... 60 2e-09
Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical pr... 58 6e-09
AF067608-16|AAC17657.2| 318|Caenorhabditis elegans Fk506-bindin... 45 6e-05
Z70752-3|CAA94755.3| 654|Caenorhabditis elegans Hypothetical pr... 36 0.022
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 34 0.12
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 34 0.12
Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical pr... 33 0.16
AF023454-1|AAB82794.1| 707|Caenorhabditis elegans protein phosp... 31 1.1
AF003389-12|AAM22065.1| 572|Caenorhabditis elegans Phosphatase ... 31 1.1
AF003389-11|AAC71139.2| 707|Caenorhabditis elegans Phosphatase ... 31 1.1
Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z54271-2|CAA91033.1| 309|Caenorhabditis elegans Hypothetical pr... 29 2.5
X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 29 2.5
Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z11576-1|CAA77663.1| 625|Caenorhabditis elegans aromatic-L-amin... 29 4.4
U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z81100-1|CAB03194.1| 331|Caenorhabditis elegans Hypothetical pr... 28 5.9
AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math ... 28 5.9
AC024824-6|AAK85504.2| 567|Caenorhabditis elegans Hypothetical ... 28 5.9
U29488-8|AAA68777.1| 320|Caenorhabditis elegans Hypothetical pr... 28 7.8
AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucle... 28 7.8
AF002197-6|AAD34661.1| 446|Caenorhabditis elegans Hypothetical ... 28 7.8
AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila so... 28 7.8
>Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical
protein F36H1.1 protein.
Length = 139
Score = 92.3 bits (219), Expect = 3e-19
Identities = 42/65 (64%), Positives = 51/65 (78%)
Frame = +1
Query: 259 RDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEV 438
R++ FTF +G G VIKGWDQGLL+MCVGE+R LTIP LGYGERGA IP ++ L F+V
Sbjct: 68 RNEEFTFTLGQGNVIKGWDQGLLNMCVGERRILTIPPHLGYGERGAPPKIPGNSVLKFDV 127
Query: 439 ELINI 453
EL+ I
Sbjct: 128 ELMKI 132
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +2
Query: 80 VLMLVALAGATFAGPE--VTELKTEVVSVPEGCTTKSKHGDMLTMHYTGTLDDGHKFDSS 253
++ L+ L +A E + +L+ V E C KS+ GD L MHYTGTL DG +FDSS
Sbjct: 6 IVGLLCLLAIAYAADEQKIDKLQIGVKKRAENCVQKSRKGDQLHMHYTGTLLDGTEFDSS 65
>U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein.
Length = 108
Score = 89.4 bits (212), Expect = 2e-18
Identities = 42/66 (63%), Positives = 48/66 (72%)
Frame = +1
Query: 256 DRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFE 435
DR PF F+IG G+VIKGWDQG+ M VGEK KLTI A LGYG RG IP +ATL FE
Sbjct: 42 DRGTPFKFKIGKGEVIKGWDQGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFE 101
Query: 436 VELINI 453
VEL+ +
Sbjct: 102 VELLGV 107
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +2
Query: 176 TKSKHGDMLTMHYTGTLDDGHKFDSS 253
TK K+G +T HY TL++G K DSS
Sbjct: 15 TKPKNGQTVTCHYVLTLENGKKIDSS 40
>AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical
protein Y18D10A.19 protein.
Length = 108
Score = 89.4 bits (212), Expect = 2e-18
Identities = 42/66 (63%), Positives = 48/66 (72%)
Frame = +1
Query: 256 DRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFE 435
DR PF F+IG G+VIKGWDQG+ M VGEK KLTI A LGYG RG IP +ATL FE
Sbjct: 42 DRGTPFKFKIGKGEVIKGWDQGVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFE 101
Query: 436 VELINI 453
VEL+ +
Sbjct: 102 VELLGV 107
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +2
Query: 176 TKSKHGDMLTMHYTGTLDDGHKFDSS 253
TK K+G +T HY TL++G K DSS
Sbjct: 15 TKPKNGQTVTCHYVLTLENGKKIDSS 40
>AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding
protein family protein3 protein.
