Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20705
(761 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 146 1e-35
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 126 2e-29
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 78 6e-15
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 77 1e-14
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 70 2e-12
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 68 8e-12
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 68 8e-12
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 67 1e-11
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 65 6e-11
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 65 6e-11
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 65 6e-11
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 64 7e-11
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 64 7e-11
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 64 7e-11
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 64 7e-11
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 64 1e-10
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 63 2e-10
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 63 2e-10
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 63 2e-10
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 62 4e-10
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 62 5e-10
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 62 5e-10
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 62 5e-10
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 61 7e-10
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 61 9e-10
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 61 9e-10
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 60 1e-09
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 60 1e-09
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 60 1e-09
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 60 2e-09
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 60 2e-09
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 60 2e-09
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 59 3e-09
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 59 3e-09
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 59 3e-09
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 59 3e-09
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 59 3e-09
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 59 4e-09
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 59 4e-09
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 59 4e-09
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 59 4e-09
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 59 4e-09
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 58 5e-09
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 58 8e-09
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 58 8e-09
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 57 1e-08
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 56 3e-08
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 56 3e-08
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 55 4e-08
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 55 4e-08
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 55 4e-08
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 55 6e-08
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 55 6e-08
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 55 6e-08
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 55 6e-08
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 54 8e-08
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 54 8e-08
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 54 1e-07
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 54 1e-07
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 54 1e-07
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 54 1e-07
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 54 1e-07
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 54 1e-07
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 54 1e-07
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 54 1e-07
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 53 2e-07
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 53 2e-07
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 53 2e-07
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 52 3e-07
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 52 3e-07
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 52 4e-07
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 51 7e-07
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 50 1e-06
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 50 1e-06
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 50 2e-06
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 50 2e-06
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 49 3e-06
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 41 3e-06
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 49 4e-06
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 48 5e-06
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 48 5e-06
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 48 5e-06
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 48 7e-06
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 48 7e-06
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 40 7e-06
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 40 7e-06
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 48 9e-06
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 48 9e-06
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 48 9e-06
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 48 9e-06
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 48 9e-06
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 48 9e-06
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 47 1e-05
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 47 2e-05
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 47 2e-05
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 47 2e-05
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 47 2e-05
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 47 2e-05
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 47 2e-05
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 47 2e-05
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 46 2e-05
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 46 2e-05
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 46 3e-05
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 46 3e-05
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 46 3e-05
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 46 3e-05
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 46 3e-05
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 46 4e-05
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 46 4e-05
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 46 4e-05
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 45 6e-05
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 45 6e-05
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 45 6e-05
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 45 6e-05
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 44 8e-05
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 44 1e-04
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 44 1e-04
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 44 1e-04
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 44 1e-04
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 44 1e-04
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 44 1e-04
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 43 2e-04
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 43 2e-04
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 43 2e-04
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 43 2e-04
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 43 2e-04
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 43 3e-04
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 43 3e-04
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 43 3e-04
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 43 3e-04
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 42 3e-04
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 42 3e-04
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 42 3e-04
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 42 4e-04
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 42 4e-04
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 42 6e-04
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 42 6e-04
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 42 6e-04
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 42 6e-04
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 42 6e-04
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 41 8e-04
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 41 8e-04
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 41 8e-04
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 41 8e-04
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 41 8e-04
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 41 0.001
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 41 0.001
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 40 0.001
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 40 0.001
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 40 0.001
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 40 0.001
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 40 0.002
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 40 0.002
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 40 0.002
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 40 0.002
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 40 0.002
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 40 0.002
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 39 0.003
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 39 0.004
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 39 0.004
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 39 0.004
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 39 0.004
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 39 0.004
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 38 0.006
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 38 0.007
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 38 0.007
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 38 0.010
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 38 0.010
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea... 38 0.010
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 38 0.010
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 38 0.010
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 38 0.010
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 37 0.013
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 37 0.013
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 37 0.013
At4g21530.1 68417.m03111 transducin family protein / WD-40 repea... 37 0.013
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 37 0.013
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 37 0.013
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 37 0.013
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 37 0.017
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 36 0.029
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 36 0.029
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 36 0.039
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 36 0.039
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 35 0.051
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 35 0.051
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 35 0.068
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 35 0.068
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 34 0.090
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 34 0.090
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 34 0.090
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 34 0.12
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 34 0.12
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 34 0.12
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 34 0.12
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 33 0.16
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 33 0.16
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 33 0.21
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 33 0.21
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 33 0.21
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 33 0.21
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 33 0.21
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 31 0.63
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 31 0.63
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 31 0.63
At3g26480.1 68416.m03301 transducin family protein / WD-40 repea... 31 0.63
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 31 0.84
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 31 0.84
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 31 1.1
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 30 1.5
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 30 1.5
At5g65750.1 68418.m08274 2-oxoglutarate dehydrogenase E1 compone... 30 1.9
At1g69400.2 68414.m07968 transducin family protein / WD-40 repea... 30 1.9
At1g69400.1 68414.m07969 transducin family protein / WD-40 repea... 30 1.9
At1g58227.1 68414.m06616 hypothetical protein 30 1.9
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 30 1.9
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 29 3.4
At2g46560.1 68415.m05808 transducin family protein / WD-40 repea... 29 3.4
At1g64350.1 68414.m07292 transducin family protein / WD-40 repea... 29 3.4
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 29 3.4
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 29 4.5
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 29 4.5
At3g52030.1 68416.m05707 F-box family protein / WD-40 repeat fam... 29 4.5
At5g51270.1 68418.m06356 protein kinase family protein contains ... 28 5.9
At5g19920.1 68418.m02370 transducin family protein / WD-40 repea... 28 5.9
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 28 5.9
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 28 5.9
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 28 7.8
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 28 7.8
At1g45160.1 68414.m05177 protein kinase family protein contains ... 28 7.8
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 146 bits (354), Expect = 1e-35
Identities = 64/83 (77%), Positives = 73/83 (87%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
R IVSASDDKTLK+W++ +G +KTL GH+NY FC NFNPQSN+IVSGSFDE+VRIWDV
Sbjct: 84 RFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVT 143
Query: 691 TGKCLKPLPAHSDPVSAVHFNRD 759
TGKCLK LPAHSDPV+AV FNRD
Sbjct: 144 TGKCLKVLPAHSDPVTAVDFNRD 166
Score = 79.8 bits (188), Expect = 2e-15
Identities = 38/81 (46%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
+IVS S D+T+++W++++GKCLK L HS+ V +FN +LIVS S+D RIWD T
Sbjct: 127 MIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGT 186
Query: 694 GKCLKPL-PAHSDPVSAVHFN 753
G C+K L + PVS V F+
Sbjct: 187 GHCVKTLIDDENPPVSFVRFS 207
Score = 58.8 bits (136), Expect = 4e-09
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
IVS S+D + +WEL+S K L+ L+GH+ V +P NLI SGS D++VRIW
Sbjct: 258 IVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 57.6 bits (133), Expect = 8e-09
Identities = 34/72 (47%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Frame = +2
Query: 311 TNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDGKFEKTI---SGHK 475
T Y TL H +AVSSVKFS +G LAS+SADK I+ + + + + +GH+
Sbjct: 12 TPYVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHE 71
Query: 476 MGISDVAWSSDA 511
GISDVA+SSDA
Sbjct: 72 NGISDVAFSSDA 83
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSS-----GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 675
RL+ SAS DKT++ + +++ + ++ GH N + F+ + IVS S D++++
Sbjct: 37 RLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSASDDKTLK 96
Query: 676 IWDVRTGKCLKPLPAHSDPVSAVHFN 753
+WDV TG +K L H++ V+FN
Sbjct: 97 LWDVETGSLIKTLIGHTNYAFCVNFN 122
Score = 56.4 bits (130), Expect = 2e-08
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCN--FN-PQSNLIVSGSFDESVRIW 681
+ I+ + D TL++W +SS K LKT GH N +C + F+ IVSGS D V +W
Sbjct: 211 KFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMW 270
Query: 682 DVRTGKCLKPLPAHSDPVSAV 744
++ + K L+ L H++ V V
Sbjct: 271 ELNSKKLLQKLEGHTETVMNV 291
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIWDVR 690
LIVS+S D ++W+ +G C+KTL N V F+P I+ G+ D ++R+W++
Sbjct: 169 LIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNIS 228
Query: 691 TGKCLKPLPAH 723
+ K LK H
Sbjct: 229 SAKFLKTYTGH 239
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +2
Query: 311 TNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 472
T + +K + VS V+FSPNG+++ + D +++W KF KT +GH
Sbjct: 186 TGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGH 239
Score = 42.7 bits (96), Expect = 3e-04
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 472
GH +S V FS + ++ S+S DK +K+W G KT+ GH
