Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20706
(620 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292363-1|CAL23175.2| 347|Tribolium castaneum gustatory recept... 25 0.39
AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory recept... 24 0.89
AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory recept... 23 1.6
AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory recept... 23 1.6
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 23 2.1
EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-toler... 23 2.1
AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 23 2.1
AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 23 2.1
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 22 3.6
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 22 3.6
DQ493452-1|ABF48588.1| 305|Tribolium castaneum hedgehog protein. 21 6.3
>AM292363-1|CAL23175.2| 347|Tribolium castaneum gustatory receptor
candidate 42 protein.
Length = 347
Score = 25.4 bits (53), Expect = 0.39
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = -2
Query: 361 LLFLLHNNTCW--MLNSGFFGSFCLR--QLYFQWLLCQLLYNAVCVY 233
LL L++ W +L G+F + QLYFQ+ L VC++
Sbjct: 123 LLVALYSGYVWTDILGFGYFREYLAEAVQLYFQFYYTYFLCVIVCIF 169
>AM292323-1|CAL23135.2| 587|Tribolium castaneum gustatory receptor
candidate 2 protein.
Length = 587
Score = 24.2 bits (50), Expect = 0.89
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -2
Query: 385 IVLSFQCQLLFLLHNNTCWMLNSGFFGSFCLRQLYFQWLLCQLLYNAVCV 236
++L+F LLF+L + NS L +LYF W L+ VC+
Sbjct: 289 VLLTFASDLLFILIQ----LFNSLRRMRNDLERLYFYWSFALLITRIVCL 334
>AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory receptor
candidate 29 protein.
Length = 429
Score = 23.4 bits (48), Expect = 1.6
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = -2
Query: 385 IVLSFQCQLLFLLHNNTCWMLNSGFFGSFCLRQLYFQWLLCQLLYNAVCV 236
+++SF LLF+L + NS L ++YF W L+ VC+
Sbjct: 291 VLMSFASDLLFILIQ----LFNSLRQMKNNLERIYFYWSFGFLIVRTVCL 336
>AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory receptor
candidate 7 protein.
Length = 429
Score = 23.4 bits (48), Expect = 1.6
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = -2
Query: 385 IVLSFQCQLLFLLHNNTCWMLNSGFFGSFCLRQLYFQWLLCQLLYNAVCV 236
+++SF LLF+L + NS L ++YF W L+ VC+
Sbjct: 291 VLMSFASDLLFILIQ----LFNSLRQMKNNLERIYFYWSFGFLIVRTVCL 336
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 23.0 bits (47), Expect = 2.1
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +1
Query: 364 DTEMTTQSVASQLELQRLHTGRT 432
DT+ T QSV S + LH T
Sbjct: 241 DTKFTEQSVTSTFDFLSLHPAET 263
>EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-tolerant
protein.
Length = 516
Score = 23.0 bits (47), Expect = 2.1
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Frame = -3
Query: 84 KFY*NFNLNR---TPLNVIPRKPKY*IKTVN 1
+ Y N N N+ TP P KP Y +KT N
Sbjct: 423 RVYGNVNENQDCSTPTENSPTKPYYKLKTAN 453
>AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain
transcription factor Fushitarazu protein.
Length = 290
Score = 23.0 bits (47), Expect = 2.1
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +1
Query: 364 DTEMTTQSVASQLELQRLHTGRT 432
DT+ T QSV S + LH T
Sbjct: 241 DTKFTEQSVTSTFDFLSLHPAET 263
>AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein.
Length = 290
Score = 23.0 bits (47), Expect = 2.1
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +1
Query: 364 DTEMTTQSVASQLELQRLHTGRT 432
DT+ T QSV S + LH T
Sbjct: 241 DTKFTEQSVTSTFDFLSLHPAET 263
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 22.2 bits (45), Expect = 3.6
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -3
Query: 270 SCVSSCITPSAYIIPTIVVPVLV 202
SCVS ++ + I P +V+P L+
Sbjct: 548 SCVSRSVSMALSIGPPLVIPFLL 570
Score = 21.0 bits (42), Expect = 8.3
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -2
Query: 331 WMLNSGFFGSFCLRQLYFQWL 269
++L GFF + +YF+WL
Sbjct: 568 FLLFGGFFLNVSSIPIYFKWL 588
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 22.2 bits (45), Expect = 3.6
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -3
Query: 270 SCVSSCITPSAYIIPTIVVPVLV 202
SCVS ++ + I P +V+P L+
Sbjct: 548 SCVSRSVSMALSIGPPLVIPFLL 570
Score = 21.0 bits (42), Expect = 8.3
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -2
Query: 331 WMLNSGFFGSFCLRQLYFQWL 269
++L GFF + +YF+WL
Sbjct: 568 FLLFGGFFLNVSSIPIYFKWL 588
>DQ493452-1|ABF48588.1| 305|Tribolium castaneum hedgehog protein.
Length = 305
Score = 21.4 bits (43), Expect = 6.3
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +3
Query: 423 WTYCTSRNCCHTAETNAVSLSRSYRGC 503
W Y SR H + + S + Y GC
Sbjct: 84 WVYYESRAHIHCSVKSESSQAAKYGGC 110
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,036
Number of Sequences: 336
Number of extensions: 3482
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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