Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20710
(662 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 158 1e-37
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 158 1e-37
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 136 6e-31
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 130 2e-29
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 125 1e-27
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 124 3e-27
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 116 7e-25
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 105 9e-22
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 104 2e-21
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 88 2e-16
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 81 3e-14
UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whol... 75 1e-12
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 75 2e-12
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 74 4e-12
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j... 70 6e-11
UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7; Archaea... 63 7e-09
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella... 58 1e-07
UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5; Euryarc... 53 5e-06
UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5; Archaea... 53 7e-06
UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole gen... 47 5e-04
UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1; Methano... 46 8e-04
UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4; Archaea... 45 0.002
UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3; Euryarc... 44 0.002
UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 44 0.003
UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3; Desulfu... 41 0.023
UniRef50_A0RXG5 Cluster: Ribosomal protein S8E; n=2; Thermoprote... 39 0.093
UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5; Methano... 37 0.38
UniRef50_Q2W531 Cluster: TPR repeat; n=3; Magnetospirillum|Rep: ... 37 0.50
UniRef50_Q8ZTB8 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 36 0.66
UniRef50_UPI0000DB7956 Cluster: PREDICTED: similar to Deformed C... 35 2.0
UniRef50_UPI0000F32D0C Cluster: Zinc finger CCCH domain-containi... 34 2.7
UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:... 34 3.5
UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1; Methano... 33 4.6
UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;... 33 6.1
UniRef50_A7D873 Cluster: Exodeoxyribonuclease III Xth; n=2; Meth... 33 6.1
UniRef50_Q8TN82 Cluster: Predicted protein; n=1; Methanosarcina ... 33 6.1
UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium ja... 33 8.1
UniRef50_Q5CW62 Cluster: FH2 domain containing protein; n=2; Cry... 33 8.1
UniRef50_A7F1W3 Cluster: Putative uncharacterized protein; n=1; ... 33 8.1
UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1; ... 33 8.1
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 158 bits (384), Expect = 1e-37
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3
Query: 6 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 185
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRL
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRL 60
Query: 186 DTGNFSWGSECSTRKTRIIDVVY 254
D GNFSWGSEC TRKTRIIDVVY
Sbjct: 61 DVGNFSWGSECCTRKTRIIDVVY 83
Score = 114 bits (274), Expect = 2e-24
Identities = 51/65 (78%), Positives = 58/65 (89%)
Frame = +2
Query: 257 ASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQK 436
ASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K
Sbjct: 85 ASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKK 144
Query: 437 TARKY 451
+KY
Sbjct: 145 IQKKY 149
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 158 bits (384), Expect = 1e-37
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3
Query: 6 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 185
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRL
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRL 60
Query: 186 DTGNFSWGSECSTRKTRIIDVVY 254
D GNFSWGSEC TRKTRIIDVVY
Sbjct: 61 DVGNFSWGSECCTRKTRIIDVVY 83
Score = 130 bits (315), Expect = 2e-29
Identities = 60/85 (70%), Positives = 70/85 (82%)
Frame = +2
Query: 257 ASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQK 436
ASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K
Sbjct: 85 ASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKK 144
Query: 437 TARKYLARQRLAKVEGALEEQFHTG 511
+KY R++ AK+ LEEQF G
Sbjct: 145 IQKKYDERKKNAKISSLLEEQFQQG 169
Score = 80.2 bits (189), Expect = 4e-14
Identities = 33/40 (82%), Positives = 39/40 (97%)
Frame = +1
Query: 508 GRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 627
G+LLAC+ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 169 GKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 136 bits (328), Expect = 6e-31
Identities = 63/83 (75%), Positives = 70/83 (84%)
Frame = +3
Query: 6 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 185
MGISRD HKRRATGGKR +RKKRK+ELGRPAANT+LG R+H VR+RGGNTK RALRL
Sbjct: 1 MGISRDSAHKRRATGGKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRL 60
Query: 186 DTGNFSWGSECSTRKTRIIDVVY 254
+TGNF+W SE RKTRI DVVY
Sbjct: 61 ETGNFAWASEGVARKTRIADVVY 83
Score = 122 bits (294), Expect = 8e-27
Identities = 57/87 (65%), Positives = 70/87 (80%), Gaps = 2/87 (2%)
Frame = +2
Query: 257 ASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEA--IINKKRS 430
ASNNELVRTKTLVKN+IVV+DATPFRQWYE+HY LPLGRK+ K + E+ ++ KKRS
Sbjct: 85 ASNNELVRTKTLVKNSIVVIDATPFRQWYEAHYVLPLGRKRNPKHAQKEDENDVLTKKRS 144
Query: 431 QKTARKYLARQRLAKVEGALEEQFHTG 511
+K +KYL RQ+ KVE ALE+QF +G
Sbjct: 145 EKVMKKYLERQKYGKVEQALEDQFTSG 171
Score = 77.8 bits (183), Expect = 2e-13
Identities = 32/38 (84%), Positives = 38/38 (100%)
Frame = +1
Query: 508 GRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 621
GR+LAC++SRPGQCGR+DGYILEGKELEFYL+KIKSK+
Sbjct: 171 GRILACISSRPGQCGRSDGYILEGKELEFYLKKIKSKK 208
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 130 bits (315), Expect = 2e-29
Identities = 60/85 (70%), Positives = 70/85 (82%)
Frame = +2
Query: 257 ASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQK 436
ASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K
Sbjct: 65 ASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKK 124
Query: 437 TARKYLARQRLAKVEGALEEQFHTG 511
+KY R++ AK+ LEEQF G
Sbjct: 125 IQKKYDERKKNAKISSLLEEQFQQG 149
Score = 98.3 bits (234), Expect = 1e-19
Identities = 53/83 (63%), Positives = 58/83 (69%)
Frame = +3
Query: 6 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 185
MGISRD+WHKRR TGGKR P KKRKYELGRPAANT++GP+RIH+VR RGG
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGG--------- 51
Query: 186 DTGNFSWGSECSTRKTRIIDVVY 254
C TRKTRIIDVVY
Sbjct: 52 ----------C-TRKTRIIDVVY 63
Score = 80.2 bits (189), Expect = 4e-14
Identities = 33/40 (82%), Positives = 39/40 (97%)
Frame = +1
Query: 508 GRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 627