Sbjct: 69 GHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGH 112
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
TL GHT V F+P + S S D+ ++IW GK K + H ++ V ++ D
Sbjct: 108 TLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRD 166
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI 463
L H+ V++V F+ +G + SSS D L +IW + G KT+
Sbjct: 151 LPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTL 193
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
L GHT+ V +V P +AS S DK ++IW
Sbjct: 281 LEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +2
Query: 332 TLAGHTKA---VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVA 496
T GH A +SS NG+ + S S D + +W K + + GH + +VA
Sbjct: 235 TYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVA 292
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 126 bits (303), Expect = 2e-29
Identities = 53/80 (66%), Positives = 69/80 (86%), Gaps = 1/80 (1%)
Frame = +1
Query: 523 SASDDKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 699
SASDD TL++W+ S +CLK L+GH+N+VFC NFNP SNLIVSGSFDE++RIW+V+TGK
Sbjct: 102 SASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGK 161
Query: 700 CLKPLPAHSDPVSAVHFNRD 759
C++ + AHS P+S+VHFNRD
Sbjct: 162 CVRMIKAHSMPISSVHFNRD 181
Score = 76.2 bits (179), Expect = 2e-14
Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
LIVS S D+T+++WE+ +GKC++ +K HS + +FN +LIVS S D S +IWD +
Sbjct: 142 LIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKE 201
Query: 694 GKCLKPLPAHSDP-VSAVHFN 753
G CLK L P VS F+
Sbjct: 202 GTCLKTLIDDKSPAVSFAKFS 222
Score = 66.1 bits (154), Expect = 2e-11
Identities = 31/60 (51%), Positives = 39/60 (65%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDA 511
TL GHT A+S VKFS +G LAS+S DK + +W A + GH GISD+AWSSD+
Sbjct: 38 TLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDS 97
Score = 56.4 bits (130), Expect = 2e-08
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCN--FN-PQSNLIVSGSFDESVRIW 681
+ I+ A+ D TLK+ ++GK LK GH+N VFC F+ IVSGS D V +W
Sbjct: 226 KFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLW 285
Query: 682 DVRTGKCLKPLPAHSDPVSAV 744
D++ L+ L H+D V +V
Sbjct: 286 DLQARNILQRLEGHTDAVISV 306
Score = 54.4 bits (125), Expect = 8e-08
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
L+ SAS DKT+ +W ++ + +GHS+ + ++ S+ S S D ++RIWD R+
Sbjct: 57 LLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARS 116
Query: 694 G-KCLKPLPAHSDPVSAVHFN 753
+CLK L H++ V V+FN
Sbjct: 117 PYECLKVLRGHTNFVFCVNFN 137
Score = 54.0 bits (124), Expect = 1e-07
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
LIVSAS D + K+W+ G CLKTL S V F+P I+ + D ++++ +
Sbjct: 184 LIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYA 243
Query: 691 TGKCLKPLPAHSDPVSAV 744
TGK LK H++ V +
Sbjct: 244 TGKFLKVYTGHTNKVFCI 261
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/67 (37%), Positives = 33/67 (49%)
Frame = +2
Query: 308 RTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGIS 487
R+ Y L GHT V V F+P + S S D+ I+IW GK + I H M IS
Sbjct: 115 RSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPIS 174
Query: 488 DVAWSSD 508
V ++ D
Sbjct: 175 SVHFNRD 181
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS--FDESVRIW 681
+ IVS S+D + +W+L + L+ L+GH++ V + +P N I S D+++RIW
Sbjct: 271 KYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +1
Query: 577 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNR 756
LKTL+GH+ + C F+ NL+ S S D+++ +W + HS +S + ++
Sbjct: 36 LKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSS 95
Query: 757 D 759
D
Sbjct: 96 D 96
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +2
Query: 323 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 472
LK + + AVS KFSPNG+++ ++ D +K+ GKF K +GH
Sbjct: 205 LKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGH 254
Score = 36.3 bits (80), Expect = 0.022
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +2
Query: 290 QTSLQWR-TNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTI 463
+T + W TNY+L GH+ +S + +S + + S+S D ++IW A + K +
Sbjct: 65 KTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVL 124
Query: 464 SGH 472
GH
Sbjct: 125 RGH 127
Score = 36.3 bits (80), Expect = 0.022
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDAG 514
+ H+ +SSV F+ +G + S+S D KIW A +G KT+ K A S G
Sbjct: 166 IKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNG 225
Query: 515 *LSVLVTI 538
++ T+
Sbjct: 226 KFILVATL 233
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 78.2 bits (184), Expect = 6e-15
Identities = 31/68 (45%), Positives = 47/68 (69%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
IVSASDD+T+++W S C+ L GH++YV C +F+P+ +L+VS S D++VR+WD+
Sbjct: 108 IVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGAL 167
Query: 697 KCLKPLPA 720
K PA
Sbjct: 168 KKKSASPA 175
Score = 64.5 bits (150), Expect = 7e-11
Identities = 29/80 (36%), Positives = 46/80 (57%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
L VS DD +KVW + +CL TL GH +Y+ F+ ++ IVS S D+++RIW+ ++
Sbjct: 65 LFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQS 124
Query: 694 GKCLKPLPAHSDPVSAVHFN 753
C+ L H+ V F+
Sbjct: 125 RTCISVLTGHNHYVMCASFH 144
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKC--LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
LIVS +DD+ +K+W ++ K + TL+GH N V F+ + ++IVS S D+S+R+WD
Sbjct: 218 LIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDA 277
Query: 688 --RTG 696
RTG
Sbjct: 278 TKRTG 282
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/84 (25%), Positives = 40/84 (47%)
Frame = +1
Query: 508 RRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
R I+++ +++W+ G + H V +F+ L VSG D +++W+
Sbjct: 21 RPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNY 80
Query: 688 RTGKCLKPLPAHSDPVSAVHFNRD 759
+T +CL L H D + V F+ +
Sbjct: 81 KTHRCLFTLLGHLDYIRTVQFHHE 104
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 329 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 472
FTL GH + +V+F W+ S+S D+ I+IW ++GH
Sbjct: 87 FTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGH 134
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +2
Query: 305 WRTNYTLKF---TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA 436
WR N T + TL GH VSSV F + + S+S DK I++W A
Sbjct: 231 WRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDA 277
Score = 37.5 bits (83), Expect(2) = 7e-05
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 586 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC--LKPLPAHSDPVSAVHFN 753
L+GH V +F+P LIVSG+ D V++W + K + L H + VS+V F+
Sbjct: 200 LEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFH 257
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 598 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFN 753
SN V +F+P+ I++ +++WD R G + H PV VHF+
Sbjct: 9 SNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH 60
Score = 35.1 bits (77), Expect = 0.051
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +2
Query: 323 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FE-KTISGHKMGISDV 493
+K+ L GH + V+ F P + S + D+ +K+W + K +E T+ GH +S V
Sbjct: 196 VKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSV 254
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/47 (27%), Positives = 29/47 (61%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 654
+IVS S+DK+++VW+ + ++T + + + +P+ NL+ +G
Sbjct: 262 IIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHPEINLLAAG 308
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Frame = +2
Query: 254 SVQIHYHN-----LLHSQTSLQWR-TNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADK 415
+VQ H+ N QT W + T L GH V F P + + S+S D+
Sbjct: 98 TVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQ 157
Query: 416 LIKIW 430
+++W
Sbjct: 158 TVRVW 162
Score = 26.2 bits (55), Expect(2) = 7e-05
Identities = 10/20 (50%), Positives = 17/20 (85%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGK 573
L+VSAS D+T++VW++ + K
Sbjct: 149 LVVSASLDQTVRVWDIGALK 168
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 77.0 bits (181), Expect = 1e-14
Identities = 28/57 (49%), Positives = 44/57 (77%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
IVSASDD+T+++W S C+ L GH++YV C +F+P+ +L+VS S D++VR+WD+
Sbjct: 108 IVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/80 (36%), Positives = 45/80 (56%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
L VS DD +KVW + +CL TL GH +Y+ F+ + IVS S D+++RIW+ ++
Sbjct: 65 LFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124
Query: 694 GKCLKPLPAHSDPVSAVHFN 753
C+ L H+ V F+
Sbjct: 125 RTCVSVLTGHNHYVMCASFH 144
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKC--LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
LIVS +DD+ +K+W ++ K + TL+GH N V F+ + ++IVS S D+S+R+WD
Sbjct: 218 LIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDA 277
Query: 688 --RTG 696
RTG
Sbjct: 278 TKRTG 282
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/84 (23%), Positives = 39/84 (46%)
Frame = +1
Query: 508 RRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
R I+++ +++W+ G + H V +F+ L VSG D +++W+
Sbjct: 21 RPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNY 80
Query: 688 RTGKCLKPLPAHSDPVSAVHFNRD 759
+ +CL L H D + V F+ +
Sbjct: 81 KNHRCLFTLLGHLDYIRTVQFHHE 104
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 314 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 472
N+ FTL GH + +V+F W+ S+S D+ I+IW ++GH
Sbjct: 82 NHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGH 134
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +2
Query: 305 WRTNYTLKF---TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA 436
WR N T + TL GH VSSV F + + S+S DK I++W A
Sbjct: 231 WRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDA 277
Score = 36.3 bits (80), Expect = 0.022
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 586 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC--LKPLPAHSDPVSAVHFN 753
L+GH V F+P LIVSG+ D V++W + K + L H + VS+V F+
Sbjct: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFH 257
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 598 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFN 753
SN V +F+P+ I++ +++WD R G + H PV VHF+
Sbjct: 9 SNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH 60
Score = 34.7 bits (76), Expect = 0.068
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +2
Query: 323 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FE-KTISGHKMGISDV 493
+K+ L GH + V+ F P + S + D+ +K+W + K +E T+ GH +S V
Sbjct: 196 VKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSV 254
Score = 34.7 bits (76), Expect = 0.068
Identities = 14/47 (29%), Positives = 29/47 (61%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 654
+IVS S+DK+++VW+ + L+T + + + +P+ NL+ +G
Sbjct: 262 IIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVHPEMNLLAAG 308
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 305 WRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
W++ T L GH V F P + + S+S D+ +++W
Sbjct: 122 WQSR-TCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 69.7 bits (163), Expect = 2e-12
Identities = 27/79 (34%), Positives = 42/79 (53%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
+ S S D LK+W++ C++T KGHS + F P +VSG D V++WD+ G
Sbjct: 115 LASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAG 174
Query: 697 KCLKPLPAHSDPVSAVHFN 753
K L H P+ ++ F+
Sbjct: 175 KLLHEFKFHEGPIRSLDFH 193
Score = 60.1 bits (139), Expect = 2e-09
Identities = 22/82 (26%), Positives = 43/82 (52%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
L+++ + +K+W++ K ++ GH + F+P + SGS D +++IWD+R
Sbjct: 72 LVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRK 131
Query: 694 GKCLKPLPAHSDPVSAVHFNRD 759
C++ HS +S + F D
Sbjct: 132 KGCIQTYKGHSRGISTIRFTPD 153
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/83 (31%), Positives = 45/83 (54%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
R +VS D +KVW+L++GK L K H + +F+P L+ +GS D +V+ WD+
Sbjct: 155 RWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWDLE 214
Query: 691 TGKCLKPLPAHSDPVSAVHFNRD 759
T + + + V ++ F+ D
Sbjct: 215 TFELIGSTRPEATGVRSIKFHPD 237
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/81 (27%), Positives = 41/81 (50%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
RL ++ DD + +W + L +L GH++ V F+ L+++G+ +++WDV
Sbjct: 29 RLFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVE 88
Query: 691 TGKCLKPLPAHSDPVSAVHFN 753
K ++ H SAV F+
Sbjct: 89 EAKMVRAFTGHRSNCSAVEFH 109
Score = 47.6 bits (108), Expect = 9e-06
Identities = 23/56 (41%), Positives = 32/56 (57%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
GH S+V+F P GE+LAS S+D +KIW +T GH GIS + ++ D
Sbjct: 98 GHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPD 153
Score = 46.0 bits (104), Expect = 3e-05
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 475
T GH++ +S+++F+P+G W+ S D ++K+W GK H+
Sbjct: 137 TYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHE 184
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +2
Query: 320 TLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDV 493
T +L GHT AV SV F + + ++ +IK+W + K + +GH+ S V
Sbjct: 49 TSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAV 106
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/56 (23%), Positives = 31/56 (55%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
L+ + S D+T+K W+L + + + + + + V F+P + G D+S++++
Sbjct: 198 LLATGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDGRTLFCG-LDDSLKVY 252
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 67.7 bits (158), Expect = 8e-12
Identities = 30/81 (37%), Positives = 53/81 (65%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
I SAS DK++++W +G+ + +GH V+ +++ S L++SGS D +++IW++RT
Sbjct: 375 IASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTK 434
Query: 697 KCLKPLPAHSDPVSAVHFNRD 759
K + LP H+D V AV ++ D
Sbjct: 435 KLKQDLPGHADEVFAVDWSPD 455
Score = 61.7 bits (143), Expect = 5e-10
Identities = 25/62 (40%), Positives = 39/62 (62%)
Frame = +2
Query: 326 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS 505
K L GH + V+ V FSP+G+W+AS+S DK +++W G+F GH + V+WS+
Sbjct: 353 KKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSA 412
Query: 506 DA 511
D+
Sbjct: 413 DS 414
Score = 58.0 bits (134), Expect = 6e-09
Identities = 27/59 (45%), Positives = 35/59 (59%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
T+AGH +AV V FSP+G+ LAS S D +++W Y T GHK + VAWS D
Sbjct: 104 TIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPD 162
Score = 58.0 bits (134), Expect = 6e-09
Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKC-LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
+VS SDD T+ +WE S K K L GH V F+P I S SFD+SVR+W+ T
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGIT 391
Query: 694 GKCLKPLPAHSDPVSAVHFNRD 759
G+ + H PV V ++ D
Sbjct: 392 GQFVTVFRGHVGPVYQVSWSAD 413
Score = 55.6 bits (128), Expect = 3e-08
Identities = 22/57 (38%), Positives = 37/57 (64%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
RL++S S D TLK+WE+ + K + L GH++ VF +++P +VSG D +++W
Sbjct: 415 RLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 49.2 bits (112), Expect = 3e-06
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +1
Query: 571 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHF 750
+C +T+ GH+ V C +F+P + SGS D +VR+WD+ T L H + V V +
Sbjct: 100 RCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAW 159
Query: 751 NRD 759
+ D
Sbjct: 160 SPD 162
Score = 47.6 bits (108), Expect = 9e-06
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
+ S S D T+++W+L + L T KGH N+V ++P +VSGS + W+ + G
Sbjct: 124 LASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKG 183
Query: 697 KCL-KPLPAHSDPVSAV 744
+ PL H ++ +
Sbjct: 184 ELEGSPLTGHKKWITGI 200
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/78 (25%), Positives = 43/78 (55%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
R V++S D ++W+++ K + L GH+ V C + +I +GS D ++++W+
Sbjct: 212 RRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWG-GDGIIYTGSQDCTIKMWETT 270
Query: 691 TGKCLKPLPAHSDPVSAV 744
GK ++ L H ++++
Sbjct: 271 QGKLIRELKGHGHWINSL 288
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 329 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKMGISDVAW 499
FT GH V +V +SP+G+ L S S I W G+ E ++GHK I+ ++W
Sbjct: 145 FTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISW 202
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/54 (31%), Positives = 34/54 (62%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 675
+I + S D T+K+WE + GK ++ LKGH +++ + + ++ +G+FD + R
Sbjct: 254 IIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTE-YVLRTGAFDHTGR 306
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/58 (36%), Positives = 34/58 (58%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
L+GHT AV+ VK+ +G + + S D IK+W GK + + GH I+ +A S++
Sbjct: 237 LSGHTLAVTCVKWGGDGI-IYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTE 293
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
GH V V +S + L S S D +KIW K ++ + GH + V WS D
Sbjct: 400 GHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPD 455
Score = 36.3 bits (80), Expect = 0.022
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 323 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
LK L GH V +V +SP+GE + S D+++K+W
Sbjct: 436 LKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNG-----EWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW 499
L GH K ++ + + P +SS D +IW K +SGH + ++ V W
Sbjct: 190 LTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKW 249
Query: 500 SSD 508
D
Sbjct: 250 GGD 252
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 67.7 bits (158), Expect = 8e-12
