Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20705
(761 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 2.3
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 3.1
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 3.1
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 3.1
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 23 3.1
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 5.4
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 5.4
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 5.4
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 5.4
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 22 7.1
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 21 9.4
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 9.4
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.4 bits (48), Expect = 2.3
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -1
Query: 176 NYRRTTLYVFVTPHNHYYTQNNKVNESFDKL 84
NY+ + + +N+Y NN N ++ KL
Sbjct: 321 NYKYSNYNNYNNNYNNYNNYNNNYNNNYKKL 351
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 23.0 bits (47), Expect = 3.1
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +2
Query: 224 QTHGGPSASLSVQIHYHNLLHSQTSLQWRTNYTL 325
+ H S+ + NL+ +SLQW + +TL
Sbjct: 469 ELHNSSPFSIYSFLERLNLIFMSSSLQWSSTHTL 502
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 23.0 bits (47), Expect = 3.1
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +2
Query: 224 QTHGGPSASLSVQIHYHNLLHSQTSLQWRTNYTL 325
+ H S+ + NL+ +SLQW + +TL
Sbjct: 507 ELHNSSPFSIYSFLERLNLIFMSSSLQWSSTHTL 540
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 23.0 bits (47), Expect = 3.1
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +1
Query: 661 DESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRD 759
+ESV ++RT CL P P + ++ +R+
Sbjct: 615 EESVHSMELRTLPCLLPRPKSENNFASQELSRE 647
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 23.0 bits (47), Expect = 3.1
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +1
Query: 661 DESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRD 759
+ESV ++RT CL P P + ++ +R+
Sbjct: 583 EESVHSMELRTLPCLLPRPKSENNFASQELSRE 615
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.2 bits (45), Expect = 5.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 722 CAGNGFRHFPVLTSHIRTLSSKLPDTI 642
CAG G R VL+ + +L+S L TI
Sbjct: 9 CAGGGGRLSSVLSLSLTSLASSLIFTI 35
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.2 bits (45), Expect = 5.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 722 CAGNGFRHFPVLTSHIRTLSSKLPDTI 642
CAG G R VL+ + +L+S L TI
Sbjct: 9 CAGGGGRLSSVLSLSLTSLASSLIFTI 35
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.2 bits (45), Expect = 5.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 722 CAGNGFRHFPVLTSHIRTLSSKLPDTI 642
CAG G R VL+ + +L+S L TI
Sbjct: 9 CAGGGGRLSSVLSLSLTSLASSLIFTI 35
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.2 bits (45), Expect = 5.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 722 CAGNGFRHFPVLTSHIRTLSSKLPDTI 642
CAG G R VL+ + +L+S L TI
Sbjct: 9 CAGGGGRLSSVLSLSLTSLASSLIFTI 35
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.8 bits (44), Expect = 7.1
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +1
Query: 244 SQLIGPN-SLSQSAPQSNKSSVANE-LYPQIHSRWSYKGCVIGKIQ 375
S L+ P S + A + + NE LY Q W Y VI ++Q
Sbjct: 437 SVLLSPEASKATEAVEFIAEHLRNEDLYIQTREDWKYVAMVIDRLQ 482
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +3
Query: 18 NVLLKSTLN*MKKRDCAKY 74
++L K+TLN + + +C KY
Sbjct: 308 HILQKTTLNMLTQVECYKY 326
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 256 GPNSLSQSAPQSNKSSVANELY 321
GP + S Q+ SSV+++LY
Sbjct: 401 GPGGVPTSVIQAATSSVSDDLY 422
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,575
Number of Sequences: 438
Number of extensions: 5082
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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