Length = 261
Score = 71.7 bits (168), Expect = 5e-13
Identities = 32/64 (50%), Positives = 43/64 (67%)
Frame = +1
Query: 253 FDRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHF 432
+ R++PF F++G GQVIKG D + MC GEKRK+ IP L YGE G IP ++ LHF
Sbjct: 187 WSRNRPFIFKMGSGQVIKGMDIAMEGMCQGEKRKVVIPPELAYGENGRPPAIPGNSYLHF 246
Query: 433 EVEL 444
++ L
Sbjct: 247 DLSL 250
Score = 51.6 bits (118), Expect = 6e-07
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = +1
Query: 265 QPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEVEL 444
+P+TF +G G+VI G + + MCVGE+RK+ IP G+ E G V TL++ VEL
Sbjct: 72 KPYTFTLGKGEVIHGMEIAMEGMCVGEQRKVIIPPEQGFDEDG-DEVEGKGETLYYFVEL 130
Query: 445 INI 453
+I
Sbjct: 131 KSI 133
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +2
Query: 164 EGCTTKSKHGDMLTMHYTGTLDDGHKFDSS 253
EGCT K++ GD L YT L+DG DSS
Sbjct: 157 EGCTEKAQAGDTLHQQYTLNLEDGSFIDSS 186
>Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical
protein F31D4.3 protein.
Length = 431
Score = 65.3 bits (152), Expect = 4e-11
Identities = 32/63 (50%), Positives = 39/63 (61%)
Frame = +1
Query: 256 DRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFE 435
DR F+F +G G VIKGWD G+ M GE + TI + GYG+ G+ IP ATL FE
Sbjct: 55 DRGDQFSFNLGRGNVIKGWDLGVATMTKGEVAEFTIRSDYGYGDAGSPPKIPGGATLIFE 114
Query: 436 VEL 444
VEL
Sbjct: 115 VEL 117
Score = 31.5 bits (68), Expect = 0.63
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 179 KSKHGDMLTMHYTGTLDDGHKFDSS 253
K G + +HY GTL++G KFDSS
Sbjct: 29 KPTTGTTVKVHYVGTLENGTKFDSS 53
>U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform a protein.
Length = 264
Score = 64.9 bits (151), Expect = 6e-11
Identities = 29/70 (41%), Positives = 42/70 (60%)
Frame = +1
Query: 235 TQVRLEFDRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPP 414
T V F R+ PF F++ +VIKG D + MC GE+R++ IP+ GYG+ G IP
Sbjct: 186 TFVDSSFSRNAPFIFKLNNNEVIKGMDIAMTGMCEGERRQVVIPSDFGYGDDGRAPAIPG 245
Query: 415 HATLHFEVEL 444
A L+F++ L
Sbjct: 246 KARLYFDITL 255
Score = 63.3 bits (147), Expect = 2e-10
Identities = 28/69 (40%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Frame = +1
Query: 265 QPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERG-AGNVIPPHATLHFEVE 441
+P+TF +G GQVI G ++ + MC GEKRK+ IP +LG+G++G + I TL++ V+
Sbjct: 74 KPYTFTLGKGQVIPGMERAMTGMCKGEKRKVVIPGNLGFGDKGRERDNIKEDQTLYYTVQ 133
Query: 442 LINIGDSPP 468
L+++ + P
Sbjct: 134 LVDLFRAVP 142
>U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform b protein.
Length = 300
Score = 64.9 bits (151), Expect = 6e-11
Identities = 29/70 (41%), Positives = 42/70 (60%)
Frame = +1
Query: 235 TQVRLEFDRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPP 414
T V F R+ PF F++ +VIKG D + MC GE+R++ IP+ GYG+ G IP
Sbjct: 222 TFVDSSFSRNAPFIFKLNNNEVIKGMDIAMTGMCEGERRQVVIPSDFGYGDDGRAPAIPG 281
Query: 415 HATLHFEVEL 444
A L+F++ L
Sbjct: 282 KARLYFDITL 291
Score = 63.3 bits (147), Expect = 2e-10
Identities = 28/69 (40%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Frame = +1
Query: 265 QPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERG-AGNVIPPHATLHFEVE 441
+P+TF +G GQVI G ++ + MC GEKRK+ IP +LG+G++G + I TL++ V+
Sbjct: 110 KPYTFTLGKGQVIPGMERAMTGMCKGEKRKVVIPGNLGFGDKGRERDNIKEDQTLYYTVQ 169
Query: 442 LINIGDSPP 468
L+++ + P
Sbjct: 170 LVDLFRAVP 178
>AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical
protein Y18D10A.25 protein.