G+LLAC+ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 149 GKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 188
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 125 bits (301), Expect = 1e-27
Identities = 60/84 (71%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALR 182
MGISRD HKRRATGGK+ RKKRKYELGR ANT+L + + VR RGGN K+RALR
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 183 LDTGNFSWGSECSTRKTRIIDVVY 254
LDTGN+SWGSE TRKTRI+DVVY
Sbjct: 61 LDTGNYSWGSEAVTRKTRILDVVY 84
Score = 78.2 bits (184), Expect = 2e-13
Identities = 44/93 (47%), Positives = 57/93 (61%), Gaps = 8/93 (8%)
Frame = +2
Query: 257 ASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKK--------GAKLTEAEEAI 412
ASNNELVRT+TLVK+AIV VDA PF+QWY +HY + +GRKK A+ E E A
Sbjct: 86 ASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKTPAAKKDNAEGQEVEAAA 145
Query: 413 INKKRSQKTARKYLARQRLAKVEGALEEQFHTG 511
K+S RK R+ ++ +EEQF +G
Sbjct: 146 EETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSG 178
Score = 76.6 bits (180), Expect = 5e-13
Identities = 31/40 (77%), Positives = 38/40 (95%)
Frame = +1
Query: 508 GRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 627
GRLLAC++SRPGQCGRADGYILEGKELEFY++K++ K+ K
Sbjct: 178 GRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK 217
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 124 bits (298), Expect = 3e-27
Identities = 56/83 (67%), Positives = 68/83 (81%)
Frame = +3
Query: 6 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 185
MGISRD HKRR TGG+ +KKRKYELGRP++NT+LG + + VR RGGN K+RALRL
Sbjct: 1 MGISRDSRHKRRLTGGRYPVHKKKRKYELGRPSSNTKLGSKLVRKVRCRGGNLKFRALRL 60
Query: 186 DTGNFSWGSECSTRKTRIIDVVY 254
D+GNFSWGS+ TRKTR++DVVY
Sbjct: 61 DSGNFSWGSQNVTRKTRVMDVVY 83
Score = 66.5 bits (155), Expect = 5e-10
Identities = 26/38 (68%), Positives = 33/38 (86%)
Frame = +1
Query: 508 GRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 621
GRLLAC++SRPGQCGR DGY+LEG+EL FY R++ K+
Sbjct: 149 GRLLACISSRPGQCGRCDGYVLEGEELNFYRRRMDKKK 186
Score = 64.5 bits (150), Expect = 2e-09
Identities = 28/39 (71%), Positives = 34/39 (87%)
Frame = +2
Query: 257 ASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGR 373
AS+NELVRTKTLVKNAIV VD TPF+ W+++HY L LG+
Sbjct: 85 ASSNELVRTKTLVKNAIVTVDPTPFKLWFKTHYGLELGK 123
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 116 bits (278), Expect = 7e-25
Identities = 54/81 (66%), Positives = 63/81 (77%)
Frame = +3
Query: 6 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 185
MGISRD HKR ATG KR+ RKKR +E GR ANTR+GP+RIH VR+RGGN K+R LRL
Sbjct: 1 MGISRDSRHKRSATGAKRSHYRKKRAFEKGRQPANTRIGPKRIHLVRTRGGNQKFRGLRL 60
Query: 186 DTGNFSWGSECSTRKTRIIDV 248
++GNFSWGSE RK R+I V
Sbjct: 61 ESGNFSWGSEGIARKVRVIVV 81
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +1
Query: 508 GRLLACVASRPGQCGRADGYILEGKELEFYLRKIK 612
GRL A V+SRPGQ GR DGYILEG+EL FY R I+
Sbjct: 106 GRLYAVVSSRPGQSGRVDGYILEGEELAFYQRAIR 140
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 105 bits (252), Expect = 9e-22
Identities = 50/83 (60%), Positives = 59/83 (71%)
Frame = +3
Query: 6 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 185
MGI R HKR+ TGGK RK+ K ELGR ANTRLG +R+ VR+RGGN K RALRL
Sbjct: 1 MGIVRSRLHKRKITGGKTKIHRKRMKAELGRLPANTRLGARRVSPVRARGGNFKIRALRL 60
Query: 186 DTGNFSWGSECSTRKTRIIDVVY 254
DTGNF+W SE + R++DVVY
Sbjct: 61 DTGNFAWASEAIAHRVRLLDVVY 83
Score = 67.7 bits (158), Expect = 2e-10
Identities = 43/98 (43%), Positives = 55/98 (56%), Gaps = 13/98 (13%)
Frame = +2