Identities = 26/79 (32%), Positives = 42/79 (53%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
+ S S D L+VW+ C++T KGH+ + F+P +VSG D V++WD+ G
Sbjct: 64 LASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAG 123
Query: 697 KCLKPLPAHSDPVSAVHFN 753
K L H P+ ++ F+
Sbjct: 124 KLLHEFKCHEGPIRSLDFH 142
Score = 60.1 bits (139), Expect = 2e-09
Identities = 22/82 (26%), Positives = 43/82 (52%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
L+++ + +K+W+L K ++ GH + F+P + SGS D ++R+WD R
Sbjct: 21 LVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRK 80
Query: 694 GKCLKPLPAHSDPVSAVHFNRD 759
C++ H+ +S + F+ D
Sbjct: 81 KGCIQTYKGHTRGISTIEFSPD 102
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/83 (32%), Positives = 45/83 (54%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
R +VS D +KVW+L++GK L K H + +F+P L+ +GS D +V+ WD+
Sbjct: 104 RWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLE 163
Query: 691 TGKCLKPLPAHSDPVSAVHFNRD 759
T + + + V A+ F+ D
Sbjct: 164 TFELIGTTRPEATGVRAIAFHPD 186
Score = 48.4 bits (110), Expect = 5e-06
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 475
T GHT+ +S+++FSP+G W+ S D ++K+W GK H+
Sbjct: 86 TYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHE 133
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
GH S+V+F P GE+LAS S+D +++W +T GH GIS + +S D
Sbjct: 47 GHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPD 102
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 583 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFN 753
+L GH++ V FN + L+++G+ +++WD+ K ++ H SAV F+
Sbjct: 2 SLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFH 58
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDV 493
+L GHT V SV F+ + + ++ +IK+W + K + +GH+ S V
Sbjct: 2 SLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAV 55
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/56 (23%), Positives = 30/56 (53%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
L+ + S D+T+K W+L + + + T + + V F+P + G D+ ++++
Sbjct: 147 LLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCG-LDDGLKVY 201
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +2
Query: 344 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
H + S+ F P LA+ SAD+ +K W + T G+ +A+ D
Sbjct: 132 HEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPD 186
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 66.9 bits (156), Expect = 1e-11
Identities = 28/76 (36%), Positives = 45/76 (59%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
+++AS DKT+K+W +S G CLKT +GH++ V +F VS D +++W+V T
Sbjct: 556 VMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTS 615
Query: 697 KCLKPLPAHSDPVSAV 744
+C+ H D V A+
Sbjct: 616 ECIATYDQHEDKVWAL 631
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/82 (31%), Positives = 42/82 (51%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
L+ + S+D+T +W L + TLKGH +F F+ +++ S D++V+IW +
Sbjct: 513 LVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISD 572
Query: 694 GKCLKPLPAHSDPVSAVHFNRD 759
G CLK H+ V F D
Sbjct: 573 GSCLKTFEGHTSSVLRASFITD 594
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS--NLIVSGSFDESVRIWDV 687
L+ +A D+ + VW++ G C +GH V F+P S N+++SGS D +VR+WD+
Sbjct: 116 LLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDL 175
Query: 688 RT----GKCLKPLPAHSDPVSAVHFNRD 759
KCL + H V+++ + D
Sbjct: 176 NAKNTEKKCLAIMEKHFSAVTSIALSED 203
Score = 56.0 bits (129), Expect = 3e-08
Identities = 25/83 (30%), Positives = 42/83 (50%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
+L+ SA + ++VW+L + KC+++ KGH V + L+ + D V +WDV
Sbjct: 73 KLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVD 132
Query: 691 TGKCLKPLPAHSDPVSAVHFNRD 759
G C H VS++ F+ D
Sbjct: 133 GGFCTHYFRGHKGVVSSILFHPD 155
Score = 47.6 bits (108), Expect = 9e-06
Identities = 21/59 (35%), Positives = 33/59 (55%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
TL GH + + SV+FS + + ++S DK +KIW DG KT GH + ++ +D
Sbjct: 536 TLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITD 594
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDV 687
LIV+ S DKT+++W +S C+ GH+ + F +S + VSGS D ++++W +
Sbjct: 418 LIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSL 476
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/83 (26%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFC---CNFNPQSNLIVSGSFDESVRIW 681
+ + A++ + ++V+++++ C L GH V C + + LIV+GS D++VR+W
Sbjct: 372 QFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLW 431
Query: 682 DVRTGKCLKPLPAHSDPVSAVHF 750
+ + C+ H+ + AV F
Sbjct: 432 NATSKSCIGVGTGHNGDILAVAF 454
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = +1
Query: 508 RRLIVSASDDKTLKVWELSS----GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 675
+ +++S SDD T++VW+L++ KCL ++ H + V + + S D+ V
Sbjct: 158 KNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVN 217
Query: 676 IWDVRTGKC 702
+WD+ C
Sbjct: 218 LWDLHDYSC 226
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 583 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPV 735
T++G S+ + +P L+ S +R+WD+ T KC++ H PV
Sbjct: 55 TIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPV 105
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +1
Query: 520 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
VS D LK+W +++ +C+ T H + V+ ++ +I +G D + +W
Sbjct: 599 VSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLW 652
Score = 35.9 bits (79), Expect = 0.029
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +2
Query: 314 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDV 493
N + +A H K ++SV + N + + S D+ IW D T+ GHK I V
Sbjct: 488 NLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSV 547
Query: 494 AWSS 505
+S+
Sbjct: 548 EFST 551
Score = 33.1 bits (72), Expect = 0.21
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +2
Query: 344 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKM 478
H AV+S+ S +G L S+ DK++ +W +D + T++ +++
Sbjct: 191 HFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYSCKATVATYEV 235
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/71 (22%), Positives = 38/71 (53%)
Frame = +2
Query: 311 TNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISD 490
T+ ++K T+ G + ++++ SP+ + L S+ + I++W K ++ GH+ +
Sbjct: 48 TDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMG 107
Query: 491 VAWSSDAG*LS 523
+A + G L+
Sbjct: 108 MACHASGGLLA 118
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/61 (29%), Positives = 25/61 (40%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDA 511
T GHT +V F +G S AD L+K+W + T H+ D W+
Sbjct: 578 TFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHE----DKVWALAV 633
Query: 512 G 514
G
Sbjct: 634 G 634
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDA 511
GH V + +G LA++ AD+ + +W G GHK +S + + D+
Sbjct: 100 GHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDS 156
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +2
Query: 329 FTLAGHTKAVSSVK--FSPNGEWL-ASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW 499
+ LAGH + V S+ S +G L + S DK +++W A +GH I VA+
Sbjct: 395 YVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAF 454
Query: 500 S 502
+
Sbjct: 455 A 455
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 64.9 bits (151), Expect = 6e-11
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 8/91 (8%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKG--------HSNYVFCCNFNPQSNLIVSGSFDE 666
+ + S+S D ++VW+ SGK K L+ H + V C +F+ S ++ SGS D
Sbjct: 226 QFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASGSQDG 285
Query: 667 SVRIWDVRTGKCLKPLPAHSDPVSAVHFNRD 759
++IW +RTG C++ AHS V+++ F+RD
Sbjct: 286 KIKIWRIRTGVCIRRFDAHSQGVTSLSFSRD 316
Score = 58.0 bits (134), Expect = 6e-09
Identities = 25/82 (30%), Positives = 45/82 (54%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
++ S S D +K+W + +G C++ HS V +F+ + ++S SFD++ RI +++
Sbjct: 277 MLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKS 336
Query: 694 GKCLKPLPAHSDPVSAVHFNRD 759
GK LK H+ V+ F D
Sbjct: 337 GKLLKEFRGHTSYVNHAIFTSD 358
Score = 54.4 bits (125), Expect = 8e-08
Identities = 24/64 (37%), Positives = 40/64 (62%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
++S S D+T ++ L SGK LK +GH++YV F + I++ S D +V++WD +T
Sbjct: 320 LLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTT 379
Query: 697 KCLK 708
CL+
Sbjct: 380 DCLQ 383
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = +2
Query: 317 YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI 463
+T+KF H + +FSP+G++LASSS D I++W GK +K +
Sbjct: 206 HTIKFGKKSHAECA---RFSPDGQFLASSSVDGFIEVWDYISGKLKKDL 251
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 9/68 (13%)
Frame = +1
Query: 583 TLK-GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLP--------AHSDPV 735
T+K G ++ C F+P + S S D + +WD +GK K L H DPV
Sbjct: 207 TIKFGKKSHAECARFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPV 266
Query: 736 SAVHFNRD 759
+ F+RD
Sbjct: 267 LCIDFSRD 274
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +2
Query: 344 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
H V + FS + E LAS S D IKIW G + H G++ +++S D
Sbjct: 262 HDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRD 316
Score = 31.1 bits (67), Expect = 0.84
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLK 591
I++AS D T+KVW+ + CL+T K
Sbjct: 362 IITASSDCTVKVWDSKTTDCLQTFK 386
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
GHT V+ F+ +G + ++S+D +K+W
Sbjct: 345 GHTSYVNHAIFTSDGSRIITASSDCTVKVW 374
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 64.9 bits (151), Expect = 6e-11
Identities = 28/82 (34%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDV 687
R + S D T+K+ + +GKCLK L GH + F+P+ S ++ SGS D VR+W+
Sbjct: 116 RTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNA 175
Query: 688 RTGKCLKPLPAHSDPVSAVHFN 753
+TG+C++ + P++++ F+
Sbjct: 176 KTGECIRTHDFYR-PIASIAFH 196
Score = 31.5 bits (68), Expect = 0.63
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 622 FNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFN 753
F+ + S D +V+I D TGKCLK L H V F+
Sbjct: 111 FSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFH 154
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 350 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 475
++ + FS +G LAS+ D +KI GK K ++GH+
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHR 145
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 64.9 bits (151), Expect = 6e-11
Identities = 28/82 (34%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDV 687
R + S D T+K+ + +GKCLK L GH + F+P+ S ++ SGS D VR+W+
Sbjct: 116 RTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNA 175
Query: 688 RTGKCLKPLPAHSDPVSAVHFN 753
+TG+C++ + P++++ F+
Sbjct: 176 KTGECIRTHDFYR-PIASIAFH 196
Score = 31.5 bits (68), Expect = 0.63
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 622 FNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFN 753
F+ + S D +V+I D TGKCLK L H V F+
Sbjct: 111 FSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFH 154
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 350 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 475
++ + FS +G LAS+ D +KI GK K ++GH+
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHR 145
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 64.5 bits (150), Expect = 7e-11
Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDV 687
++S+S DKT+++W+LSS CLK HS+YV C FNP N +SGS D VRIW +
Sbjct: 482 LLSSSMDKTVRLWDLSSKTCLKVF-SHSDYVTCIQFNPVDDNYFISGSLDAKVRIWSI 538
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/63 (34%), Positives = 38/63 (60%)
Frame = +1
Query: 565 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAV 744
S K + + GH + V +++ +L+ S S D++VR+WD+ + CLK +HSD V+ +
Sbjct: 457 SEKPVCSFVGHLDDVLDLSWSKSQHLL-SSSMDKTVRLWDLSSKTCLKVF-SHSDYVTCI 514
Query: 745 HFN 753
FN
Sbjct: 515 QFN 517
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
+ H ++ S+KFS +G +LAS+ D +I+IW
Sbjct: 359 IQAHKGSIWSIKFSLDGRYLASAGEDCVIQIW 390
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 64.5 bits (150), Expect = 7e-11
Identities = 23/79 (29%), Positives = 47/79 (59%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
I + S DKT+++W++ +G+C++ GH + V +P + SG D ++ +WD+ T
Sbjct: 514 IATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTA 573
Query: 697 KCLKPLPAHSDPVSAVHFN 753
+C+ PL H+ V ++ ++
Sbjct: 574 RCITPLMGHNSCVWSLSYS 592
Score = 57.6 bits (133), Expect = 8e-09
Identities = 26/79 (32%), Positives = 48/79 (60%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 702
S S D+T ++W + + L+ + GH + V +++P N I +GS D++VR+WDV+TG+C
Sbjct: 477 SCSHDRTARIWSMDRIQPLRIMAGHLSDV---DWHPNCNYIATGSSDKTVRLWDVQTGEC 533
Query: 703 LKPLPAHSDPVSAVHFNRD 759
++ H V ++ + D
Sbjct: 534 VRIFIGHRSMVLSLAMSPD 552
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 16/98 (16%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
R + S +D T+ +W+LS+ +C+ L GH++ V+ +++ + +L+ SGS D +V++WDV
Sbjct: 554 RYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVT 613
Query: 691 TG----------------KCLKPLPAHSDPVSAVHFNR 756
+ + L+ P S PV A+ F+R
Sbjct: 614 SSTKLTKAEEKNGNSNRLRSLRTFPTKSTPVHALRFSR 651
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
++S+S D T+++W L KGH+ V+ F+P + S S D + RIW +
Sbjct: 433 VLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRI 492
Query: 697 KCLKPLPAHSDPV 735
+ L+ + H V
Sbjct: 493 QPLRIMAGHLSDV 505
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/65 (36%), Positives = 33/65 (50%)
Frame = +2
Query: 308 RTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGIS 487
R +YTL L GH+ V S FSP G+++ SSSAD I++W GH +
Sbjct: 408 RRSYTL---LLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVW 464
Query: 488 DVAWS 502
D +S
Sbjct: 465 DAQFS 469
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +2
Query: 266 HYHNLLHSQTSLQWRTNYTLKFTL-AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD 442
++ + H +T+ W + + AGH +S V + PN ++A+ S+DK +++W
Sbjct: 474 YFASCSHDRTARIWSMDRIQPLRIMAGH---LSDVDWHPNCNYIATGSSDKTVRLWDVQT 530
Query: 443 GKFEKTISGHKMGISDVAWSSD 508
G+ + GH+ + +A S D
Sbjct: 531 GECVRIFIGHRSMVLSLAMSPD 552
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 586 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFN 753
L GHS V+ F+P + ++S S D ++R+W + L H+ PV F+
Sbjct: 414 LLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFS 469
Score = 37.1 bits (82), Expect = 0.013
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Frame = +2
Query: 230 HGGP--SASLSVQIHYHNLLHSQTSLQ-WRTNYTLKFTL-AGHTKAVSSVKFSPNGEWLA 397
H GP SA+ S + + T+++ W T GH V +FSP G + A
Sbjct: 417 HSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFA 476
Query: 398 SSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW 499
S S D+ +IW + + ++GH +SDV W
Sbjct: 477 SCSHDRTARIWSMDRIQPLRIMAGH---LSDVDW 507
Score = 35.1 bits (77), Expect = 0.051
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDAG*L 520
GH V S+ SP+G ++AS D I +W + + GH + +++S + L
Sbjct: 539 GHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLL 598
Query: 521 S 523
+
Sbjct: 599 A 599
Score = 34.7 bits (76), Expect = 0.068
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 293 TSLQWRTNYTLKFT-LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
T + W + T L GH V S+ +S G LAS SAD +K+W
Sbjct: 564 TIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLW 610
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 64.5 bits (150), Expect = 7e-11
Identities = 26/82 (31%), Positives = 44/82 (53%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
L+ + + T+K+W+L K ++TL GH + NF+P SGS D +++IWD+R
Sbjct: 166 LVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRK 225
Query: 694 GKCLKPLPAHSDPVSAVHFNRD 759
C+ H+ V+ + F D
Sbjct: 226 KGCIHTYKGHTRGVNVLRFTPD 247
Score = 62.9 bits (146), Expect = 2e-10
Identities = 27/77 (35%), Positives = 40/77 (51%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 702
S S D LK+W++ C+ T KGH+ V F P IVSG D V++WD+ GK
Sbjct: 211 SGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKL 270
Query: 703 LKPLPAHSDPVSAVHFN 753
L +H + ++ F+
Sbjct: 271 LHEFKSHEGKIQSLDFH 287
Score = 61.7 bits (143), Expect = 5e-10
Identities = 28/83 (33%), Positives = 46/83 (55%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
R IVS +D +KVW+L++GK L K H + +F+P L+ +GS D++V+ WD+
Sbjct: 249 RWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLE 308
Query: 691 TGKCLKPLPAHSDPVSAVHFNRD 759
T + + + V + FN D
Sbjct: 309 TFELIGSGGTETTGVRCLTFNPD 331
Score = 50.0 bits (114), Expect = 2e-06
Identities = 18/81 (22%), Positives = 43/81 (53%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
R++V+ +D + +W + + +L GHS+ + F+ L+ +G+ ++++WD+
Sbjct: 123 RVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLE 182
Query: 691 TGKCLKPLPAHSDPVSAVHFN 753
K ++ L H +V+F+
Sbjct: 183 EAKVVRTLTGHRSNCVSVNFH 203
Score = 46.4 bits (105), Expect = 2e-05
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 475
T GHT+ V+ ++F+P+G W+ S D ++K+W GK H+
Sbjct: 231 TYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHE 278
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
TL GH SV F P GE+ AS S D +KIW T GH G++ + ++ D
Sbjct: 189 TLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPD 247
Score = 37.9 bits (84), Expect = 0.007
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 475
+L GH+ + SV F + +A+ +A IK+W + K +T++GH+
Sbjct: 147 SLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHR 194
Score = 36.3 bits (80), Expect = 0.022
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
L+ + S DKT+K W+L + + + + + V C FNP ++ G ES++I+
Sbjct: 292 LLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCG-LQESLKIFSWEP 350