Length = 290
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +1
Query: 235 TQVRLEFDRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERG 393
T++ DR+ PF F+IG G+VIKGWDQG+ M V EK KLTI + G+ E+G
Sbjct: 231 TKIDSSRDRETPFKFKIGKGEVIKGWDQGVAQMSVKEKSKLTIAPAFGF-EKG 282
Score = 53.6 bits (123), Expect = 1e-07
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Frame = +1
Query: 253 FDRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHF 432
++ P F+IG G+VI G D G+ M VGE + GYG G +IP +A+L
Sbjct: 123 YESQNPIIFKIGFGEVIPGLDIGIPKMKVGEIATFHVSGKYGYGRAGFRGLIPRNASLTC 182
Query: 433 EVELINIG-DSPPATNVFKEIDADKDTCSPAKK*ATI 540
+V L N DS V ++I D + +K T+
Sbjct: 183 KVRLFNCSWDSYAKIGVDRQILVQGDNVTKSKNGQTV 219
Score = 32.3 bits (70), Expect = 0.36
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +2
Query: 176 TKSKHGDMLTMHYTGTLDDGHKFDSS 253
TKSK+G +T HY L DG K DSS
Sbjct: 211 TKSKNGQTVTCHYVLILVDGTKIDSS 236
>Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical
protein ZC455.10 protein.
Length = 259
Score = 58.0 bits (134), Expect = 6e-09
Identities = 28/70 (40%), Positives = 41/70 (58%)
Frame = +1
Query: 235 TQVRLEFDRDQPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPP 414
T V + R+ PF F++ +VI G D + MC GE+R++ IP+ GYG +G+ IP
Sbjct: 181 TLVDSSYSRNAPFVFRLRNREVIDGMDIAMDGMCEGERRRVVIPSEYGYGSQGSPPEIPG 240
Query: 415 HATLHFEVEL 444
A L FE+ L
Sbjct: 241 GARLFFEIVL 250
Score = 52.8 bits (121), Expect = 2e-07
Identities = 25/68 (36%), Positives = 40/68 (58%)
Frame = +1
Query: 265 QPFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGAGNVIPPHATLHFEVEL 444
+P+TF +G QVI G D+ + MC+GE RK+ IP LG+ + G L++ V+L
Sbjct: 76 KPYTFTLGRNQVIPGMDRAMRGMCIGEIRKVVIPPKLGFAKDSTGQ------PLYYTVQL 129
Query: 445 INIGDSPP 468
+N+ + P
Sbjct: 130 VNLFRANP 137
>AF067608-16|AAC17657.2| 318|Caenorhabditis elegans Fk506-binding
protein family protein7 protein.
Length = 318
Score = 44.8 bits (101), Expect = 6e-05
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +1
Query: 268 PFTFQIGVGQVIKGWDQGLLDMCVGEKRKLTIPASLGYGERGA--GNVIPPHATLHFEVE 441
P T Q+G G ++ G D+GL MC E RK+ +P + + N+ L F +E
Sbjct: 118 PVTIQLGTGMIMPGLDKGLKGMCAEELRKVRVPYRMSRKSKSKVWKNIPNDENWLIFNIE 177
Query: 442 LINIGDSPPATNVFKEIDADKD 507
++ I P FK +D ++D
Sbjct: 178 MVEIKPYTPEIQ-FKFLDLNED 198
>Z70752-3|CAA94755.3| 654|Caenorhabditis elegans Hypothetical
protein F25B3.3 protein.