Query: 257 ASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPL-GRKKGAKLTEAEE--------A 409
A++NELVRTKTLVKN IV VDA PF++WY HY + L KK K A E A
Sbjct: 85 ATSNELVRTKTLVKNCIVAVDAAPFKRWYAKHYGIDLDADKKSTKAAVAAEKKGRKSAHA 144
Query: 410 IINK----KRSQKTARKYLARQRLAKVEGALEEQFHTG 511
+K K S K R++ R+R +VE A+ +Q G
Sbjct: 145 AADKYDVNKASPKLQREWTRRRRNHRVEKAIADQLREG 182
Score = 56.4 bits (130), Expect = 6e-07
Identities = 23/38 (60%), Positives = 32/38 (84%)
Frame = +1
Query: 508 GRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 621
GR+LA + SRPGQ GRADG +LEG EL+FYL++++ K+
Sbjct: 182 GRVLARITSRPGQSGRADGILLEGAELQFYLKRLEKKK 219
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 104 bits (249), Expect = 2e-21
Identities = 49/83 (59%), Positives = 62/83 (74%)
Frame = +3
Query: 6 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 185
MGI+RD HKRRATGGK+ ++KK+K +GR ANTRLG R+H VR R G K RALRL
Sbjct: 1 MGITRDSRHKRRATGGKKNSMQKKKKNTMGRQPANTRLGAIRVHDVRCRYGIIKRRALRL 60
Query: 186 DTGNFSWGSECSTRKTRIIDVVY 254
+ GNFSW S+ T+ T+I++VVY
Sbjct: 61 ENGNFSWASQSITKGTKILNVVY 83
Score = 61.7 bits (143), Expect = 2e-08
Identities = 25/38 (65%), Positives = 32/38 (84%)
Frame = +1
Query: 508 GRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 621
GR+LAC++SRPGQ G +GYILEGKEL+FY +KI K+
Sbjct: 199 GRVLACISSRPGQTGSVEGYILEGKELDFYSKKISDKK 236
Score = 45.6 bits (103), Expect = 0.001
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Frame = +2
Query: 257 ASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKK---- 424
AS+N+ VRT TLVK AI+ +D PFR W+ Y + K E+ KK
Sbjct: 85 ASDNDFVRTNTLVKGAIIEIDPAPFRLWFLKFYGKDIASTDYYKSLESATFKTEKKVVVP 144
Query: 425 RSQKTARKYLARQRLAKVEGAL 490
+ ++ K +A Q++A+ + AL
Sbjct: 145 KEEENKEKTIA-QQIAETQVAL 165
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 88.2 bits (209), Expect = 2e-16
Identities = 41/70 (58%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Frame = +3
Query: 51 GKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 227
G P+++++ YELGR ANT+L + + VR RGGNTK+RALR DT N+SWGSE TR
Sbjct: 113 GPFCPLQEEQGYELGRQPANTKLSSNKTVRRVRVRGGNTKWRALRFDTCNYSWGSEALTR 172
Query: 228 KTRIIDVVYM 257
KTRI+DVVY+
Sbjct: 173 KTRILDVVYI 182
Score = 68.1 bits (159), Expect = 2e-10
Identities = 29/50 (58%), Positives = 40/50 (80%)
Frame = +2
Query: 257 ASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 406
A+NNELVRT+TLVK+AIV VDA PF+QWY +HY + +GRKK + + ++
Sbjct: 183 ATNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKVSVAKKDD 232
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 80.6 bits (190), Expect = 3e-14
Identities = 44/92 (47%), Positives = 55/92 (59%), Gaps = 9/92 (9%)
Frame = +3
Query: 6 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRL---------GPQRIHSVRSRGG 158
MGI+ D +KR TG + KKRKY LGR ANT+L Q+I ++R RGG
Sbjct: 1 MGITHDKMYKRSKTGAVQGKWHKKRKYNLGRQPANTKLIVKVTSKKNEGQKISTIRCRGG 60
Query: 159 NTKYRALRLDTGNFSWGSECSTRKTRIIDVVY 254
N K RALRL G+F+WGS + K RI+ VVY
Sbjct: 61 NIKRRALRLSHGSFAWGSADISHKARILQVVY 92
Score = 49.2 bits (112), Expect = 9e-05
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = +1
Query: 514 LLACVASRPGQCGRADGYILEGKELEFYLRKIKSK 618
+LA ++SRPGQ G ADGYILEG EL FY +K+ K
Sbjct: 140 ILARISSRPGQVGTADGYILEGPELLFYQKKLAPK 174
Score = 36.3 bits (80), Expect = 0.66
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +2
Query: 257 ASNNELVRTKTLVKNAIVVVDATPFR 334
+++NELVRT TLVK +V +D+ PF+
Sbjct: 94 STSNELVRTNTLVKGCVVQIDSAPFK 119
>UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whole
genome shotgun sequence; n=2; Coelomata|Rep: Chromosome
