Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20709
         (678 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...   172   1e-44
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    25   2.9  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   5.1  
AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450 pr...    24   5.1  
AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.     23   6.7  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   8.9  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score =  172 bits (418), Expect = 1e-44
 Identities = 75/87 (86%), Positives = 84/87 (96%)
 Frame = +1

Query: 1   VKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 180
           VKVVKNKQYFKRYQV+F+RRREGKTDYYARKRL+ QDKNKYNTPK+RLIVRLSN+D+TCQ
Sbjct: 4   VKVVKNKQYFKRYQVRFRRRREGKTDYYARKRLIFQDKNKYNTPKFRLIVRLSNRDITCQ 63

Query: 181 VAYSRIEGDHIVCAAYSHELPRYGVRL 261
           +AY RIEGD IVCAAYSHELPRYGV++
Sbjct: 64  IAYRRIEGDRIVCAAYSHELPRYGVKV 90



 Score =  106 bits (254), Expect = 7e-25
 Identities = 53/85 (62%), Positives = 55/85 (64%)
 Frame = +3

Query: 255 KVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDV 434
           KVGLTNYAAAY TG                          EY VEPVD GP AFRCYLDV
Sbjct: 89  KVGLTNYAAAYCTGLLVARRILQKLRLDTLYAGCTDVTGEEYLVEPVDEGPAAFRCYLDV 148

Query: 435 GLARTTTGARVFGAMKGAVDGGLNV 509
           GLARTTTG+RVFGAMKGAVDGGLN+
Sbjct: 149 GLARTTTGSRVFGAMKGAVDGGLNI 173



 Score =  103 bits (246), Expect = 7e-24
 Identities = 43/56 (76%), Positives = 51/56 (91%)
 Frame = +2

Query: 509 PHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKL 676
           PHS+KRFPGY AE+K FNAE+HR HIFGLHVA YMR+LE++DE++FKRQFSKYI L
Sbjct: 174 PHSVKRFPGYSAENKSFNAEMHRDHIFGLHVANYMRTLEEEDEEAFKRQFSKYISL 229


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 11/52 (21%), Positives = 26/52 (50%)
 Frame = +3

Query: 483 GAVDGGLNVLIPSKDSLAMMQNPKSSMLKYTGLTSLVCMLLNT*EVLNRMMR 638
           G   GG N   P+ + L++ +  +    ++    ++VCM L   ++ N +++
Sbjct: 239 GGGSGGFNATDPTMERLSLEEKLRVLFYEFLPYLAIVCMNLVVPQLFNYLVQ 290


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 498 HRQQHPS*LQRHEH 457
           H+QQHP   Q H H
Sbjct: 173 HQQQHPGHSQHHHH 186


>AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450
           protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 334 LTPYTLAQQMSQVMNTMLNLSTMDQEHL 417
           LTP   + +M Q+  TML ++T    HL
Sbjct: 137 LTPTFTSGRMKQMFGTMLQVATELHRHL 164


>AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 229 NKQRTQYGHLQSESRPPGML 170
           +KQ  +Y H   E +PPG L
Sbjct: 152 SKQALKYYHYYLEGQPPGQL 171


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 15/68 (22%), Positives = 32/68 (47%)
 Frame = -1

Query: 273 NLSDQPYTITWQLM*ISSAHNMVTFNPRVGHLACYIFVGETHNQTIFRCVIFVLVLNNEA 94
           +LSD   + TW ++ + +  N+   NP    +  YI +     +T+F  V  +L     +
Sbjct: 191 DLSDYWKSGTWDIIEVPAYLNVYEGNPTETDITFYIII---RRKTLFYTVNLILPTVLIS 247

Query: 93  FTSIIISF 70
           F  +++ +
Sbjct: 248 FLCVLVFY 255


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 709,413
Number of Sequences: 2352
Number of extensions: 14995
Number of successful extensions: 48
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)