Length = 654
Score = 36.3 bits (80), Expect = 0.022
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +3
Query: 561 ADGGEVSEDIKQMLESHDKLVEEIFQHEDKDKNGFISHEEFSGLSTTNF 707
A G V+ D + + +V+ +F+H D D++GFIS EEF L NF
Sbjct: 404 ASGVTVAPDNATVSKHISAMVDAVFKHYDHDRDGFISQEEFQ-LIAGNF 451
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/41 (39%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +3
Query: 564 DGGEVSEDIKQMLESHD-KLVEEIFQHEDKDKNGFISHEEF 683
D GE + +K+M + +D +++ E F+ D+D NGFI+ +EF
Sbjct: 89 DFGEFCQMMKRMNKENDSEMIREAFRVFDRDGNGFITADEF 129
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/41 (39%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +3
Query: 564 DGGEVSEDIKQMLESHD-KLVEEIFQHEDKDKNGFISHEEF 683
D GE + +K+M + +D +++ E F+ D+D NGFI+ +EF
Sbjct: 89 DFGEFCQMMKRMNKENDSEMIREAFRVFDRDGNGFITADEF 129
>Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical
protein T07G12.1 protein.
Length = 182
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 564 DGGEVSEDIKQM-LESHDKLVEEIFQHEDKDKNGFISHEEFSGLSTT 701
D GE + +K+M E+ +L+ F+ DKD NG+I+ +EF TT
Sbjct: 77 DFGEFCKMMKEMNKETDQELIRLAFKVFDKDGNGYITAQEFKHFMTT 123
>AF023454-1|AAB82794.1| 707|Caenorhabditis elegans protein
phosphatase with EF-hands protein.
Length = 707
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 582 EDIKQMLESHDKLVEEIFQHEDKDKNGFISHEEF 683
+DI + L H +E +F+ DKD +G +S +EF
Sbjct: 621 KDIVESLYRHKSTLETLFRFMDKDNSGQVSMKEF 654
>AF003389-12|AAM22065.1| 572|Caenorhabditis elegans Phosphatase
with ef hands protein1, isoform b protein.
Length = 572
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 582 EDIKQMLESHDKLVEEIFQHEDKDKNGFISHEEF 683
+DI + L H +E +F+ DKD +G +S +EF
Sbjct: 486 KDIVESLYRHKSTLETLFRFMDKDNSGQVSMKEF 519
>AF003389-11|AAC71139.2| 707|Caenorhabditis elegans Phosphatase
with ef hands protein1, isoform a protein.
Length = 707
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 582 EDIKQMLESHDKLVEEIFQHEDKDKNGFISHEEF 683
+DI + L H +E +F+ DKD +G +S +EF
Sbjct: 621 KDIVESLYRHKSTLETLFRFMDKDNSGQVSMKEF 654
>Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical
protein C13C12.1 protein.
Length = 218
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 591 KQMLESHDKLVEEIFQHEDKDKNGFISHEEF 683
+ M E+ +++ E F+ DKD NG I+ +EF
Sbjct: 145 RMMKETDSEMIREAFRVFDKDGNGVITAQEF 175
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 543 KKQMVPADGGEVSEDI-KQMLESHDKLVEEIFQHEDKDKNGFISHEE 680
++ +P++ + SEDI KQ+ E F DKD NG IS +E
Sbjct: 56 ERMAIPSNLMQFSEDIIKQLTPEEIDEFREAFMMFDKDGNGTISTKE 102
>Z54271-2|CAA91033.1| 309|Caenorhabditis elegans Hypothetical
protein F21D5.2 protein.
Length = 309
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +3
Query: 444 DQHR*LSTGHKRVQGNRRR*GHMLSREEVSDYLKKQMVPADGGEVSEDIKQMLESHDKLV 623
D+ + H+R + R G +L++++ + KQM G E + K+M E H K +
Sbjct: 8 DEENPILARHRREKKELR--GKILAKKKAAKCGNKQMQKEAGAECEKMEKEMDERHKKEL 65
Query: 624 EEIFQHEDKD 653
EE + E+ +
Sbjct: 66 EEAKKPEESE 75
>X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein.
Length = 161
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 591 KQMLESHDKLVEEIFQHEDKDKNGFISHEEF 683
+ M E+ +++ E F+ DKD NG I+ +EF
Sbjct: 88 RMMKETDSEMIREAFRVFDKDGNGVITAQEF 118
>Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical
protein E02A10.3 protein.