undetermined SCAF13783, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 149
Score = 75.4 bits (177), Expect = 1e-12
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = +1
Query: 520 ACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 627
AC+ASRPGQCGRADGYILEGKELEFYLRKIK+K+ K
Sbjct: 114 ACIASRPGQCGRADGYILEGKELEFYLRKIKAKKGK 149
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 74.5 bits (175), Expect = 2e-12
Identities = 39/93 (41%), Positives = 56/93 (60%)
Frame = +3
Query: 6 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 185
MGI+ HKRR TG K RKKR G ++T++G +++ VR RGGN KY+ALRL
Sbjct: 1 MGINHRGDHKRRKTGAKAVISRKKRNNRAGSQPSSTKIGERKVTPVRVRGGNRKYKALRL 60
Query: 186 DTGNFSWGSECSTRKTRIIDVVYMHLTMNWCVQ 284
D G+F + + R +++ VVY H + N V+
Sbjct: 61 DMGHFKFITTGKFRMAKLLQVVY-HPSSNELVR 92
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +1
Query: 508 GRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSK 618
G L A + SRPGQ G A G++L+G EL+FY K K
Sbjct: 131 GHLYAIITSRPGQVGMAQGHVLQGDELKFYADKFNKK 167
Score = 35.1 bits (77), Expect = 1.5
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +2
Query: 254 YASNNELVRTKTLVKNAIVVVDATPFR 334
+ S+NELVRT TL K+++V + A PF+
Sbjct: 84 HPSSNELVRTNTLTKSSVVKISAEPFK 110
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 73.7 bits (173), Expect = 4e-12
Identities = 37/83 (44%), Positives = 54/83 (65%)
Frame = +3
Query: 6 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 185
MGI+R+ HKR++TGG ++ RKKR + GR +NT++G + + +R RGG K RAL L
Sbjct: 1 MGINREGLHKRKSTGGLKSCWRKKRNHAKGRQPSNTKIGRRCVVKLRVRGGGVKTRALFL 60
Query: 186 DTGNFSWGSECSTRKTRIIDVVY 254
GNFS+ S T K +I+ V +
Sbjct: 61 SYGNFSFVSIQRTFKAKILSVAF 83
Score = 58.8 bits (136), Expect = 1e-07
Identities = 24/37 (64%), Positives = 33/37 (89%)
Frame = +1
Query: 508 GRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSK 618
G++LA + SRPGQ GRADGYILEG+EL+++L+KI+ K
Sbjct: 142 GKILARICSRPGQSGRADGYILEGQELDYFLKKIQKK 178
>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03085 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 69.7 bits (163), Expect = 6e-11
Identities = 28/40 (70%), Positives = 37/40 (92%)
Frame = +1
Query: 508 GRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 627
GRLLAC++S+PGQ GRADGY+ EGKELEF+ +K+K+K+AK
Sbjct: 81 GRLLACISSKPGQVGRADGYLFEGKELEFFSKKLKAKKAK 120
Score = 56.0 bits (129), Expect = 8e-07
Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Frame = +2
Query: 296 KNAIVVVDATPFRQWYESHYTLPLGR-----KKGAKLT--EAEEAIINKKRSQKTARKYL 454
K+AIV + PFRQW+E+ Y LG KKG +T EE + KKRS+ +K+
Sbjct: 1 KSAIVQIGGAPFRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSKSALKKFE 60
Query: 455 ARQRL--AKVEGALEEQFHTG 511
RQ L A VE +L+E+F TG
Sbjct: 61 TRQALPQANVEESLKEEFVTG 81
>UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7;
Archaea|Rep: 30S ribosomal protein S8e - Picrophilus
torridus
Length = 125
Score = 62.9 bits (146), Expect = 7e-09
Identities = 30/68 (44%), Positives = 41/68 (60%)
Frame = +3
Query: 36 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 215
R+ +GGK P KR+YELGR TRLG + + +RS GGN+K+ LR D N +
Sbjct: 10 RKPSGGKLRPNHSKRRYELGREPTLTRLGDRELRKIRSYGGNSKFALLRCDYANVYNPKD 69
Query: 216 CSTRKTRI 239
+TRK +I
Sbjct: 70 KTTRKVKI 77
>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
natans|Rep: Ribosomal protein S8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 176
Score = 58.4 bits (135), Expect = 1e-07
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Frame = +3
