Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20707
         (714 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical prote...    25   3.1  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           24   5.4  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          24   5.4  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   7.2  

>AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical protein
           protein.
          Length = 226

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 458 NKSPEEQRDLLLKCASTRC 514
           + SPE   D L KC+ T+C
Sbjct: 141 SSSPEPNLDCLSKCSPTKC 159


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 36  PQILLLREGTDQTQGKPQLVSNINACQLVVDAVRT 140
           P I LLR+  +QT+ + Q  S++    L     RT
Sbjct: 354 PLIALLRQNCEQTRDRMQQTSDLQNRSLAAAQYRT 388


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +2

Query: 62   NGPDAGQAPARLQHQCLSTCCR 127
            +GPD  +    L  QCL   CR
Sbjct: 1038 SGPDRTEPDTLLDEQCLEELCR 1059


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 13/53 (24%), Positives = 25/53 (47%)
 Frame = -3

Query: 673 KATPGTRNESSRAPPEPF*FQSCREAEVECPKTGQHQQQS*RSGPSVDESVSM 515
           K   G  + SSR PP P   +S  + + +  +  ++QQ+  +   S   +V +
Sbjct: 167 KVAGGQPSASSRQPPTPLPRRSSAQPQQQQQQQQRNQQEQEQPRASTSHAVML 219


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 773,877
Number of Sequences: 2352
Number of extensions: 15659
Number of successful extensions: 67
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)