Query: 694 GKC 702
+C
Sbjct: 351 IRC 353
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 595 HSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFN 753
HS V C +S+ ++V+G D V +W + + L HS + +V F+
Sbjct: 108 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFD 161
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 344 HTKAVSSVKFSPNGEWLASSSADKLIKIW 430
H + S+ F P+ LA+ SADK +K W
Sbjct: 277 HEGKIQSLDFHPHEFLLATGSADKTVKFW 305
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 64.5 bits (150), Expect = 7e-11
Identities = 34/70 (48%), Positives = 42/70 (60%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
IVSAS DKT+KVW LS+ K TL GH+ YV +P +L SG D V +WD+ G
Sbjct: 167 IVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEG 226
Query: 697 KCLKPLPAHS 726
K L L A+S
Sbjct: 227 KKLYSLEANS 236
Score = 58.4 bits (135), Expect = 5e-09
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 6/89 (6%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTL----KGHSNYVFCCNFNPQS--NLIVSGSFDESV 672
R IVSAS D+T+K+W + G+C T+ +GH ++V C F+P + IVS S+D++V
Sbjct: 118 RQIVSASRDRTIKLWN-TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTV 176
Query: 673 RIWDVRTGKCLKPLPAHSDPVSAVHFNRD 759
++W++ K L H+ VS V + D
Sbjct: 177 KVWNLSNCKLRSTLAGHTGYVSTVAVSPD 205
Score = 52.0 bits (119), Expect = 4e-07
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSS-----GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 678
+IVSAS DK++ +W+L+ G + L GHS++V + +SGS+D +R+
Sbjct: 30 IIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL 89
Query: 679 WDVRTGKCLKPLPAHSDPVSAVHFNRD 759
WD+ G + H+ V +V F+ D
Sbjct: 90 WDLAAGVSTRRFVGHTKDVLSVAFSLD 116
Score = 48.0 bits (109), Expect = 7e-06
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Frame = +2
Query: 305 WRTNYTLKFTLA----GHTKAVSSVKFSPNG--EWLASSSADKLIKIWGAYDGKFEKTIS 466
W T K+T++ GH VS V+FSPN + S+S DK +K+W + K T++
Sbjct: 132 WNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLA 191
Query: 467 GHKMGISDVAWSSD 508
GH +S VA S D
Sbjct: 192 GHTGYVSTVAVSPD 205
Score = 44.4 bits (100), Expect = 8e-05
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Frame = +1
Query: 520 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 699
+S S D L++W+L++G + GH+ V F+ + IVS S D ++++W+ G+
Sbjct: 79 LSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNT-LGE 137
Query: 700 CLKPL----PAHSDPVSAVHFN 753
C + H D VS V F+
Sbjct: 138 CKYTISEGGEGHRDWVSCVRFS 159
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +2
Query: 311 TNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 448
+N L+ TLAGHT VS+V SP+G AS D ++ +W +GK
Sbjct: 182 SNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK 227
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS----GHKMGISDVAWS 502
GHTK V SV FS + + S+S D+ IK+W G+ + TIS GH+ +S V +S
Sbjct: 103 GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTL-GECKYTISEGGEGHRDWVSCVRFS 159
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
L GH+ V V S +G++ S S D +++W G + GH + VA+S D
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLD 116
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Frame = +2
Query: 323 LKFTLAGHTKAVSSVKFS-PNGEWLASSSADKLIKIWG------AYDGKFEKTISGHKMG 481
LK T+ HT V+++ N + + S+S DK I +W AY G ++ ++GH
Sbjct: 7 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAY-GVAQRRLTGHSHF 65
Query: 482 ISDVAWSSD 508
+ DV SSD
Sbjct: 66 VEDVVLSSD 74
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/79 (37%), Positives = 43/79 (54%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
L S D +VW+L +G+ + +GH VF NF+P + SG D RIWD+R
Sbjct: 395 LAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRM 454
Query: 694 GKCLKPLPAHSDPVSAVHF 750
K L +PAH++ VS V +
Sbjct: 455 RKSLYIIPAHANLVSQVKY 473
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/77 (33%), Positives = 42/77 (54%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 702
+ S DKT ++W++++G L +GHS V+ F L S D R+WD+RTG+
Sbjct: 356 TTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRS 415
Query: 703 LKPLPAHSDPVSAVHFN 753
+ H PV +V+F+
Sbjct: 416 ILVFQGHIKPVFSVNFS 432
Score = 54.4 bits (125), Expect = 8e-08
Identities = 26/81 (32%), Positives = 46/81 (56%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
+ +AS D+T K+W+ + G L+T +GH + + F+P + + S+D++ R+WD+ TG
Sbjct: 313 LATASADRTAKLWK-TDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTG 371
Query: 697 KCLKPLPAHSDPVSAVHFNRD 759
L HS V + F +D
Sbjct: 372 AELLLQEGHSRSVYGIAFQQD 392
Score = 48.0 bits (109), Expect = 7e-06
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = +2
Query: 290 QTSLQWRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG 469
+T+ W+T+ TL T GH ++ V F P+G++L ++S DK ++W G G
Sbjct: 320 RTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEG 379
Query: 470 HKMGISDVAWSSD 508
H + +A+ D
Sbjct: 380 HSRSVYGIAFQQD 392
Score = 47.6 bits (108), Expect = 9e-06
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRT 693
+ S +D ++W+L K L + H+N V + PQ + + S+D V IW R
Sbjct: 438 LASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRD 497
Query: 694 GKCLKPLPAHSDPVSAVHFNRD 759
+K L H V+++ D
Sbjct: 498 FSLVKSLAGHESKVASLDITAD 519
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Frame = +2
Query: 329 FTLAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS 505
+ + H VS VK+ P G +LA++S D + IW D K+++GH+ ++ + ++
Sbjct: 459 YIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITA 518
Query: 506 DAG*LSVLV---TIKL 544
D+ ++ + TIKL
Sbjct: 519 DSSCIATVSHDRTIKL 534
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/58 (39%), Positives = 26/58 (44%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDAG 514
GH K V SV FSPNG LAS D +IW K I H +S V + G
Sbjct: 421 GHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEG 478
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW 499
L H + + V FSP + LA++SAD+ K+W DG +T GH ++ VA+
Sbjct: 294 LKDHKERATDVVFSPVDDCLATASADRTAKLWKT-DGTLLQTFEGHLDRLARVAF 347
Score = 34.3 bits (75), Expect = 0.090
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +2
Query: 284 HSQTSLQWRTNYTLKFTLA-GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT 460
+ +T W N + L GH+++V + F +G AS D L ++W G+
Sbjct: 359 YDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILV 418
Query: 461 ISGHKMGISDVAWS 502
GH + V +S
Sbjct: 419 FQGHIKPVFSVNFS 432
Score = 34.3 bits (75), Expect = 0.090
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
+ +AS D + +W +K+L GH + V + S+ I + S D ++++W
Sbjct: 481 LATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLW 535
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/82 (21%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSS-GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
+++ + S K+WE+ + LK H F+P + + + S D + ++W
Sbjct: 268 KILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKT 327
Query: 688 RTGKCLKPLPAHSDPVSAVHFN 753
G L+ H D ++ V F+
Sbjct: 328 -DGTLLQTFEGHLDRLARVAFH 348
Score = 31.9 bits (69), Expect = 0.48
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +2
Query: 314 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
+++L +LAGH V+S+ + + +A+ S D+ IK+W
Sbjct: 497 DFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLW 535
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/83 (36%), Positives = 49/83 (59%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
R +VSA+ D+T+K+W+L G C T+ SN C + + SG D ++R+WD++
Sbjct: 329 RHVVSAAYDRTIKLWDLHKGYCTNTVLFTSNCNAIC-LSIDGLTVFSGHMDGNLRLWDIQ 387
Query: 691 TGKCLKPLPAHSDPVSAVHFNRD 759
TGK L + HS V++V +R+
Sbjct: 388 TGKLLSEVAGHSSAVTSVSLSRN 410
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/63 (31%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRT 693
+++A+ L VW++SSG+ TL GH++ V + + S +VS ++D ++++WD+
Sbjct: 288 VIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHK 347
Query: 694 GKC 702
G C
Sbjct: 348 GYC 350
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/80 (22%), Positives = 41/80 (51%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
+ + D+ +K+W+ +SG +K+L G + + +++ + ++ +WDV +G
Sbjct: 246 LFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSG 305
Query: 697 KCLKPLPAHSDPVSAVHFNR 756
+ L H+D V AV ++
Sbjct: 306 RVRHTLTGHTDKVCAVDVSK 325
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
+ S D L++W++ +GK L + GHS+ V + + N I++ D ++D RT
Sbjct: 372 VFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRT 430
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
+ + S D ++ VW LS G + LK ++ + CC+++ + S + V W
Sbjct: 460 VAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWSGIGKPLASADKNGYVCTW 514
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
+AGH+ AV+SV S NG + +S D + ++
Sbjct: 395 VAGHSSAVTSVSLSRNGNRILTSGRDNVHNVF 426
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 62.9 bits (146), Expect = 2e-10
Identities = 25/82 (30%), Positives = 44/82 (53%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
L+ + + T+K+W+L K ++TL GH + +F+P SGS D +++IWD+R
Sbjct: 73 LVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK 132
Query: 694 GKCLKPLPAHSDPVSAVHFNRD 759
C+ H+ V+ + F D
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPD 154
Score = 62.5 bits (145), Expect = 3e-10
Identities = 26/77 (33%), Positives = 40/77 (51%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 702
S S D LK+W++ C+ T KGH+ V F P +VSG D V++WD+ GK
Sbjct: 118 SGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKL 177
Query: 703 LKPLPAHSDPVSAVHFN 753
L +H + ++ F+
Sbjct: 178 LTEFKSHEGQIQSLDFH 194
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/83 (32%), Positives = 45/83 (54%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
R +VS +D +KVW+L++GK L K H + +F+P L+ +GS D +V+ WD+
Sbjct: 156 RWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLE 215
Query: 691 TGKCLKPLPAHSDPVSAVHFNRD 759
T + + + V + FN D
Sbjct: 216 TFELIGSGGPETAGVRCLSFNPD 238
Score = 48.0 bits (109), Expect = 7e-06
Identities = 18/81 (22%), Positives = 42/81 (51%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
R++V+ +D + +W + + +L GHS+ + F+ L+ +G+ ++++WD+
Sbjct: 30 RVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLE 89
Query: 691 TGKCLKPLPAHSDPVSAVHFN 753
K ++ L H +V F+
Sbjct: 90 EAKIVRTLTGHRSNCISVDFH 110
Score = 46.4 bits (105), Expect = 2e-05
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 475
T GHT+ V+ ++F+P+G W+ S D ++K+W GK H+
Sbjct: 138 TYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHE 185
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
TL GH SV F P GE+ AS S D +KIW T GH G++ + ++ D
Sbjct: 96 TLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPD 154
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 475
+L GH+ + SV F + +A+ +A IK+W + K +T++GH+
Sbjct: 54 SLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHR 101
Score = 35.1 bits (77), Expect = 0.051
Identities = 17/63 (26%), Positives = 34/63 (53%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
L+ + S D+T+K W+L + + + + + V C +FNP ++ G ES++I+
Sbjct: 199 LLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCG-LQESLKIFSWEP 257
Query: 694 GKC 702
+C
Sbjct: 258 IRC 260
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 577 LKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFN 753
L+ HS V C +S+ ++V+G D V +W + + L HS + +V F+
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFD 68
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 344 HTKAVSSVKFSPNGEWLASSSADKLIKIW 430
H + S+ F P+ LA+ SAD+ +K W
Sbjct: 184 HEGQIQSLDFHPHEFLLATGSADRTVKFW 212
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 62.9 bits (146), Expect = 2e-10
Identities = 25/82 (30%), Positives = 44/82 (53%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
L+ + + T+K+W+L K ++TL GH + +F+P SGS D +++IWD+R
Sbjct: 73 LVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK 132
Query: 694 GKCLKPLPAHSDPVSAVHFNRD 759
C+ H+ V+ + F D
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPD 154
Score = 62.5 bits (145), Expect = 3e-10
Identities = 26/77 (33%), Positives = 40/77 (51%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 702
S S D LK+W++ C+ T KGH+ V F P +VSG D V++WD+ GK
Sbjct: 118 SGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKL 177
Query: 703 LKPLPAHSDPVSAVHFN 753
L +H + ++ F+
Sbjct: 178 LTEFKSHEGQIQSLDFH 194
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/83 (32%), Positives = 45/83 (54%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
R +VS +D +KVW+L++GK L K H + +F+P L+ +GS D +V+ WD+
Sbjct: 156 RWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLE 215
Query: 691 TGKCLKPLPAHSDPVSAVHFNRD 759
T + + + V + FN D
Sbjct: 216 TFELIGSGGPETAGVRCLSFNPD 238
Score = 48.0 bits (109), Expect = 7e-06
Identities = 18/81 (22%), Positives = 42/81 (51%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
R++V+ +D + +W + + +L GHS+ + F+ L+ +G+ ++++WD+
Sbjct: 30 RVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLE 89
Query: 691 TGKCLKPLPAHSDPVSAVHFN 753
K ++ L H +V F+
Sbjct: 90 EAKIVRTLTGHRSNCISVDFH 110
Score = 46.4 bits (105), Expect = 2e-05
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 475
T GHT+ V+ ++F+P+G W+ S D ++K+W GK H+
Sbjct: 138 TYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHE 185
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/59 (37%), Positives = 29/59 (49%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
TL GH SV F P GE+ AS S D +KIW T GH G++ + ++ D
Sbjct: 96 TLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPD 154
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 475
+L GH+ + SV F + +A+ +A IK+W + K +T++GH+
Sbjct: 54 SLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHR 101
Score = 35.1 bits (77), Expect = 0.051
Identities = 17/63 (26%), Positives = 34/63 (53%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
L+ + S D+T+K W+L + + + + + V C +FNP ++ G ES++I+
Sbjct: 199 LLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCG-LQESLKIFSWEP 257
Query: 694 GKC 702
+C
Sbjct: 258 IRC 260
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 577 LKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFN 753
L+ HS V C +S+ ++V+G D V +W + + L HS + +V F+
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFD 68
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 344 HTKAVSSVKFSPNGEWLASSSADKLIKIW 430
H + S+ F P+ LA+ SAD+ +K W
Sbjct: 184 HEGQIQSLDFHPHEFLLATGSADRTVKFW 212
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 62.1 bits (144), Expect = 4e-10
Identities = 26/64 (40%), Positives = 38/64 (59%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
+ SAS D T+K+W+ GK L + GH V+ F+P I SGS D+S+ IW ++ G
Sbjct: 514 LASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEG 573
Query: 697 KCLK 708
K +K
Sbjct: 574 KIVK 577
Score = 58.4 bits (135), Expect = 5e-09
Identities = 27/56 (48%), Positives = 37/56 (66%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
GH + V S+ FSPNGE++AS S DK I IW +GK KT +G+ GI +V W+ +
Sbjct: 539 GHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGNG-GIFEVCWNKE 593
Score = 54.0 bits (124), Expect = 1e-07
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF--------NPQSNL-IVSGSFDE 666
L+ S SDD T K+W + + L+ H+ ++ + NP L + S SFD
Sbjct: 462 LLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDS 521
Query: 667 SVRIWDVRTGKCLKPLPAHSDPVSAVHFN 753
+V++WD GK L H +PV ++ F+
Sbjct: 522 TVKLWDAELGKMLCSFNGHREPVYSLAFS 550
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/57 (36%), Positives = 25/57 (43%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 502
T GH V+ VK+ P G LAS S D KIW F + H I + WS
Sbjct: 443 TFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWS 499
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/77 (22%), Positives = 39/77 (50%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 702
++S D + + ++ + KT GH V C ++P +L+ S S D + +IW+++
Sbjct: 423 TSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTF 482
Query: 703 LKPLPAHSDPVSAVHFN 753
+ L H+ + + ++
Sbjct: 483 VHDLREHTKEIYTIRWS 499
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/40 (37%), Positives = 27/40 (67%)
Frame = +1
Query: 577 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
++ L+GH++ V C ++P ++L+ SGS D + RIW + G
Sbjct: 258 VRILEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEG 297
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
I S S DK++ +W + GK +KT G+ C +N + N I + D SV + D R
Sbjct: 556 IASGSLDKSIHIWSIKEGKIVKTYTGNGGIFEVC-WNKEGNKIAACFADNSVCVLDFR 612
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKM 478
L GHT V + +SP+ LAS S D +IW +G F+ +G +
Sbjct: 261 LEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGRNI 308
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +2
Query: 305 WRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI 484
W N L TL+ H + S+K++ G++L + S D+ +W ++++ H
Sbjct: 351 WTLNGELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPT 410
Query: 485 SDVAWSSD 508
DV W ++
Sbjct: 411 LDVDWRNN 418
Score = 37.1 bits (82), Expect = 0.013
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Frame = +2
Query: 320 TLKFTLAGHTKAVSSVKFSPNGEW---------LASSSADKLIKIWGAYDGKFEKTISGH 472
T L HTK + ++++SP G LAS+S D +K+W A GK + +GH
Sbjct: 481 TFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGH 540
Query: 473 KMGISDVAWS 502
+ + +A+S
Sbjct: 541 REPVYSLAFS 550
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 61.7 bits (143), Expect = 5e-10
Identities = 26/74 (35%), Positives = 43/74 (58%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 702
SA DDK +K W+L K +++ GH + V+C +P +++++G D R+WD+RT
Sbjct: 229 SAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQ 288
Query: 703 LKPLPAHSDPVSAV 744
+ LP SD S +
Sbjct: 289 IFVLPHDSDVFSVL 302