Query: 33 KRRATGGKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWG 209
K++ TGGK+ I KK+ + G NT L I R RGGN K++A+ L G+F W
Sbjct: 3 KKKLTGGKKKKISKKKNHSKGNNPTNTVLRRANFIKMTRVRGGNFKFKAISLGKGSFQWK 62
Query: 210 SECSTRKTRIIDVVYMHLTMNWCVQRPLSR 299
+ ++ ++I+ V+Y + +R LS+
Sbjct: 63 TMQLSKNSKILSVLYNQANLKLVQKRNLSK 92
>UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Thermoplasma acidophilum
Length = 127
Score = 53.2 bits (122), Expect = 5e-06
Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +3
Query: 36 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSV-RSRGGNTKYRALRLDTGNFSWGS 212
++ATGG RKKR++ELGR T+LG + V R+ GGNTK +T N S
Sbjct: 10 KKATGGSLKQSRKKRRFELGREPTLTKLGTKTERKVIRTMGGNTKVILFTAETANVYDAS 69
Query: 213 ECSTRKTRIIDV 248
E +K +II V
Sbjct: 70 EKKIKKAKIITV 81
>UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5;
Archaea|Rep: 30S ribosomal protein S8e - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 125
Score = 52.8 bits (121), Expect = 7e-06
Identities = 27/68 (39%), Positives = 41/68 (60%)
Frame = +3
Query: 36 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 215
R+ +GG+ + K++ E+GR A T +G +R VR+ GGN K RALRL+ S +
Sbjct: 9 RKPSGGRYHTSQGKKRTEIGRAPAETHIGEERRRIVRTFGGNQKVRALRLEYATVSNPAT 68
Query: 216 CSTRKTRI 239
T+KT+I
Sbjct: 69 GETKKTKI 76
>UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_54, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 110
Score = 46.8 bits (106), Expect = 5e-04
Identities = 32/81 (39%), Positives = 45/81 (55%)
Frame = +2
Query: 269 ELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARK 448
ELVRT+TLVKNAI+ Q Y HY L +G KK A T ++ +++ RK
Sbjct: 31 ELVRTQTLVKNAII--------QRYLQHYGLDIGCKKKASTTPRKK----ERKGNHVVRK 78
Query: 449 YLARQRLAKVEGALEEQFHTG 511
RQ+ K++ +EEQF +G
Sbjct: 79 LEKRQQDHKLDPHIEEQFGSG 99
>UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S8e -
Methanopyrus kandleri
Length = 133
Score = 46.0 bits (104), Expect = 8e-04
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Frame = +3
Query: 27 WHKR---RATGGKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTK 167
WH R + TGG+ P RKKRK+E+G P T +G +R + R GGN K
Sbjct: 4 WHGRSLRKPTGGRIRPHRKKRKFEMGNPPTETLVGEERKLKERRGMGGNVK 54
>UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4;
Archaea|Rep: 30S ribosomal protein S8e - Sulfolobus
solfataricus
Length = 133
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +3
Query: 36 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIH-SVRSRGGNTKYRALRLDTGNFSWGS 212
R+ TGG + R KRKYE+G P T L + I R+ GGN K R T N +
Sbjct: 10 RKITGGLKGKHRDKRKYEIGNPPTFTTLSAEDIRIKDRTLGGNFKVRLKYTTTANVLDPA 69
Query: 213 ECSTRKTRIIDVV 251
+ +K +I++++
Sbjct: 70 TNTAKKVKILEIL 82
>UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Uncultured methanogenic archaeon RC-I
Length = 125
Score = 44.4 bits (100), Expect = 0.002
Identities = 24/71 (33%), Positives = 37/71 (52%)
Frame = +3
Query: 36 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSE 215
R+ATGG+ R KRK+ELGR +G Q++ + G +K R L+ D N +
Sbjct: 9 RKATGGRLRLNRSKRKFELGRDFTIPVIGAQKLKVLNVTGNGSKVRVLKSDVVNVTDPKT 68
Query: 216 CSTRKTRIIDV 248
T+K ++ V
Sbjct: 69 GKTQKVKMTTV 79
>UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrococcus
horikoshii
Length = 127
Score = 44.0 bits (99), Expect = 0.003
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 36 RRATGGKRAPIRKKRKYELGRPAANTRLGPQ-RIHSVRSRGGNTKYRALRLDTGNFSWGS 212
++ +GG+ RKKRK ELGR +NTR+ Q + +R+ GGN K R N +
Sbjct: 10 KKPSGGRIVLARKKRKRELGREPSNTRVAEQDKRKIIRTYGGNRKVRLTAAAYANV-FDK 68
