Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20711
         (578 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical ...    30   1.4  
AL132841-1|CAB60330.1|  217|Caenorhabditis elegans Hypothetical ...    30   1.4  
U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical pr...    29   1.8  
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z92808-1|CAB07266.2|  606|Caenorhabditis elegans Hypothetical pr...    28   4.2  
Z81476-3|CAB03922.3|  592|Caenorhabditis elegans Hypothetical pr...    28   4.2  
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr...    27   7.3  
Z68222-9|CAE46689.1|  631|Caenorhabditis elegans Hypothetical pr...    27   7.3  
Z68222-8|CAC70146.2|  613|Caenorhabditis elegans Hypothetical pr...    27   7.3  
Z68217-11|CAE46673.1|  631|Caenorhabditis elegans Hypothetical p...    27   7.3  
Z68217-10|CAC70099.2|  613|Caenorhabditis elegans Hypothetical p...    27   7.3  
AF003151-20|AAK18920.2|  251|Caenorhabditis elegans Hypothetical...    27   9.6  

>AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical
           protein Y39B6A.1 protein.
          Length = 735

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +2

Query: 395 LSPTHRQHTHHLAKSDVEASEVHKSRHVSQLADWTTSS 508
           +SP H  HTHH   +     EVH   H  +  D ++SS
Sbjct: 74  ISPHHGHHTHHAHGAHPGHHEVHHHHHHVKAQDSSSSS 111


>AL132841-1|CAB60330.1|  217|Caenorhabditis elegans Hypothetical
           protein Y15E3A.2 protein.
          Length = 217

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 17/42 (40%), Positives = 20/42 (47%)
 Frame = +3

Query: 447 RRARCISPATCRS*RTGPRAHKISLHYKHAPPKAVFIQHSAE 572
           RR R  SPATCR     P   K+     +  PKA F + S E
Sbjct: 42  RRCRSASPATCRDLTISPEHQKLIKRSWNRIPKAQFGRASLE 83


>U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical protein
            F30H5.3 protein.
          Length = 1599

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -1

Query: 359  PDRCSI*RPTCVAGRSCSRCTSDSCWACSAATSP 258
            P  C+I + TC +G SC R  S +   C+    P
Sbjct: 1169 PQSCAIGQSTCPSGYSCQRAISGAQLCCTTNDEP 1202


>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical
           protein E01G6.1 protein.
          Length = 1391

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = -1

Query: 374 ESRETPDRCSI*-RPTCVAGRSCSRCTSDSCWACSAATS 261
           E   TP  C++  R TC +G SC + +++    C A T+
Sbjct: 538 EGEITPKTCTLNVRSTCPSGASCVKSSTNQSICCKAVTA 576


>Z92808-1|CAB07266.2|  606|Caenorhabditis elegans Hypothetical
           protein M04C3.2 protein.
          Length = 606

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 557 YEHGLGRRVLVVEADLVSSWSSPL 486
           Y H +G+ +LVV  D++ SW   L
Sbjct: 277 YGHSMGKTLLVVPPDMIESWKKLL 300


>Z81476-3|CAB03922.3|  592|Caenorhabditis elegans Hypothetical
           protein C25F9.4 protein.
          Length = 592

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 557 YEHGLGRRVLVVEADLVSSWSSPL 486
           Y H +G+ +LVV  D++ SW   L
Sbjct: 276 YGHSMGKTLLVVPPDMIESWKKLL 299


>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical
           protein T01D3.7 protein.
          Length = 2882

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 320 GRSCSRCTSDSCWAC 276
           G  CS+C  DSC AC
Sbjct: 914 GSDCSKCVGDSCEAC 928


>Z68222-9|CAE46689.1|  631|Caenorhabditis elegans Hypothetical
           protein F58G6.5c protein.
          Length = 631

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 27/91 (29%), Positives = 36/91 (39%)
 Frame = +2

Query: 254 PTGSSQPSTPNKSHSYNDYMISLQHKLASISNSGPVSPGSPLEYSPALSPTHRQHTHHLA 433
           P GS   ST   +H   +    L+        S PV    PL+ + A+SP   Q      
Sbjct: 33  PNGSPTTST---THRRQNSSSGLEPARKRPKLSPPVLTAMPLDLTDAVSPNESQACTSSL 89

Query: 434 KSDVEASEVHKSRHVSQLADWTTSSQDQPPL 526
           K  V A+   +      +AD  TSS   PPL
Sbjct: 90  KGVVTAAGAAQ----MSVADRMTSSSVAPPL 116


>Z68222-8|CAC70146.2|  613|Caenorhabditis elegans Hypothetical
           protein F58G6.5b protein.
          Length = 613

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 27/91 (29%), Positives = 36/91 (39%)
 Frame = +2

Query: 254 PTGSSQPSTPNKSHSYNDYMISLQHKLASISNSGPVSPGSPLEYSPALSPTHRQHTHHLA 433
           P GS   ST   +H   +    L+        S PV    PL+ + A+SP   Q      
Sbjct: 15  PNGSPTTST---THRRQNSSSGLEPARKRPKLSPPVLTAMPLDLTDAVSPNESQACTSSL 71

Query: 434 KSDVEASEVHKSRHVSQLADWTTSSQDQPPL 526
           K  V A+   +      +AD  TSS   PPL
Sbjct: 72  KGVVTAAGAAQ----MSVADRMTSSSVAPPL 98


>Z68217-11|CAE46673.1|  631|Caenorhabditis elegans Hypothetical
           protein F58G6.5c protein.
          Length = 631

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 27/91 (29%), Positives = 36/91 (39%)
 Frame = +2

Query: 254 PTGSSQPSTPNKSHSYNDYMISLQHKLASISNSGPVSPGSPLEYSPALSPTHRQHTHHLA 433
           P GS   ST   +H   +    L+        S PV    PL+ + A+SP   Q      
Sbjct: 33  PNGSPTTST---THRRQNSSSGLEPARKRPKLSPPVLTAMPLDLTDAVSPNESQACTSSL 89

Query: 434 KSDVEASEVHKSRHVSQLADWTTSSQDQPPL 526
           K  V A+   +      +AD  TSS   PPL
Sbjct: 90  KGVVTAAGAAQ----MSVADRMTSSSVAPPL 116


>Z68217-10|CAC70099.2|  613|Caenorhabditis elegans Hypothetical
           protein F58G6.5b protein.
          Length = 613

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 27/91 (29%), Positives = 36/91 (39%)
 Frame = +2

Query: 254 PTGSSQPSTPNKSHSYNDYMISLQHKLASISNSGPVSPGSPLEYSPALSPTHRQHTHHLA 433
           P GS   ST   +H   +    L+        S PV    PL+ + A+SP   Q      
Sbjct: 15  PNGSPTTST---THRRQNSSSGLEPARKRPKLSPPVLTAMPLDLTDAVSPNESQACTSSL 71

Query: 434 KSDVEASEVHKSRHVSQLADWTTSSQDQPPL 526
           K  V A+   +      +AD  TSS   PPL
Sbjct: 72  KGVVTAAGAAQ----MSVADRMTSSSVAPPL 98


>AF003151-20|AAK18920.2|  251|Caenorhabditis elegans Hypothetical
           protein D1007.16 protein.
          Length = 251

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +2

Query: 251 KPTGSSQPSTPNKSHSYNDYMISLQHKLASISNSGPVSPGSPLEYSPALS 400
           KP    +P+ P+ S++YN       H    IS+SG  +  S  +Y  ALS
Sbjct: 198 KPYTEREPAPPSSSNTYNH---KESHVAPYISSSGNKNKDSEEKYGLALS 244


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,743,086
Number of Sequences: 27780
Number of extensions: 253189
Number of successful extensions: 901
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 899
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)