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = +2
Query: 302 QWRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 472
+W + L GH V SV F P+ EW + SAD+ IKIW G + T++GH
Sbjct: 155 EWHAPWKNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGH 211
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
+++ S D T+K W+L GK + T+ H V +P+ N VS S D +++ + + G
Sbjct: 310 VITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASAD-NIKKFSLPKG 368
Query: 697 K-CLKPLPAHSDPVSAVHFNRD 759
+ C L D ++AV N D
Sbjct: 369 EFCHNMLSLQRDIINAVAVNED 390
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/77 (24%), Positives = 39/77 (50%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
++++ D +VW++ + + L H + VF P +++GS D +++ WD+R
Sbjct: 268 VVLTGGRDSVCRVWDIRTKMQIFVLP-HDSDVFSVLARPTDPQVITGSHDSTIKFWDLRY 326
Query: 694 GKCLKPLPAHSDPVSAV 744
GK + + H V A+
Sbjct: 327 GKSMATITNHKKTVRAM 343
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 702
+ S D+T+K+W++++G TL GH V + + + S D+ V+ WD+ K
Sbjct: 187 TGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKV 246
Query: 703 LKPLPAH 723
++ H
Sbjct: 247 IRSYHGH 253
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 571 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAH 723
K + L+GH +V F+P + +GS D +++IWDV TG L H
Sbjct: 161 KNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGH 211
Score = 35.5 bits (78), Expect = 0.039
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +2
Query: 323 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI 484
LK TL GH V + S ++ S+ DK +K W K ++ GH G+
Sbjct: 204 LKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGV 257
Score = 31.9 bits (69), Expect = 0.48
Identities = 18/64 (28%), Positives = 26/64 (40%)
Frame = +2
Query: 305 WRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI 484
W ++ + H V SV P + + S D IK W GK TI+ HK +
Sbjct: 281 WDIRTKMQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTV 340
Query: 485 SDVA 496
+A
Sbjct: 341 RAMA 344
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 61.7 bits (143), Expect = 5e-10
Identities = 24/62 (38%), Positives = 42/62 (67%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
L+ S + D T VW +G+ L T +GHS V+CC+ + S+ +++GS D++ ++WDV++
Sbjct: 51 LLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAKLWDVKS 110
Query: 694 GK 699
GK
Sbjct: 111 GK 112
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLK---GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
IVS +D +++W+ +GK LK GH + + ++GS D++ ++WD+
Sbjct: 190 IVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDM 249
Query: 688 RTGKCLKPLPAHSDPVSAV 744
RT +K PV+AV
Sbjct: 250 RTLTLIKTYTT-VVPVNAV 267
Score = 36.3 bits (80), Expect = 0.022
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 622 FNPQSNLIVSGSFDESVRIWDVRTGKCLK 708
+ P + IVSG D ++RIWD TGK LK
Sbjct: 183 WGPLNQTIVSGGEDAAIRIWDAETGKLLK 211
Score = 31.1 bits (67), Expect = 0.84
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
+ GH + ++ ++++ NG+ L S + D +W A +G+ T GH S W D
Sbjct: 33 MKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGH----SGAVWCCD 86
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +1
Query: 586 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRD 759
+KGH + +N +L+ S + D + +W G+ L HS V +RD
Sbjct: 33 MKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRD 90
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 448
T GH+ AV S + L + SAD+ K+W GK
Sbjct: 74 TYRGHSGAVWCCDISRDSSRLITGSADQTAKLWDVKSGK 112
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLK 591
+++ S D+T K+W++ SGK L T K
Sbjct: 94 LITGSADQTAKLWDVKSGKELFTFK 118
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 61.7 bits (143), Expect = 5e-10
Identities = 24/59 (40%), Positives = 41/59 (69%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
+++ SDD T KVW+ + C++TL+GH++ V +F+P+ +I++GS D +VRIW T
Sbjct: 202 LITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHATT 260
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF--NPQSNLIVSGSFDESVRIWDVRTG 696
SAS D+T+K+W L S TL H V C ++ +++GS D + ++WD +T
Sbjct: 160 SASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTK 219
Query: 697 KCLKPLPAHSDPVSAVHFN 753
C++ L H+ VSAV F+
Sbjct: 220 SCVQTLEGHTHNVSAVSFH 238
Score = 56.0 bits (129), Expect = 3e-08
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVR 690
++S+SDD +K+W+ G C + +GHS+YV FNP+ +N S S D +++IW++
Sbjct: 114 VLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG 173
Query: 691 TGKCLKPLPAHSDPVSAVHF 750
+ L AH V+ V +
Sbjct: 174 SPDPNFTLDAHLKGVNCVDY 193
Score = 36.3 bits (80), Expect = 0.022
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 466
TL GHT VS+V F P + + S D ++IW A + E T++
Sbjct: 224 TLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHATTYRLENTLN 268
Score = 35.1 bits (77), Expect = 0.051
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +2
Query: 329 FTLAGHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 502
FTL H K V+ V + G+ +L + S D K+W +T+ GH +S V++
Sbjct: 179 FTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFH 238
Query: 503 SDAG*LSVLVT 535
+ L +++T
Sbjct: 239 PE---LPIIIT 246
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 61.3 bits (142), Expect = 7e-10
Identities = 25/74 (33%), Positives = 43/74 (58%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 702
SA DDK +K W+L K +++ GH + V+C +P +++++G D R+WD+RT
Sbjct: 235 SAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQ 294
Query: 703 LKPLPAHSDPVSAV 744
+ L H + V +V
Sbjct: 295 IFALSGHDNTVCSV 308
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/77 (28%), Positives = 39/77 (50%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
++++ D +VW++ + + L GH N V P +V+GS D +++ WD+R
Sbjct: 274 VLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRY 333
Query: 694 GKCLKPLPAHSDPVSAV 744
GK + L H V A+
Sbjct: 334 GKTMSTLTHHKKSVRAM 350
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/68 (33%), Positives = 35/68 (51%)
Frame = +2
Query: 302 QWRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMG 481
+W + + GH V SV F P+ EW + SAD+ IKIW G + T++GH
Sbjct: 161 EWHAPWKNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQ 220
Query: 482 ISDVAWSS 505
+ +A S+
Sbjct: 221 VRGLAVSN 228
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/81 (28%), Positives = 36/81 (44%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
+V+ S D T+K W+L GK + TL H V +P+ N S S D + + +
Sbjct: 317 VVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNTKKFSLPKGE 376
Query: 697 KCLKPLPAHSDPVSAVHFNRD 759
C L ++A+ N D
Sbjct: 377 FCHNMLSQQKTIINAMAVNED 397
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 702
+ S D+T+K+W++++G TL GH V + + + S D+ V+ WD+ K
Sbjct: 193 TGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKV 252
Query: 703 LKPLPAH 723
++ H
Sbjct: 253 IRSYHGH 259
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +1
Query: 571 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPV 735
K + ++GH +V F+P + +GS D +++IWDV TG L H + V
Sbjct: 167 KNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQV 221
Score = 37.1 bits (82), Expect = 0.013
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 323 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI 484
LK TL GH + V + S ++ S+ DK +K W K ++ GH G+
Sbjct: 210 LKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGV 263
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +2
Query: 329 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI 484
F L+GH V SV P + + S D IK W GK T++ HK +
Sbjct: 296 FALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSV 347
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 60.9 bits (141), Expect = 9e-10
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDV 687
++S+S DKT+++W LSS CLK HS+YV C FNP +SGS D VR+W +
Sbjct: 527 LLSSSMDKTVRLWNLSSQTCLKVF-SHSDYVTCIQFNPVDDRYFISGSLDAKVRVWSI 583
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/63 (33%), Positives = 37/63 (58%)
Frame = +1
Query: 565 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAV 744
S K + +GH + V ++ +L+ S S D++VR+W++ + CLK +HSD V+ +
Sbjct: 502 SEKPFCSFQGHVDDVLDLAWSKSQHLL-SSSMDKTVRLWNLSSQTCLKVF-SHSDYVTCI 559
Query: 745 HFN 753
FN
Sbjct: 560 QFN 562
Score = 33.1 bits (72), Expect = 0.21
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
+ H ++ S+KFS +G++LAS+ D +I IW
Sbjct: 409 IQAHNGSIWSIKFSLDGKYLASAGEDCIIHIW 440
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 60.9 bits (141), Expect = 9e-10
Identities = 32/70 (45%), Positives = 40/70 (57%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
IVSAS DKT+KVW L + K TL GHS Y+ +P +L SG D + +WD+ G
Sbjct: 166 IVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEG 225
Query: 697 KCLKPLPAHS 726
K L L A S
Sbjct: 226 KKLYSLEAGS 235
Score = 58.8 bits (136), Expect = 4e-09
Identities = 32/88 (36%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLK---GHSNYVFCCNFNPQSNL--IVSGSFDESVR 675
R IVSAS D+T+K+W + G+C T+ GH +V C F+P + + IVS S+D++V+
Sbjct: 118 RQIVSASRDRTIKLWN-TLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 676 IWDVRTGKCLKPLPAHSDPVSAVHFNRD 759
+W+++ K L HS ++ V + D
Sbjct: 177 VWNLQNCKLRNTLAGHSGYLNTVAVSPD 204
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Frame = +1
Query: 514 LIVSASDDKTLKVWEL-----SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 678
+IV++S DK++ +W+L S G + + GHS++V + +SGS+D +R+
Sbjct: 30 VIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRL 89
Query: 679 WDVRTGKCLKPLPAHSDPVSAVHFNRD 759
WD+ TG+ + H+ V +V F+ D
Sbjct: 90 WDLATGESTRRFVGHTKDVLSVAFSTD 116
Score = 48.8 bits (111), Expect = 4e-06
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Frame = +2
Query: 305 WRTNYTLKFTLA---GHTKAVSSVKFSPNG--EWLASSSADKLIKIWGAYDGKFEKTISG 469
W T K+T++ GH + VS V+FSPN + S+S DK +K+W + K T++G
Sbjct: 132 WNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAG 191
Query: 470 HKMGISDVAWSSD 508
H ++ VA S D
Sbjct: 192 HSGYLNTVAVSPD 204
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +1
Query: 520 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 699
+S S D L++W+L++G+ + GH+ V F+ + IVS S D ++++W+ G+
Sbjct: 79 LSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNT-LGE 137
Query: 700 C---LKPLPAHSDPVSAVHFN 753
C + H + VS V F+
Sbjct: 138 CKYTISEADGHKEWVSCVRFS 158
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS---GHKMGISDVAWS 502
GHTK V SV FS + + S+S D+ IK+W G+ + TIS GHK +S V +S
Sbjct: 103 GHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTL-GECKYTISEADGHKEWVSCVRFS 158
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +2
Query: 314 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 448
N L+ TLAGH+ +++V SP+G AS D +I +W +GK
Sbjct: 182 NCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK 226
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
+ GH+ V V S +G++ S S D +++W G+ + GH + VA+S+D
Sbjct: 59 MTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTD 116
Score = 32.7 bits (71), Expect = 0.27
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Frame = +2
Query: 323 LKFTLAGHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYD-----GKFEKTISGHKMGI 484
LK T+ HT V+++ N + + +SS DK I +W G ++ ++GH +
Sbjct: 7 LKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFV 66
Query: 485 SDVAWSSD 508
DV SSD
Sbjct: 67 QDVVLSSD 74
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 60.5 bits (140), Expect = 1e-09
Identities = 25/60 (41%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDV 687
+L++S+S DKT+++W++ + CLK L H++YV C FNP + +SGS D +RIW++
Sbjct: 531 QLLLSSSMDKTVRLWDIETQSCLK-LFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNI 589
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/63 (41%), Positives = 41/63 (65%)
Frame = +1
Query: 565 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAV 744
S K + + GH + V +++ +S L++S S D++VR+WD+ T CLK L AH+D V+ V
Sbjct: 508 SDKPICSFTGHLDDVLDLSWS-RSQLLLSSSMDKTVRLWDIETQSCLK-LFAHNDYVTCV 565
Query: 745 HFN 753
FN
Sbjct: 566 QFN 568
Score = 31.1 bits (67), Expect = 0.84
Identities = 11/45 (24%), Positives = 26/45 (57%)
Frame = +1
Query: 556 ELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
+LS+ + ++ H ++ F+P S+L+ S D ++ +W+V+
Sbjct: 397 DLSALHMCQEIQAHQGGIWTMKFSPDSHLLASAGEDCAIHVWEVQ 441
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
+ H + ++KFSP+ LAS+ D I +W
Sbjct: 407 IQAHQGGIWTMKFSPDSHLLASAGEDCAIHVW 438
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 60.5 bits (140), Expect = 1e-09
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYV-FCCNFNPQSNLIVSGSFDESVRIWDVRT 693
IVSAS DKT++ W++ +GK +K + HS++V CC LI+SGS D + ++WD+R
Sbjct: 111 IVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQ 170
Query: 694 GKCLKPLPAHSDPVSAVHFN 753
++ P ++AV F+
Sbjct: 171 RGAIQTFP-DKYQITAVSFS 189
Score = 56.4 bits (130), Expect = 2e-08
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
LI S S D+ + +W + K LKGH N + ++ + IVS S D++VR WDV
Sbjct: 67 LIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVE 126
Query: 691 TGKCLKPLPAHSDPVSA 741
TGK +K + HS V++
Sbjct: 127 TGKQIKKMAEHSSFVNS 143
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/82 (28%), Positives = 43/82 (52%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
LI+S SDD T K+W++ ++T + +F+ ++ I +G D V++WD+R
Sbjct: 153 LIISGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDAADKIFTGGVDNDVKVWDLRK 211
Query: 694 GKCLKPLPAHSDPVSAVHFNRD 759
G+ L H D ++ + + D
Sbjct: 212 GEATMTLEGHQDTITGMSLSPD 233
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKMGISDVAWSSD 508
L+GH AV ++KF+P G +AS S D+ I +W + D K + GHK I D+ W+SD
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSD 107
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR-- 690
I + D +KVW+L G+ TL+GH + + + +P + +++ D + +WD+R
Sbjct: 195 IFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPY 254
Query: 691 --TGKCLKPLPAH 723
+C+K H
Sbjct: 255 APQNRCVKIFEGH 267
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELS----SGKCLKTLKGHS-NY---VFCCNFNPQSNLIVSGSFDES 669
L+ + D+K L VW++ +C+K +GH N+ + C+++P + +GS D
Sbjct: 237 LLTNGMDNK-LCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRM 295
Query: 670 VRIWDVRTGKCLKPLPAHSDPVSAVHFN 753
V IWD + + + LP H+ V+ F+
Sbjct: 296 VHIWDTTSRRTIYKLPGHTGSVNECVFH 323
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +1
Query: 586 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC--LKPLPAHSDPVSAVHFNRD 759
L GH + V+ FNP LI SGS D + +W V G C L H + + +H+ D
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVH-GDCKNFMVLKGHKNAILDLHWTSD 107
Score = 38.3 bits (85), Expect = 0.006
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Frame = +2
Query: 188 PLGPVPGHPAAHQTHG-GPSASLSVQIHYHNLLHSQTSLQWRTNYTLK--FTLAGHTKAV 358
P+ + GHP+A T P+ +L H + WR + K L GH A+
Sbjct: 45 PIMLLSGHPSAVYTMKFNPAGTLIASGS-----HDREIFLWRVHGDCKNFMVLKGHKNAI 99
Query: 359 SSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 472
+ ++ +G + S+S DK ++ W GK K ++ H
Sbjct: 100 LDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEH 137
Score = 37.5 bits (83), Expect = 0.010
Identities = 15/57 (26%), Positives = 33/57 (57%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
+ + S D+ + +W+ +S + + L GH+ V C F+P +I S S D+++ + ++
Sbjct: 287 VTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYLGEI 343
Score = 31.5 bits (68), Expect = 0.63
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = +2
Query: 356 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
+++V FS + + + D +K+W G+ T+ GH+ I+ ++ S D
Sbjct: 183 ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPD 233
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG----AYDGKFEKTISGH----KMGIS 487
TL GH ++ + SP+G +L ++ D + +W A + K GH + +
Sbjct: 217 TLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLL 276
Query: 488 DVAWSSD 508
+WS D
Sbjct: 277 KCSWSPD 283
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 60.5 bits (140), Expect = 1e-09
Identities = 24/63 (38%), Positives = 38/63 (60%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
+ + +AS DKT+K+W L K K L GH +V+ C+F+ +V+ S D + R+W +R
Sbjct: 230 KYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMR 289
Query: 691 TGK 699
GK
Sbjct: 290 AGK 292
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = +2
Query: 302 QWRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMG 481
Q T + L H + SP ++LA++S+DK +KIW K EK ++GH+
Sbjct: 202 QTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGHERW 261
Query: 482 ISDVAWSSD 508
+ D +S D
Sbjct: 262 VWDCDFSMD 270
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/63 (26%), Positives = 35/63 (55%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
++ S S+D ++K+W+L +C + + S V +P ++SG + ++R+WD+R
Sbjct: 98 MMYSGSEDGSVKIWDLRVRECQREFRSVSP-VNTVVLHPNQTELISGDQNGNIRVWDLRA 156
Query: 694 GKC 702
C
Sbjct: 157 DLC 159
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2
Query: 317 YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 475
+ L+ L GH + V FS +GE+L ++S+D ++W GK E H+
Sbjct: 249 FKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHR 301
Score = 36.3 bits (80), Expect = 0.022
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +1
Query: 577 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAV 744
++ H+ V F +++ SGS D SV+IWD+R +C + + S PV+ V
Sbjct: 77 VRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFRSVS-PVNTV 131
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/81 (23%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
+ +AS D+T+++W+ +G+C + + +V P+ +V+ + + +R++D+R+
Sbjct: 13 LATASHDQTIRLWQARTGRCYFSFRYPDLHVNRLELTPEKGKLVA-ACNPHIRLFDLRSY 71
Query: 697 KCLKPL---PAHSDPVSAVHF 750
P+ +H+ V AV F
Sbjct: 72 NPHIPVRNFVSHTKNVMAVGF 92
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +1