Query: 213 ECSTRKTRIIDVV 251
RK RII V+
Sbjct: 69 SGKGRKVRIIRVL 81
>UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3;
Desulfurococcales|Rep: 30S ribosomal protein S8e -
Aeropyrum pernix
Length = 136
Score = 41.1 bits (92), Expect = 0.023
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Frame = +3
Query: 6 MGISRDHWH-KRRATGGKRAPIRK-KRKYELGRPAANTRLG---PQRIHSVRSRGGNTKY 170
MGI + W K++ +GGKR K KRKY GRP T L + VR+RGG+ K
Sbjct: 1 MGIYQ--WRDKKKPSGGKRRYYYKVKRKYAAGRPPTYTTLSAAEEEERKPVRARGGSYKI 58
Query: 171 RALRLDTGNFSWGSECSTRKTRIIDVV 251
+A ++ S RK RI+ +V
Sbjct: 59 KAKKVAFAVVSNPKTGEARKARILRIV 85
>UniRef50_A0RXG5 Cluster: Ribosomal protein S8E; n=2;
Thermoprotei|Rep: Ribosomal protein S8E - Cenarchaeum
symbiosum
Length = 129
Score = 39.1 bits (87), Expect = 0.093
Identities = 22/71 (30%), Positives = 36/71 (50%)
Frame = +3
Query: 39 RATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSEC 218
+ TGG+R P+R +RKYE+ R G Q + + RG TK +D N +
Sbjct: 12 KLTGGRRHPLRTRRKYEIDRYPNEALSGAQETVTRKVRGKRTKTALKTIDFVNLA-VQGA 70
Query: 219 STRKTRIIDVV 251
+K++I+ V+
Sbjct: 71 KVKKSKIVKVL 81
>UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5;
Methanococcus|Rep: 30S ribosomal protein S8e -
Methanococcus maripaludis
Length = 128
Score = 37.1 bits (82), Expect = 0.38
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +3
Query: 33 KRRATGGKRAPIRKKRKYELGRPAANTRLGPQ-RIHSVRSRGGNTKYRALRLDTGN 197
+R +TG K KK K E+GRPAA T++ + + VR RG N K + + + N
Sbjct: 9 RRLSTGAKVWRAAKKHKREMGRPAAETQVSDKIKRKIVRCRGANLKVKLEKTNYAN 64
>UniRef50_Q2W531 Cluster: TPR repeat; n=3; Magnetospirillum|Rep: TPR
repeat - Magnetospirillum magneticum (strain AMB-1 /
ATCC 700264)
Length = 556
Score = 36.7 bits (81), Expect = 0.50
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +3
Query: 42 ATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSR 152
A G +RAP K YE R AA TRL P + ++R R
Sbjct: 268 ALGAERAPANLKANYEKERDAAGTRLSPAELEALRGR 304
>UniRef50_Q8ZTB8 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrobaculum
aerophilum
Length = 131
Score = 36.3 bits (80), Expect = 0.66
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +3
Query: 36 RRATGGKRAPIRKKRKYEL-GRPAANTRLGPQRIHSV-RSRGGNTKYRALRLDTGNFSWG 209
++ +GGK+ +RK +K L G P +LG V R RGGN K R N
Sbjct: 13 KKPSGGKKRKVRKTKKKALGGGPPQIPKLGENDTRIVERVRGGNLKVRLREAKFANVYIP 72
Query: 210 SECSTRKTRIIDVV 251
E + K +II ++
Sbjct: 73 KERKSVKAKIISII 86
>UniRef50_UPI0000DB7956 Cluster: PREDICTED: similar to Deformed
CG2189-PA; n=1; Apis mellifera|Rep: PREDICTED: similar
to Deformed CG2189-PA - Apis mellifera
Length = 284
Score = 34.7 bits (76), Expect = 2.0
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +1
Query: 22 ITGISEGPPVGNVRPYARRGSMS*GVPLQTPGSVLSVSTPFVHVVEILS 168
+TG+ EGPP G + GS+S P +P + L VS P +H I S
Sbjct: 230 VTGMMEGPPGGGPLGHIASGSISPLAPATSPSATLQVSAP-IHPPPIKS 277
>UniRef50_UPI0000F32D0C Cluster: Zinc finger CCCH domain-containing
protein 6.; n=1; Bos taurus|Rep: Zinc finger CCCH
domain-containing protein 6. - Bos Taurus
Length = 770
Score = 34.3 bits (75), Expect = 2.7
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +1
Query: 19 GITGISEGPPVGNVRPYARRGSMS*GVPLQTPGSVLS 129
G S GP G + PYA + S S G+PL TPGSVLS
Sbjct: 595 GAVPSSSGP--GALPPYAPKLSSSTGLPLGTPGSVLS 629
>UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:
CG5899-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 844
Score = 33.9 bits (74), Expect = 3.5
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 257 ASNNELVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRS 430