Length = 202
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 612 DKLVEEIFQHEDKDKNGFISHEEFS 686
+++++EIF D D NG I ++EF+
Sbjct: 165 NQIIDEIFNEADVDGNGVIDYDEFT 189
>Z11576-1|CAA77663.1| 625|Caenorhabditis elegans aromatic-L-amino
acid decarboxylaseprotein.
Length = 625
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 546 KQMVPADGGEVSEDIKQMLESHDKLVEEIFQHEDKDKNGFI 668
K ++P + +EDI +LE + KL+ H K FI
Sbjct: 101 KALLPPKAPQKAEDIDDILEDYHKLIVPGLSHSSSSKFSFI 141
>U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical
protein B0563.7 protein.
Length = 229
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +3
Query: 606 SHDKLVEEIFQHEDKDKNGFISHEEF 683
++++L+ E F+ D+D+NG I+ EF
Sbjct: 123 TNEELIRECFEIFDQDRNGIITENEF 148
>Z81100-1|CAB03194.1| 331|Caenorhabditis elegans Hypothetical
protein K08G2.7 protein.
Length = 331
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = -1
Query: 596 LLDVFAYFTTVGGNHLLLQIVAHFFAGEHVSLSASISL 483
LL FA+ + + HL QI +FF GEH+ L S SL
Sbjct: 167 LLVYFAHISNL--KHLNYQIDMYFFFGEHIFLILSNSL 202
>AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math
domain containingprotein 25 protein.
Length = 364
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +3
Query: 573 EVSEDI--KQMLESHDKLVEEIFQHEDKDKNGFISHEEFSGLST 698
E++ D+ ++ L ++ + ++FQ DKD +GFIS E + T
Sbjct: 263 ELTNDLLARKHLTKTEEEIRKVFQDLDKDGDGFISVAELQAVMT 306
>AC024824-6|AAK85504.2| 567|Caenorhabditis elegans Hypothetical
protein Y55B1BR.4 protein.
Length = 567
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +3
Query: 531 SDYLKKQM-VPADGGEVSEDIKQMLESH-DKLVEEIFQHEDKDK 656
S++L+ Q +P +G + S+D + LE+H + E +F+ +K K
Sbjct: 298 SEWLQCQSEIPENGIDTSDDFQSFLENHKGRFYESVFRWRNKKK 341
>U29488-8|AAA68777.1| 320|Caenorhabditis elegans Hypothetical
protein C56C10.9 protein.
Length = 320
Score = 27.9 bits (59), Expect = 7.8
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Frame = +3
Query: 522 EEVSDYLKKQMVPADG----GEVSEDIKQMLESH---DKLVEEIF-QHEDKDKNGFISHE 677
E + + KK V DG GE+ + I++ +E H K EIF D +K+G I E
Sbjct: 65 ESIKEMFKKTDVNDDGFLTAGELKQQIRKNMEEHLEKSKNDSEIFFDIVDTNKDGSIVWE 124
Query: 678 EF 683
EF
Sbjct: 125 EF 126
>AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucleotide
exchange factorfor RAS protein.
Length = 1413
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = -1
Query: 461 ESPMLINSTSKCNVAWGGITLP----APRSP*PKDAGIVSLRFSPTHMSS 324
+ P L+ +S+ N + ++LP AP P PK +G++S SPT +++
Sbjct: 1270 QPPPLLPRSSRANQS-NSVSLPPTTQAPMPPAPKSSGMMSTATSPTTLTT 1318
>AF002197-6|AAD34661.1| 446|Caenorhabditis elegans Hypothetical
protein F20H11.4 protein.
Length = 446
Score = 27.9 bits (59), Expect = 7.8
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 492 DFLEHVCGRWRVTDVDQL 439
D + HVCG +R+T +DQ+
Sbjct: 232 DNISHVCGIYRITKIDQM 249
>AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila sos
homolog protein 1 protein.
Length = 1493
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = -1
Query: 461 ESPMLINSTSKCNVAWGGITLP----APRSP*PKDAGIVSLRFSPTHMSS 324
+ P L+ +S+ N + ++LP AP P PK +G++S SPT +++
Sbjct: 1270 QPPPLLPRSSRANQS-NSVSLPPTTQAPMPPAPKSSGMMSTATSPTTLTT 1318
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,532,721
Number of Sequences: 27780
Number of extensions: 348934
Number of successful extensions: 1058
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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