Query: 490 CGMVL*RRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCC 618
C + +V+AS D T ++W + +GK + H CC
Sbjct: 265 CDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHRKATVCC 307
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 344 HTKAVSSVKFSPNGEWLASSSADKLIKIW 430
HTK V +V F G + S S D +KIW
Sbjct: 83 HTKNVMAVGFQYTGHMMYSGSEDGSVKIW 111
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 60.1 bits (139), Expect = 2e-09
Identities = 24/59 (40%), Positives = 40/59 (67%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
+++ SDD T KVW+ + C++TL+GH++ V F+P+ +I++GS D +VRIW T
Sbjct: 202 LITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT 260
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVR 690
++S+SDD +K+W+ G C + +GHS+YV FNP+ +N S S D +++IW++
Sbjct: 114 VLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLG 173
Query: 691 TGKCLKPLPAHSDPVSAVHF 750
+ L AH V+ V +
Sbjct: 174 SPDPNFTLDAHQKGVNCVDY 193
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF--NPQSNLIVSGSFDESVRIWDVRTG 696
SAS D+T+K+W L S TL H V C ++ +++GS D + ++WD +T
Sbjct: 160 SASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTK 219
Query: 697 KCLKPLPAHSDPVSAVHFN 753
C++ L H+ VSAV F+
Sbjct: 220 SCVQTLEGHTHNVSAVCFH 238
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 508 RRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
++ +V+ +DD ++V+ ++ +K + HS+Y+ C +P ++S S D +++WD
Sbjct: 69 KQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
Query: 688 RTG-KCLKPLPAHSDPVSAVHFN 753
G C + HS V V FN
Sbjct: 129 EKGWACTQIFEGHSHYVMQVTFN 151
Score = 35.1 bits (77), Expect = 0.051
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 466
TL GHT VS+V F P + + S D ++IW A + E T++
Sbjct: 224 TLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLN 268
Score = 34.7 bits (76), Expect = 0.068
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +2
Query: 329 FTLAGHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 502
FTL H K V+ V + G+ +L + S D K+W +T+ GH +S V +
Sbjct: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFH 238
Query: 503 SDAG*LSVLVT 535
+ L +++T
Sbjct: 239 PE---LPIIIT 246
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDV 687
++S+S D+T+++W + +CL+T H+N+V C FNP N +SGS D VRIWDV
Sbjct: 336 LLSSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNYFISGSIDGKVRIWDV 392
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +1
Query: 565 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAV 744
S K L KGH + +++ + L+ S S DE+VR+W V +CL+ H++ V+ V
Sbjct: 311 SEKPLHEFKGHIGEILDLSWSEKGYLL-SSSVDETVRLWRVGCDECLRTF-THNNFVTCV 368
Query: 745 HFN 753
FN
Sbjct: 369 AFN 371
Score = 35.1 bits (77), Expect = 0.051
Identities = 16/62 (25%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Frame = +2
Query: 254 SVQIHYHNLLHSQT-SLQWR--TNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIK 424
SV+ H + QT Q++ ++ + + H ++ ++KFSP+G+++AS+ D +++
Sbjct: 184 SVRTQLHQVARVQTHKKQFKELSSMCIDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVR 243
Query: 425 IW 430
+W
Sbjct: 244 VW 245
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDV 687
++S+S D+T+++W + +CL+T H+N+V C FNP N +SGS D VRIWDV
Sbjct: 336 LLSSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNYFISGSIDGKVRIWDV 392
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +1
Query: 565 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAV 744
S K L KGH + +++ + L+ S S DE+VR+W V +CL+ H++ V+ V
Sbjct: 311 SEKPLHEFKGHIGEILDLSWSEKGYLL-SSSVDETVRLWRVGCDECLRTF-THNNFVTCV 368
Query: 745 HFN 753
FN
Sbjct: 369 AFN 371
Score = 35.1 bits (77), Expect = 0.051
Identities = 16/62 (25%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Frame = +2
Query: 254 SVQIHYHNLLHSQT-SLQWR--TNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIK 424
SV+ H + QT Q++ ++ + + H ++ ++KFSP+G+++AS+ D +++
Sbjct: 184 SVRTQLHQVARVQTHKKQFKELSSMCIDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVR 243
Query: 425 IW 430
+W
Sbjct: 244 VW 245
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 59.3 bits (137), Expect = 3e-09
Identities = 24/59 (40%), Positives = 39/59 (66%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
+++ SDD T KVW+ + C++TL GH++ V F+P+ +I++GS D +VRIW T
Sbjct: 202 LITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT 260
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVR 690
++S+SDD +K+W+ +G C + +GHS+YV FNP+ +N S S D +++IW++
Sbjct: 114 VLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLG 173
Query: 691 TGKCLKPLPAHSDPVSAVHF 750
+ L AH V+ V +
Sbjct: 174 SPDPNFTLDAHQKGVNCVDY 193
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF--NPQSNLIVSGSFDESVRIWDVRTG 696
SAS D+T+K+W L S TL H V C ++ +++GS D + ++WD +T
Sbjct: 160 SASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTK 219
Query: 697 KCLKPLPAHSDPVSAVHFN 753
C++ L H+ VSAV F+
Sbjct: 220 SCVQTLDGHTHNVSAVCFH 238
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 508 RRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
++ +V+ +DD ++V+ ++ +K + HS+Y+ C +P ++S S D +++WD
Sbjct: 69 KQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
Query: 688 RTG-KCLKPLPAHSDPVSAVHFN 753
G C + HS V V FN
Sbjct: 129 ENGWACTQIFEGHSHYVMQVVFN 151
Score = 34.7 bits (76), Expect = 0.068
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +2
Query: 329 FTLAGHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 502
FTL H K V+ V + G+ +L + S D K+W +T+ GH +S V +
Sbjct: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFH 238
Query: 503 SDAG*LSVLVT 535
+ L +++T
Sbjct: 239 PE---LPIIIT 246
Score = 34.7 bits (76), Expect = 0.068
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 466
TL GHT VS+V F P + + S D ++IW A + E T++
Sbjct: 224 TLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLN 268
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 59.3 bits (137), Expect = 3e-09
Identities = 24/59 (40%), Positives = 39/59 (66%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
+++ SDD T KVW+ + C++TL GH++ V F+P+ +I++GS D +VRIW T
Sbjct: 202 LITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT 260
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVR 690
++S+SDD +K+W+ +G C + +GHS+YV FNP+ +N S S D +++IW++
Sbjct: 114 VLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLG 173
Query: 691 TGKCLKPLPAHSDPVSAVHF 750
+ L AH V+ V +
Sbjct: 174 SPDPNFTLDAHQKGVNCVDY 193
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF--NPQSNLIVSGSFDESVRIWDVRTG 696
SAS D+T+K+W L S TL H V C ++ +++GS D + ++WD +T
Sbjct: 160 SASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTK 219
Query: 697 KCLKPLPAHSDPVSAVHFN 753
C++ L H+ VSAV F+
Sbjct: 220 SCVQTLDGHTHNVSAVCFH 238
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 508 RRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
++ +V+ +DD ++V+ ++ +K + HS+Y+ C +P ++S S D +++WD
Sbjct: 69 KQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
Query: 688 RTG-KCLKPLPAHSDPVSAVHFN 753
G C + HS V V FN
Sbjct: 129 ENGWACTQIFEGHSHYVMQVVFN 151
Score = 34.7 bits (76), Expect = 0.068
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +2
Query: 329 FTLAGHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 502
FTL H K V+ V + G+ +L + S D K+W +T+ GH +S V +
Sbjct: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFH 238
Query: 503 SDAG*LSVLVT 535
+ L +++T
Sbjct: 239 PE---LPIIIT 246
Score = 34.7 bits (76), Expect = 0.068
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 466
TL GHT VS+V F P + + S D ++IW A + E T++
Sbjct: 224 TLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLN 268
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 59.3 bits (137), Expect = 3e-09
Identities = 24/59 (40%), Positives = 39/59 (66%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
+++ SDD T KVW+ + C++TL GH++ V F+P+ +I++GS D +VRIW T
Sbjct: 202 LITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATT 260
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVR 690
++S+SDD +K+W+ +G C + +GHS+YV FNP+ +N S S D +++IW++
Sbjct: 114 VLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLG 173
Query: 691 TGKCLKPLPAHSDPVSAVHF 750
+ L AH V+ V +
Sbjct: 174 SPDPNFTLDAHQKGVNCVDY 193
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF--NPQSNLIVSGSFDESVRIWDVRTG 696
SAS D+T+K+W L S TL H V C ++ +++GS D + ++WD +T
Sbjct: 160 SASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTK 219
Query: 697 KCLKPLPAHSDPVSAVHFN 753
C++ L H+ VSAV F+
Sbjct: 220 SCVQTLDGHTHNVSAVCFH 238
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 508 RRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
++ +V+ +DD ++V+ ++ +K + HS+Y+ C +P ++S S D +++WD
Sbjct: 69 KQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDW 128
Query: 688 RTG-KCLKPLPAHSDPVSAVHFN 753
G C + HS V V FN
Sbjct: 129 ENGWACTQIFEGHSHYVMQVVFN 151
Score = 34.7 bits (76), Expect = 0.068
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +2
Query: 329 FTLAGHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 502
FTL H K V+ V + G+ +L + S D K+W +T+ GH +S V +
Sbjct: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFH 238
Query: 503 SDAG*LSVLVT 535
+ L +++T
Sbjct: 239 PE---LPIIIT 246
Score = 34.7 bits (76), Expect = 0.068
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 466
TL GHT VS+V F P + + S D ++IW A + E T++
Sbjct: 224 TLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLN 268
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 59.3 bits (137), Expect = 3e-09
Identities = 25/61 (40%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDV 687
+L++S+S DKT+++W++ + CLK L H++YV C F+P N +SGS D +RIW +
Sbjct: 518 QLLLSSSMDKTVRLWDIETKTCLK-LFAHNDYVTCIQFSPVDENYFLSGSLDAKIRIWSI 576
Query: 688 R 690
+
Sbjct: 577 Q 577
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/63 (39%), Positives = 43/63 (68%)
Frame = +1
Query: 565 SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAV 744
S K + +LKGH + + +++ +S L++S S D++VR+WD+ T CLK L AH+D V+ +
Sbjct: 495 SDKPVCSLKGHLDAILDLSWS-KSQLLLSSSMDKTVRLWDIETKTCLK-LFAHNDYVTCI 552
Query: 745 HFN 753
F+
Sbjct: 553 QFS 555
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
+ H AV ++KFS + +LAS AD++I +W
Sbjct: 400 IQAHEGAVWTIKFSQDAHYLASGGADRVIHVW 431
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/45 (24%), Positives = 24/45 (53%)
Frame = +1
Query: 556 ELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
ELS+ + ++ H V+ F+ ++ + SG D + +W+V+
Sbjct: 390 ELSALHMCQEIQAHEGAVWTIKFSQDAHYLASGGADRVIHVWEVQ 434
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 59.3 bits (137), Expect = 3e-09
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
+ +A+ D W++ SGK T KGHS+Y+ ++ I++GS D + RIWD +TG
Sbjct: 174 VFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTG 233
Query: 697 KCLK 708
KC+K
Sbjct: 234 KCVK 237
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTL----KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 684
I++ S+D T ++W+ +GKC+K + K V + + +V G +++ +W+
Sbjct: 216 ILTGSEDGTARIWDCKTGKCVKVIGSQDKKSRLRVSSMALDGSESWLVCGQ-GKNLALWN 274
Query: 685 VRTGKCLK--PLPAHSDPV 735
+ +C++ P+PAH V
Sbjct: 275 LPASECVQTIPIPAHVQDV 293
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +1
Query: 625 NPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAV 744
+PQS + + + D WDV +GK HSD + V
Sbjct: 168 DPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTV 207
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 58.8 bits (136), Expect = 4e-09
Identities = 31/70 (44%), Positives = 40/70 (57%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
IVSAS DKT+KVW L + K +L GHS Y+ +P +L SG D + +WD+ G
Sbjct: 166 IVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEG 225
Query: 697 KCLKPLPAHS 726
K L L A S
Sbjct: 226 KKLYSLEAGS 235
Score = 58.4 bits (135), Expect = 5e-09
Identities = 32/88 (36%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLK---GHSNYVFCCNFNPQSNL--IVSGSFDESVR 675
R IVSAS D+T+K+W + G+C T+ GH +V C F+P + + IVS S+D++V+
Sbjct: 118 RQIVSASRDRTIKLWN-TLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 676 IWDVRTGKCLKPLPAHSDPVSAVHFNRD 759
+W+++ K L HS ++ V + D
Sbjct: 177 VWNLQNCKLRNSLVGHSGYLNTVAVSPD 204
Score = 54.8 bits (126), Expect = 6e-08
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Frame = +1
Query: 514 LIVSASDDKTLKVWEL-----SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 678
+IV+AS DK++ +W+L S G + L GHS++V + +SGS+D +R+
Sbjct: 30 IIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL 89
Query: 679 WDVRTGKCLKPLPAHSDPVSAVHFNRD 759
WD+ TG+ + H+ V +V F+ D
Sbjct: 90 WDLATGETTRRFVGHTKDVLSVAFSTD 116
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +1
Query: 520 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 699
+S S D L++W+L++G+ + GH+ V F+ + IVS S D ++++W+ G+
Sbjct: 79 LSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNT-LGE 137
Query: 700 C---LKPLPAHSDPVSAVHFN 753
C + H + VS V F+
Sbjct: 138 CKYTISEGDGHKEWVSCVRFS 158
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Frame = +2
Query: 305 WRTNYTLKFTLA---GHTKAVSSVKFSPNG--EWLASSSADKLIKIWGAYDGKFEKTISG 469
W T K+T++ GH + VS V+FSPN + S+S DK +K+W + K ++ G
Sbjct: 132 WNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVG 191
Query: 470 HKMGISDVAWSSD 508
H ++ VA S D
Sbjct: 192 HSGYLNTVAVSPD 204
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS---GHKMGISDVAWS 502
GHTK V SV FS + + S+S D+ IK+W G+ + TIS GHK +S V +S
Sbjct: 103 GHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTL-GECKYTISEGDGHKEWVSCVRFS 158
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
L GH+ V V S +G++ S S D +++W G+ + GH + VA+S+D
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTD 116
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 314 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 448
N L+ +L GH+ +++V SP+G AS D +I +W +GK
Sbjct: 182 NCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK 226
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +2
Query: 323 LKFTLAGHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYD-----GKFEKTISGHKMGI 484
LK + HT V+++ N + + ++S DK I +W G ++ ++GH +
Sbjct: 7 LKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFV 66
Query: 485 SDVAWSSD 508
DV SSD
Sbjct: 67 EDVVLSSD 74
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 58.8 bits (136), Expect = 4e-09
Identities = 22/62 (35%), Positives = 42/62 (67%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
L+ S + D T +W +G+ L T +GH+ V+CC+ + S+ +++GS D++ ++WDV++
Sbjct: 24 LLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKS 83
Query: 694 GK 699
GK
Sbjct: 84 GK 85
Score = 44.4 bits (100), Expect = 8e-05
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLK---GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
IVS +DK +++W+ +GK LK GH + + ++GS D++ ++WD+
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDM 222
Query: 688 RTGKCLKPLPAHSDPVSAV 744
RT LK PV+AV
Sbjct: 223 RTLTLLKTYTT-VVPVNAV 240
Score = 35.9 bits (79), Expect = 0.029
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 622 FNPQSNLIVSGSFDESVRIWDVRTGKCLK 708
+ P + IVSG D+ +RIWD TGK LK
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAETGKLLK 184
Score = 32.7 bits (71), Expect = 0.27
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +2
Query: 350 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS---GHKMGISDVAWSSD 508
K ++ + P + + S DK+I+IW A GK K GHK I+ + ++D
Sbjct: 149 KRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAAD 204
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLK 591
+++ S D+T K+W++ SGK L T K
Sbjct: 67 LITGSADQTAKLWDVKSGKELFTFK 91
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = +1
Query: 586 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRD 759
+KGH + +N + +L+ S + D + +W G+ L H+ V +RD
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRD 63
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 472
+ GH + ++ ++++ G+ L S + D +W A +G+ T GH
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGH 51
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 448
T GH AV S + L + SAD+ K+W GK
Sbjct: 47 TYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGK 85
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 58.8 bits (136), Expect = 4e-09
Identities = 22/62 (35%), Positives = 42/62 (67%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
L+ S + D T +W +G+ L T +GH+ V+CC+ + S+ +++GS D++ ++WDV++
Sbjct: 24 LLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKS 83
Query: 694 GK 699
GK
Sbjct: 84 GK 85
Score = 44.4 bits (100), Expect = 8e-05
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLK---GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
IVS +DK +++W+ +GK LK GH + + ++GS D++ ++WD+
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDM 222
Query: 688 RTGKCLKPLPAHSDPVSAV 744
RT LK PV+AV
Sbjct: 223 RTLTLLKTYTT-VVPVNAV 240
Score = 35.9 bits (79), Expect = 0.029
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 622 FNPQSNLIVSGSFDESVRIWDVRTGKCLK 708
+ P + IVSG D+ +RIWD TGK LK
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAETGKLLK 184
Score = 32.7 bits (71), Expect = 0.27
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +2
Query: 350 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS---GHKMGISDVAWSSD 508
K ++ + P + + S DK+I+IW A GK K GHK I+ + ++D
Sbjct: 149 KRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAAD 204
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLK 591
+++ S D+T K+W++ SGK L T K
Sbjct: 67 LITGSADQTAKLWDVKSGKELFTFK 91
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = +1
Query: 586 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRD 759
+KGH + +N + +L+ S + D + +W G+ L H+ V +RD
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRD 63
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 472
+ GH + ++ ++++ G+ L S + D +W A +G+ T GH
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGH 51
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 448
T GH AV S + L + SAD+ K+W GK
Sbjct: 47 TYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGK 85
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 58.8 bits (136), Expect = 4e-09
Identities = 22/62 (35%), Positives = 42/62 (67%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
L+ S + D T +W +G+ L T +GH+ V+CC+ + S+ +++GS D++ ++WDV++
Sbjct: 24 LLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKS 83
Query: 694 GK 699
GK
Sbjct: 84 GK 85
Score = 44.4 bits (100), Expect = 8e-05
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLK---GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
IVS +DK +++W+ +GK LK GH + + ++GS D++ ++WD+
Sbjct: 163 IVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDM 222
Query: 688 RTGKCLKPLPAHSDPVSAV 744
RT LK PV+AV
Sbjct: 223 RTLTLLKTYTT-VVPVNAV 240
Score = 35.9 bits (79), Expect = 0.029
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +1
Query: 622 FNPQSNLIVSGSFDESVRIWDVRTGKCLK 708
+ P + IVSG D+ +RIWD TGK LK
Sbjct: 156 WGPLNQTIVSGGEDKVIRIWDAETGKLLK 184
Score = 32.7 bits (71), Expect = 0.27
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +2
Query: 350 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS---GHKMGISDVAWSSD 508
K ++ + P + + S DK+I+IW A GK K GHK I+ + ++D
Sbjct: 149 KRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAAD 204
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLK 591
+++ S D+T K+W++ SGK L T K
Sbjct: 67 LITGSADQTAKLWDVKSGKELFTFK 91
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = +1
Query: 586 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRD 759
+KGH + +N + +L+ S + D + +W G+ L H+ V +RD
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRD 63
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 472
+ GH + ++ ++++ G+ L S + D +W A +G+ T GH
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGH 51
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 448
T GH AV S + L + SAD+ K+W GK
Sbjct: 47 TYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGK 85
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 58.8 bits (136), Expect = 4e-09
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNY---VFCCNFNPQSNLIVSGSFDESVRIW 681
+LI + SDD +L VW + + + +KGH + + C + N S+L +SGS D SV I
Sbjct: 210 KLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIV 269
Query: 682 DVRTGKCLKPLPAHSDPVSAVHFN 753
++ TGK + L +H+D V V F+
Sbjct: 270 NIVTGKVVSSLNSHTDSVECVKFS 293
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
++++ S+D +L +W L GH+ V C +F P LI +GS D S+ +W+ +T
Sbjct: 169 IVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKT 228
Query: 694 GKCL---KPLPAHSDPVSAVHFN 753
+ + K P H++ ++ + N
Sbjct: 229 CESIHIVKGHPYHTEGLTCLDIN 251
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
L+ + D +W++ +G L GH + V C F+ L+ SG D V+I+D +
Sbjct: 85 LVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASS 144
Query: 694 G--KCL 705
G KC+
Sbjct: 145 GTLKCV 150
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS---NLIVSGSFDESVRIWD 684
L +S S D ++ + + +GK + +L H++ V C F+P S L +G D+ + IWD
Sbjct: 256 LAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWD 315
Query: 685 VR 690
++
Sbjct: 316 LQ 317
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW 499
L GH +VS + FS +G+ LAS D +++I+ A G + + G GI V W
Sbjct: 109 LPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRW 163
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 583 TLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRD 759
T GH ++ +P + L+ +G D+ +W + G LP H D VS + F+ D
Sbjct: 65 TFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYD 124
Score = 35.9 bits (79), Expect = 0.029
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 541 TLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 684
T+ +W+ G C+ T GH + V + + ++ IVS S D + R+++
Sbjct: 351 TVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFE 398
Score = 34.7 bits (76), Expect = 0.068
Identities = 20/77 (25%), Positives = 32/77 (41%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
L + DK L +W+L + + H V + S + +G + +V IWD
Sbjct: 301 LAATGGMDKKLIIWDLQHSTP-RFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLL 359
Query: 694 GKCLKPLPAHSDPVSAV 744
G C+ H D V A+
Sbjct: 360 GNCVHTYHGHQDAVQAI 376
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/83 (22%), Positives = 40/83 (48%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
+L+ S D +++++ SSG L G + ++P+ +++++GS D S+ +W+
Sbjct: 126 QLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNAD 185
Query: 691 TGKCLKPLPAHSDPVSAVHFNRD 759
L H+ V+ F D
Sbjct: 186 KEAYLNMFSGHNLNVTCGDFTPD 208
Score = 32.3 bits (70), Expect = 0.36
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWL---ASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW 499
+L HT +V VKFSP+ + A+ DK + IW + I H+ G++ + W
Sbjct: 279 SLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHST-PRFICEHEEGVTSLTW 336
Score = 31.5 bits (68), Expect = 0.63
Identities = 14/68 (20%), Positives = 33/68 (48%)
Frame = +2
Query: 305 WRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI 484
W ++ + H + V+S+ + ++LA+ A+ + IW + G T GH+ +
Sbjct: 314 WDLQHSTPRFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAV 373
Query: 485 SDVAWSSD 508
++ S++
Sbjct: 374 QAISVSTN 381
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +2
Query: 320 TLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGIS 487
TLK L G + V++ P G + + S D + +W A + SGH + ++
Sbjct: 146 TLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVT 201
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 58.4 bits (135), Expect = 5e-09
Identities = 25/79 (31%), Positives = 48/79 (60%)
Frame = +1
Query: 508 RRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
+ L+VS D+ +K+W+ SG+ L +L GH N V +N N +++ S D+ ++++D+
Sbjct: 280 KSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDI 339
Query: 688 RTGKCLKPLPAHSDPVSAV 744
RT K L+ H+ V+++
Sbjct: 340 RTMKELQSFRGHTKDVTSL 358
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/56 (35%), Positives = 34/56 (60%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW 499
+L GH V SVK++ NG WL ++S D++IK++ K ++ GH ++ +AW
Sbjct: 305 SLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAW 360
Score = 43.6 bits (98), Expect = 1e-04
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 19/98 (19%)
Frame = +1
Query: 523 SASDDKTLKVWELSS-----------GKCLKTLK--------GHSNYVFCCNFNPQSNLI 645
S SDD T+KVW+ + GK + ++ GH V +++P +L+
Sbjct: 224 SCSDDTTVKVWDFTKCVDESSLTGYIGKGVIEIRFGVMPCNAGHGWDVKSVDWHPTKSLL 283
Query: 646 VSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRD 759
VSG D+ V++WD R+G+ L L H + V +V +N++
Sbjct: 284 VSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQN 321
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +2
Query: 338 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
AGH V SV + P L S D+L+K+W G+ ++ GHK + V W+ +
Sbjct: 265 AGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQN 321
Score = 32.7 bits (71), Expect = 0.27
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +2
Query: 311 TNYTLKFTLAGHTK---AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMG 481
T++ KF A K +++ V ++P+G L + S +W FE + H
Sbjct: 108 TSFAAKFVHASLNKNRCSINRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQP 167
Query: 482 ISDVAWS 502
I + WS
Sbjct: 168 IRSMVWS 174
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/56 (26%), Positives = 23/56 (41%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 684
+VS D TLK W+ + H + +F S S D +V++WD
Sbjct: 180 MVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDLSFCKTDLKFCSCSDDTTVKVWD 235
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 57.6 bits (133), Expect = 8e-09
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDV 687
R + S D T+K+ + +G CLK L GH + F+P S ++ SGS D VR+W+
Sbjct: 119 RTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLDLEVRLWNT 178
Query: 688 RTGKCLKPLPAHSDPVSAVHFNRD 759
T +C++ + P++++ F+ +
Sbjct: 179 TTSECIRSHLFYR-PIASIAFHAE 201
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 475
L ++ + FS +G LAS+ D +KI G K ++GH+
Sbjct: 102 LGAPPRSTIAAAFSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGHR 148
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 57.6 bits (133), Expect = 8e-09
Identities = 29/75 (38%), Positives = 43/75 (57%)
Frame = +1
Query: 535 DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPL 714
D T+KV+ + S K +L GH V C + + LIV+GS D++++IW + G C K +
Sbjct: 561 DSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSI 620
Query: 715 PAHSDPVSAVHFNRD 759
AH D V V F R+
Sbjct: 621 FAHGDSVMGVKFVRN 635
Score = 52.0 bits (119), Expect = 4e-07
Identities = 20/58 (34%), Positives = 39/58 (67%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
+VS+S DK L+VW+L + C++ + GH + V+ + +P+ +V+GS D+ +R + V+
Sbjct: 163 LVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFYAVK 220
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/70 (34%), Positives = 34/70 (48%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
LIV+ S DK LK+W L G C K++ H + V F ++ + S D V+ WD
Sbjct: 596 LIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADK 655
Query: 694 GKCLKPLPAH 723
+ L L H
Sbjct: 656 FEHLLTLEGH 665
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/79 (26%), Positives = 35/79 (44%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
L+ D ++++W+ G C H V +N +++ SGS D + +WDV
Sbjct: 78 LVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVG 137
Query: 694 GKCLKPLPAHSDPVSAVHF 750
L L H D V+ + F
Sbjct: 138 ESGLFRLRGHRDQVTDLVF 156
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/77 (28%), Positives = 39/77 (50%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
++ S S D + +W++ L L+GH + V F +VS S D+ +R+WD+ T
Sbjct: 120 MLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLET 179
Query: 694 GKCLKPLPAHSDPVSAV 744
C++ + H V +V
Sbjct: 180 QHCMQIVSGHHSEVWSV 196
Score = 44.4 bits (100), Expect = 8e-05
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 684
+ S D+ +K W+ + L TL+GH ++C + + + +V+GS D S+R WD
Sbjct: 639 LFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWD 694
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Frame = +1
Query: 550 VWELSSGKCLKTL-----KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPL 714
+W + G C KTL +G + + S+L+ G D S+RIWD G C
Sbjct: 43 IWHVRQGVCSKTLTPSSSRGGPSLAVTSIASSASSLVAVGYADGSIRIWDTEKGTCEVNF 102
Query: 715 PAHSDPVSAVHFNR 756
+H V+A+ +N+
Sbjct: 103 NSHKGAVTALRYNK 116
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +2
Query: 278 LLHSQTSLQWRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK 457
LL S + + + +L GH V + S +GE + + S DK +KIWG G K
Sbjct: 559 LLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHK 618
Query: 458 TISGH 472
+I H
Sbjct: 619 SIFAH 623
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/60 (36%), Positives = 31/60 (51%)
Frame = +2
Query: 329 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
F L GH V+ + F G+ L SSS DK +++W + +SGH S+V WS D
Sbjct: 142 FRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHH---SEV-WSVD 197
Score = 36.3 bits (80), Expect = 0.022
Identities = 20/77 (25%), Positives = 40/77 (51%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
L++S S + +K+W S+G CL+T+ S Y C PQ+ + G+ + I D+ +
Sbjct: 420 LLMSTSHSE-VKIWNPSTGSCLRTI--DSGYGLCSLIVPQNKYGIVGTKSGVLEIIDIGS 476
Query: 694 GKCLKPLPAHSDPVSAV 744
++ + AH + ++
Sbjct: 477 ATKVEEVKAHGGTIWSI 493
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS 505
++ H +V VKF N +L S D+L+K W A + T+ GH I +A S+
Sbjct: 619 SIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISN 676
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Frame = +1
Query: 532 DDKTLKVWELSSGKCLKTL----KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 699
++ +L+ + L S + KT+ +GH + V + + L++S S E V+IW+ TG
Sbjct: 380 NNNSLEFYSLKSSENAKTVTIEHQGHRSDVRSVTLSEDNTLLMSTSHSE-VKIWNPSTGS 438
Query: 700 CLKPL 714
CL+ +
Sbjct: 439 CLRTI 443
Score = 31.5 bits (68), Expect = 0.63
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Frame = +2
Query: 227 THGGPSASL-SVQIHYHNLL---HSQTSLQ-WRTNY-TLKFTLAGHTKAVSSVKFSPNGE 388
+ GGPS ++ S+ +L+ ++ S++ W T T + H AV++++++ G
Sbjct: 60 SRGGPSLAVTSIASSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGS 119
Query: 389 WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW 499
LAS S D I +W + GH+ ++D+ +
Sbjct: 120 MLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVF 156
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +2
Query: 356 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
V +V SP+ + +A + D +K++ KF ++ GHK+ + + SSD
Sbjct: 543 VLAVAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSD 593
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/71 (33%), Positives = 39/71 (54%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
+ + +AS DKT+K+W + K K L GH +V+ C F+ +V+ S D + R+W +
Sbjct: 224 KYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMP 283
Query: 691 TGKCLKPLPAH 723
GK +K H
Sbjct: 284 AGKEVKVYQGH 294
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = +2
Query: 302 QWRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMG 481
Q T + L H + SP ++LA++S+DK +KIW K EK ++GH+
Sbjct: 196 QTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRW 255
Query: 482 ISDVAWSSD 508
+ D +S D
Sbjct: 256 VWDCVFSVD 264
Score = 41.5 bits (93), Expect = 6e-04
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 702
S S+D T+K+W+L + C K + + V +P ++SG + ++R+WD+R C
Sbjct: 95 SGSEDGTVKIWDLRAPGCQKEYESVAA-VNTVVLHPNQTELISGDQNGNIRVWDLRANSC 153
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/84 (23%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
++ +AS D T++ WE +G+C +T++ ++V P + + + + + +R++DV +
Sbjct: 7 ILATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLEITPDKHYL-AAACNPHIRLFDVNS 65
Query: 694 G--KCLKPLPAHSDPVSAVHFNRD 759
+ + +H++ V AV F D
Sbjct: 66 NSPQPVMTYDSHTNNVMAVGFQCD 89
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 305 WRTN-YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 472
W + + L+ L GH + V FS +GE+L ++S+D ++W GK K GH
Sbjct: 238 WNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGH 294
Score = 36.7 bits (81), Expect = 0.017
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCC 618
+V+AS D T ++W + +GK +K +GH CC
Sbjct: 268 LVTASSDMTARLWSMPAGKEVKVYQGHHKATVCC 301
Score = 35.9 bits (79), Expect = 0.029
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 562 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLK 708
+S + + T H+N V F + + SGS D +V+IWD+R C K
Sbjct: 66 NSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQK 114
Score = 31.5 bits (68), Expect = 0.63
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
T HT V +V F + +W+ S S D +KIW
Sbjct: 73 TYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIW 105
Score = 31.1 bits (67), Expect = 0.84
Identities = 10/42 (23%), Positives = 22/42 (52%)
Frame = +1
Query: 634 SNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRD 759
S ++ + S+D ++R W+ TG+C + + V+ + D
Sbjct: 5 SVILATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLEITPD 46
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 56.0 bits (129), Expect = 3e-08
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRT 693
++SAS DKT+++W++ S CL H++YV FNP N +SGS D VRIW++ +
Sbjct: 342 LLSASMDKTVRLWKVGSNDCLGVF-AHNSYVTSVQFNPVNENYFMSGSIDGKVRIWNI-S 399
Query: 694 GKCLKPLPAHSDPVSAVHFNRD 759
G + D +SAV + D
Sbjct: 400 GCSVVDWADLKDIISAVCYRPD 421
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/61 (34%), Positives = 36/61 (59%)
Frame = +1
Query: 571 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHF 750
K L +GH+ V +++ + N ++S S D++VR+W V + CL AH+ V++V F
Sbjct: 319 KPLYEFRGHTGEVLDISWS-KDNYLLSASMDKTVRLWKVGSNDCLGVF-AHNSYVTSVQF 376
Query: 751 N 753
N
Sbjct: 377 N 377
Score = 35.5 bits (78), Expect = 0.039
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 448
+ H A+ ++KFS +G++LASS D ++++W + K
Sbjct: 217 IKAHDGAILAMKFSNDGKFLASSGEDGIVRVWKVVEDK 254
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 56.0 bits (129), Expect = 3e-08
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVR 690
L++SAS DKT+++W +CL H+NYV C FNP N SGS D RIW +
Sbjct: 285 LLLSASKDKTVRLWRTGCDQCLHVFH-HNNYVTCVEFNPVNKNNFASGSIDGKARIWGLS 343
Query: 691 TGKCLKPLPAHSDPVSAVHF 750
+ + D +SA+ +
Sbjct: 344 EERVVAWTDVR-DSISAISY 362
Score = 36.3 bits (80), Expect = 0.022
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
GH + ++KFSP+G++LA+ D ++KIW
Sbjct: 196 GHKGKIWTLKFSPDGKYLATGGEDGVVKIW 225
Score = 34.3 bits (75), Expect = 0.090
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = +1
Query: 586 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFN 753
L GH+ V ++ SNL++S S D++VR+W +CL H++ V+ V FN
Sbjct: 268 LYGHTGDVLDLAWS-DSNLLLSASKDKTVRLWRTGCDQCLHVF-HHNNYVTCVEFN 321
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +1
Query: 556 ELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
ELS+ ++ + GH ++ F+P + +G D V+IW +
Sbjct: 184 ELSAAYMVQKINGHKGKIWTLKFSPDGKYLATGGEDGVVKIWRI 227
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 55.2 bits (127), Expect = 4e-08
Identities = 21/59 (35%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVR 690
+VS DD +K W+++ + L GH +YV C + +P +++V+GS+D +V++WD R
Sbjct: 151 LVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDAR 209
Score = 34.7 bits (76), Expect = 0.068
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +1