AS EL KTL K A+ ++D PF W + L R G L A+E +INK+ +
Sbjct: 194 ASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIRMSGDLLNYAQE-LINKQNT 251
>UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 30S ribosomal
protein S8e - Methanosphaera stadtmanae (strain DSM
3091)
Length = 126
Score = 33.5 bits (73), Expect = 4.6
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 36 RRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRA 176
R+ +G + + KR E GR A TR+G + + +RG TK RA
Sbjct: 10 RKPSGARSRRNKNKRNAEFGRNPAETRIGDEVKKEIVARGNCTKTRA 56
>UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 33.1 bits (72), Expect = 6.1
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 392 TEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQF 502
T EE I+NKK S+K +KY ++ AK+ L E F
Sbjct: 105 TPEEEEILNKKHSKKIQKKYEEWKKKAKISLLLREHF 141
>UniRef50_A7D873 Cluster: Exodeoxyribonuclease III Xth; n=2;
Methylobacterium extorquens PA1|Rep:
Exodeoxyribonuclease III Xth - Methylobacterium
extorquens PA1
Length = 344
Score = 33.1 bits (72), Expect = 6.1
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 39 RATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL-DTGNFSWGSE 215
R G+R P+R++ + E RP A+ R P H+ R+R G R L + + F + S
Sbjct: 7 RGLAGRRGPLRRRGRRERLRPLADDR-RPALRHAARARPGGGGGRGLTVCEARRFRYRSG 65
Query: 216 CSTRKTRIIDVVYMHLTMN 272
S ++ I V T N
Sbjct: 66 SSRHASQAIPVRLTVTTWN 84
>UniRef50_Q8TN82 Cluster: Predicted protein; n=1; Methanosarcina
acetivorans|Rep: Predicted protein - Methanosarcina
acetivorans
Length = 90
Score = 33.1 bits (72), Expect = 6.1
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 341 YESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTA-RKYLARQRLAKVEGALEE 496
Y + +TL R + A EA E ++ K +K A K LA+ L K+EG LEE
Sbjct: 31 YRNIWTLNGSRNRSATSKEACEKLLAKNCLRKIACEKLLAKNCLRKIEGLLEE 83
>UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium
japonicum|Rep: Blr7583 protein - Bradyrhizobium
japonicum
Length = 261
Score = 32.7 bits (71), Expect = 8.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 305 IVVVDATPFRQWYESHYTLPLGRKK 379
++ +D PFR+W + TLPLG K
Sbjct: 22 VIAIDGDPFREWQRTSRTLPLGEVK 46
>UniRef50_Q5CW62 Cluster: FH2 domain containing protein; n=2;
Cryptosporidium|Rep: FH2 domain containing protein -
Cryptosporidium parvum Iowa II
Length = 967
Score = 32.7 bits (71), Expect = 8.1
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = -2
Query: 325 SCIYYNNCILDKGLCTHQFIVRCIYTTSMIRVLRVEHSDPQ 203
S I Y N ++G C H F C + S I LR+ HSDPQ
Sbjct: 858 SIIKYPNYFNNQGFCEHNFAEICDNSNS-IYDLRIIHSDPQ 897
>UniRef50_A7F1W3 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 622
Score = 32.7 bits (71), Expect = 8.1
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -2
Query: 295 DKGLCTHQFIVRCIYTTSMIRVLRVEHSDPQEKLPVS 185
D GL + + IY T I +R EH DP++ LP S
Sbjct: 302 DLGLADYNLLFDTIYATPPIARVRSEHEDPRDNLPDS 338
>UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 620
Score = 32.7 bits (71), Expect = 8.1
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2
Query: 320 ATPFRQWYESHYTLPLGRKKGAKLTEAE 403
ATPF Q + +HY L RKKG K+ E E
Sbjct: 374 ATPFYQTFLAHYIWQLKRKKGKKMKEDE 401
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,562,281
Number of Sequences: 1657284
Number of extensions: 12840703
Number of successful extensions: 35659
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 34358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35638
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -