Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20706
         (620 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    24   4.5  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    24   4.5  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    24   4.5  
AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    24   4.5  
AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     23   5.9  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   7.8  

>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 270 SCVSSCITPSAYIIPTIVVPVLV 202
           SC SS I+ +  + P +V+P L+
Sbjct: 573 SCASSSISMALSVGPPVVIPFLI 595


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 270 SCVSSCITPSAYIIPTIVVPVLV 202
           SC SS I+ +  + P +V+P L+
Sbjct: 573 SCASSSISMALSVGPPVVIPFLI 595


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 270 SCVSSCITPSAYIIPTIVVPVLV 202
           SC SS I+ +  + P +V+P L+
Sbjct: 551 SCASSSISMALSVGPPVVIPFLI 573


>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 286 LYFQWLLCQLLYNAVCVYYTN 224
           L  QWL C L ++   +Y TN
Sbjct: 270 LMLQWLTCVLNWSISLIYLTN 290


>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 549 IYPHGSVDKLPYATMGSGSLAA 614
           I P  S   LP+A++GSG  ++
Sbjct: 8   ISPSSSSSSLPFASLGSGKTSS 29


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 415 LHTGRTVPVETAATLLKRML 474
           LHTGR   V+  AT LK ++
Sbjct: 516 LHTGRNAMVKEFATKLKHLV 535


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,338
Number of Sequences: 2352
Number of extensions: 14238
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)