Query: 544 LKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVRTGKCLKPLPA 720
++V+++ L+TL+ HS + Q L +VSG D V+ WDV + L
Sbjct: 117 VQVFDIKERMALRTLRSHSAPARFVKYPVQDKLHLVSGGDDGVVKYWDVAGATVISDLLG 176
Query: 721 HSDPV 735
H D V
Sbjct: 177 HKDYV 181
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 55.2 bits (127), Expect = 4e-08
Identities = 26/76 (34%), Positives = 40/76 (52%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 702
S+ D +VW+L + + + +GH V +F+P + SG D RIWD+R K
Sbjct: 147 SSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKL 206
Query: 703 LKPLPAHSDPVSAVHF 750
L +PAH + VS V +
Sbjct: 207 LYIIPAHVNLVSQVKY 222
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRT 693
+ S +D ++W+L K L + H N V + PQ + + S D +V IW R
Sbjct: 187 LASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRD 246
Query: 694 GKCLKPLPAHSDPVSAV 744
+K L H V+++
Sbjct: 247 FSLVKSLVGHESKVASL 263
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/53 (41%), Positives = 25/53 (47%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW 499
GH K V SV FSPNG LAS D +IW K I H +S V +
Sbjct: 170 GHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKY 222
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 323 LKFTLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW 499
L + + H VS VK+ P + LA++S D + IW D K++ GH+ ++ +
Sbjct: 206 LLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLVGHESKVASLDI 265
Query: 500 SSDA 511
+ D+
Sbjct: 266 AVDS 269
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
+ +AS D+T K+W+ + G L+T K S FD R+WD+RT
Sbjct: 122 LATASTDRTEKIWK-TDGTLLQTFKA------------------SSGFDSLARVWDLRTA 162
Query: 697 KCLKPLPAHSDPVSAVHFN 753
+ + H V +V F+
Sbjct: 163 RNILIFQGHIKQVLSVDFS 181
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 55.2 bits (127), Expect = 4e-08
Identities = 23/80 (28%), Positives = 44/80 (55%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
++ +A D +W++ SGK + LKGH+ ++ + + +++GS D + R+W V
Sbjct: 994 ILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIR--SIRMVEDTLITGSDDWTARVWSVSR 1051
Query: 694 GKCLKPLPAHSDPVSAVHFN 753
G C L H+ PV +V ++
Sbjct: 1052 GSCDAVLACHAGPVQSVEYS 1071
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
+++ SDD T +VW +S G C L H+ V ++P I++GS D +R W+ G
Sbjct: 1035 LITGSDDWTARVWSVSRGSCDAVLACHAGPVQSVEYSPFDKGIITGSADGLLRFWENDEG 1094
Query: 697 --KCLKPLPAHSDPVSAVH 747
KC+K + HS + +++
Sbjct: 1095 GIKCVKNITLHSSSILSIN 1113
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/82 (30%), Positives = 46/82 (56%)
Frame = +1
Query: 508 RRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
R IVS SDD ++ VW+ + + L+ LKGH + V C +++ + D +V++WDV
Sbjct: 909 RGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKM-LSGERVLTAAHDGTVKMWDV 967
Query: 688 RTGKCLKPLPAHSDPVSAVHFN 753
RT C+ + S + ++ ++
Sbjct: 968 RTDMCVATVGRCSSAILSLEYD 989
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/90 (22%), Positives = 47/90 (52%)
Frame = +1
Query: 490 CGMVL*RRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 669
C +L +++A+ D T+K+W++ + C+ T+ S+ + ++ + ++ + D
Sbjct: 944 CVKMLSGERVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGRDTV 1003
Query: 670 VRIWDVRTGKCLKPLPAHSDPVSAVHFNRD 759
IWD+R+GK + L H+ + ++ D
Sbjct: 1004 ANIWDIRSGKQMHKLKGHTKWIRSIRMVED 1033
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG--KFEKTISGHKMGISDV 493
LA H V SV++SP + + + SAD L++ W +G K K I+ H I +
Sbjct: 1058 LACHAGPVQSVEYSPFDKGIITGSADGLLRFWENDEGGIKCVKNITLHSSSILSI 1112
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Frame = +2
Query: 284 HSQTSLQWRTNYTLKFTLAGH-TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT 460
H T W + G + A+ S+++ + LA++ D + IW GK
Sbjct: 958 HDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRSGKQMHK 1017
Query: 461 ISGHKMGISDVAWSSD 508
+ GH I + D
Sbjct: 1018 LKGHTKWIRSIRMVED 1033
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 54.8 bits (126), Expect = 6e-08
Identities = 20/57 (35%), Positives = 35/57 (61%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
S D+ + W++S+G+ ++ +GH V FN S+++VS FD S+R+WD R+
Sbjct: 77 SCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRS 133
Score = 48.0 bits (109), Expect = 7e-06
Identities = 23/78 (29%), Positives = 36/78 (46%)
Frame = +1
Query: 520 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 699
++ D+T+++W G +KT K H V + + S D V WDV TG+
Sbjct: 34 LTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGR 93
Query: 700 CLKPLPAHSDPVSAVHFN 753
++ H V+AV FN
Sbjct: 94 VIRKFRGHDGEVNAVKFN 111
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Frame = +1
Query: 535 DKTLKVWELSSGKCLKTLKGHSNYVF---CCNFNPQSNLIVSGSFDESVRIWDVRTGKCL 705
D TL++ + ++G+ L+ KGH + F CC N ++ ++ GS D V WD+ K L
Sbjct: 205 DSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAH-VIGGSEDGLVFFWDLVDAKVL 263
Query: 706 KPLPAHSDPVSAVHFN 753
AH V++V ++
Sbjct: 264 SKFRAHDLVVTSVSYH 279
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +1
Query: 586 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRD 759
LKGH V FN N ++ D ++R+W+ G +K +H V VH D
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSD 71
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
L GH AV + +F+ +G + + D+ I++W + G KT H + DV +SD
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSD 71
Score = 38.7 bits (86), Expect = 0.004
Identities = 13/55 (23%), Positives = 30/55 (54%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
++ S+D + W+L K L + H V +++P+ + +++ S D ++R+W
Sbjct: 243 VIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTIRVW 297
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKC--LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
++VSA D++L+VW+ S ++ + + V I+ GS D +VR +D+
Sbjct: 116 VVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTKTE--IIGGSVDGTVRTFDM 173
Query: 688 RTGK 699
R G+
Sbjct: 174 RIGR 177
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 54.8 bits (126), Expect = 6e-08
Identities = 22/81 (27%), Positives = 44/81 (54%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
R +++ SDD+ +K+W + + CL + +GH + + + L+ S S D +R+W +
Sbjct: 318 RYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVASASNDFVIRVWRLP 377
Query: 691 TGKCLKPLPAHSDPVSAVHFN 753
G + L H+ V+A+ F+
Sbjct: 378 DGMPISVLRGHTGAVTAIAFS 398
Score = 48.8 bits (111), Expect = 4e-06
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNL--IVSGSFDESVRIWD 684
L+ SAS+D ++VW L G + L+GH+ V F+P Q+++ ++S S D + RIWD
Sbjct: 361 LVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWD 420
Query: 685 VRTGKCLKPL--PAHSD 729
R + L + P+ SD
Sbjct: 421 ARYSQWLPRIYVPSPSD 437
Score = 47.2 bits (107), Expect = 1e-05
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 577 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVS 738
+K L+GH N V+C F+ +++GS D V+IW + T CL H ++
Sbjct: 298 IKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDIT 351
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
L GH AV F +G ++ + S D+L+KIW + GH+ I+D+A SS+
Sbjct: 301 LRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSN 358
Score = 36.3 bits (80), Expect = 0.022
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDV 687
R +++A D + VW + G + L GHS + + +P + +S +D IWD+
Sbjct: 610 RFVLAAIMDCRICVWNAADGSLVHCLTGHSESSYVLDVHPFNPRIAMSAGYDGKTIIWDI 669
Query: 688 RTGKCLK 708
G +K
Sbjct: 670 WEGIPIK 676
Score = 35.1 bits (77), Expect = 0.051
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 502
GH ++ + S N +AS+S D +I++W DG + GH ++ +A+S
Sbjct: 345 GHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFS 398
Score = 34.3 bits (75), Expect = 0.090
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 15/70 (21%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTL---------------KGHSNYVFCCNFNPQSNLIVS 651
++S+SDD T ++W+ + L + S+ + CC +N + V+
Sbjct: 407 LLSSSDDGTCRIWDARYSQWLPRIYVPSPSDANTGSTSNASQSHQILCCAYNANGTIFVT 466
Query: 652 GSFDESVRIW 681
GS D + R+W
Sbjct: 467 GSSDSNARVW 476
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGE---WLASSSADKLIKIWGA 436
L GHT AV+++ FSP L SSS D +IW A
Sbjct: 385 LRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDA 421
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 54.8 bits (126), Expect = 6e-08
Identities = 23/72 (31%), Positives = 40/72 (55%)
Frame = +1
Query: 544 LKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAH 723
L VW+ + + +GH V C ++P S L+ +G+ D V++W+V +G C H
Sbjct: 331 LLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEH 390
Query: 724 SDPVSAVHFNRD 759
++ V+A+HF D
Sbjct: 391 TNAVTALHFMAD 402
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
+L+ + +DD +KVW + SG C T H+N V +F ++ ++S S D +VR WD +
Sbjct: 362 QLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFK 421
Query: 691 TGKCLK 708
K K
Sbjct: 422 RYKNYK 427
Score = 45.2 bits (102), Expect = 5e-05
Identities = 25/76 (32%), Positives = 35/76 (46%)
Frame = +1
Query: 532 DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKP 711
D + VW +G+ L GH V F+P + L+ S S+D +VR+WDV K
Sbjct: 455 DSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVE 514
Query: 712 LPAHSDPVSAVHFNRD 759
H+ V V F D
Sbjct: 515 TFRHNHDVLTVAFRPD 530
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 305 WRTN-YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMG 481
WRT Y LK GH V+ V +SP+ + LA+ + D +K+W G T + H
Sbjct: 336 WRTETYILK--QQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNA 393
Query: 482 ISDVAWSSD 508
++ + + +D
Sbjct: 394 VTALHFMAD 402
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +2
Query: 323 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 502
+K L+GH V + FSP + LASSS D +++W + K H + VA+
Sbjct: 469 IKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFR 528
Query: 503 SD 508
D
Sbjct: 529 PD 530
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/73 (23%), Positives = 33/73 (45%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
+L+ S+S D T+++W++ + K H++ V F P + S + D + WD
Sbjct: 490 QLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTI 549
Query: 691 TGKCLKPLPAHSD 729
G + + D
Sbjct: 550 EGVLMYTIEGRRD 562
Score = 37.1 bits (82), Expect = 0.013
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVF-CCNFNPQSNLIVSGSFDE-SVRIWDVR 690
++SAS D T++ W+ K KT + F +P +++ +G+ D + +W +
Sbjct: 406 LLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCAGTLDSFEIFVWSKK 465
Query: 691 TGKCLKPLPAHSDPVSAVHFN 753
TG+ L H PV + F+
Sbjct: 466 TGQIKDILSGHEAPVHGLMFS 486
Score = 35.9 bits (79), Expect = 0.029
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2
Query: 344 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 475
H V +V F P+G+ LASS+ D I W +G TI G +
Sbjct: 518 HNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEGRR 561
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +2
Query: 356 VSSVKFSPNGEWLASSSADKLIKIW 430
V ++KFSPNG+++A KL++IW
Sbjct: 96 VGALKFSPNGKFIA-VGIGKLVEIW 119
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 54.8 bits (126), Expect = 6e-08
Identities = 23/72 (31%), Positives = 40/72 (55%)
Frame = +1
Query: 544 LKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAH 723
L VW+ + + +GH V C ++P S L+ +G+ D V++W+V +G C H
Sbjct: 371 LLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEH 430
Query: 724 SDPVSAVHFNRD 759
++ V+A+HF D
Sbjct: 431 TNAVTALHFMAD 442
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
+L+ + +DD +KVW + SG C T H+N V +F ++ ++S S D +VR WD +
Sbjct: 402 QLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFK 461
Query: 691 TGKCLK 708
K K
Sbjct: 462 RYKNYK 467
Score = 45.2 bits (102), Expect = 5e-05
Identities = 25/76 (32%), Positives = 35/76 (46%)
Frame = +1
Query: 532 DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKP 711
D + VW +G+ L GH V F+P + L+ S S+D +VR+WDV K
Sbjct: 495 DSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVE 554
Query: 712 LPAHSDPVSAVHFNRD 759
H+ V V F D
Sbjct: 555 TFRHNHDVLTVAFRPD 570
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 305 WRTN-YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMG 481
WRT Y LK GH V+ V +SP+ + LA+ + D +K+W G T + H
Sbjct: 376 WRTETYILK--QQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNA 433
Query: 482 ISDVAWSSD 508
++ + + +D
Sbjct: 434 VTALHFMAD 442
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +2
Query: 323 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 502
+K L+GH V + FSP + LASSS D +++W + K H + VA+
Sbjct: 509 IKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFR 568
Query: 503 SD 508
D
Sbjct: 569 PD 570
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/73 (23%), Positives = 33/73 (45%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
+L+ S+S D T+++W++ + K H++ V F P + S + D + WD
Sbjct: 530 QLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTI 589
Query: 691 TGKCLKPLPAHSD 729
G + + D
Sbjct: 590 EGVLMYTIEGRRD 602
Score = 37.1 bits (82), Expect = 0.013
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVF-CCNFNPQSNLIVSGSFDE-SVRIWDVR 690
++SAS D T++ W+ K KT + F +P +++ +G+ D + +W +
Sbjct: 446 LLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCAGTLDSFEIFVWSKK 505
Query: 691 TGKCLKPLPAHSDPVSAVHFN 753
TG+ L H PV + F+
Sbjct: 506 TGQIKDILSGHEAPVHGLMFS 526
Score = 35.9 bits (79), Expect = 0.029
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2
Query: 344 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 475
H V +V F P+G+ LASS+ D I W +G TI G +
Sbjct: 558 HNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEGRR 601
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +2
Query: 356 VSSVKFSPNGEWLASSSADKLIKIW 430
V ++KFSPNG+++A KL++IW
Sbjct: 96 VGALKFSPNGKFIA-VGIGKLVEIW 119
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 54.4 bits (125), Expect = 8e-08
Identities = 25/80 (31%), Positives = 42/80 (52%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
++VS +K L+VW+ +G L+GH++ V + +SGS D +R+WD+
Sbjct: 227 MLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQ 286
Query: 694 GKCLKPLPAHSDPVSAVHFN 753
+CL H+D V A+ N
Sbjct: 287 QRCLHTYAVHTDSVWALACN 306
Score = 54.0 bits (124), Expect = 1e-07
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Frame = +1
Query: 517 IVSASDDKTLKVWE-LSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVR 690
+VS S D T+K W+ LS G C +TL+ HS+YV C + +N++ SG V IWD+
Sbjct: 98 LVSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDIE 157
Query: 691 T--GKCLKPLPAHSDPVS 738
KP A+ D S
Sbjct: 158 AALSPVTKPNDANEDSSS 175
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
R +S S D +++W+L +CL T H++ V+ NP + + SG D+ + + D+
Sbjct: 268 RFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDLA 327
Query: 691 T 693
T
Sbjct: 328 T 328
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +1
Query: 589 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPV 735
KGH V+ N ++VSG ++ +R+WD RTG L H+D V
Sbjct: 210 KGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNV 258
Score = 31.1 bits (67), Expect = 0.84
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 472
GH ++V ++ + G L S +K++++W G + GH
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGH 254
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
L GHT V + G + S S+D +I++W
Sbjct: 251 LRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLW 282
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 54.4 bits (125), Expect = 8e-08
Identities = 25/80 (31%), Positives = 42/80 (52%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
++VS +K L+VW+ +G L+GH++ V + +SGS D +R+WD+
Sbjct: 227 MLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQ 286
Query: 694 GKCLKPLPAHSDPVSAVHFN 753
+CL H+D V A+ N
Sbjct: 287 QRCLHTYAVHTDSVWALACN 306
Score = 54.0 bits (124), Expect = 1e-07
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Frame = +1
Query: 517 IVSASDDKTLKVWE-LSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVR 690
+VS S D T+K W+ LS G C +TL+ HS+YV C + +N++ SG V IWD+
Sbjct: 98 LVSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDIE 157
Query: 691 T--GKCLKPLPAHSDPVS 738
KP A+ D S
Sbjct: 158 AALSPVTKPNDANEDSSS 175
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
R +S S D +++W+L +CL T H++ V+ NP + + SG D+ + + D+
Sbjct: 268 RFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDLA 327
Query: 691 T 693
T
Sbjct: 328 T 328
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +1
Query: 589 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPV 735
KGH V+ N ++VSG ++ +R+WD RTG L H+D V
Sbjct: 210 KGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNV 258
Score = 31.1 bits (67), Expect = 0.84
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 472
GH ++V ++ + G L S +K++++W G + GH
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGH 254
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
L GHT V + G + S S+D +I++W
Sbjct: 251 LRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLW 282
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Frame = +1
Query: 517 IVSASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDV 687
++S+S D+T+++W + SS +C++ H ++V C FNP N +SGS D VRIWDV
Sbjct: 377 LLSSSVDETVRLWRVGSSDECIRVF-SHKSFVTCVAFNPVDDNYFISGSIDGKVRIWDV 434
Score = 31.1 bits (67), Expect = 0.84
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 589 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV-RTGKCLKPLPAHSDPVSAVHFN 753
+GH+ + +++ + ++S S DE+VR+W V + +C++ +H V+ V FN
Sbjct: 360 RGHTGEILDLSWS-EKGFLLSSSVDETVRLWRVGSSDECIRVF-SHKSFVTCVAFN 413
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = +2
Query: 338 AGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
+ H ++ +KFS +G++LAS+ D ++++W
Sbjct: 254 SAHDGSIVVMKFSHDGKYLASAGEDCVVRVW 284
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
+L+ SA DK + +W + + + T + H++ + F P S + + SFD++++IWD
Sbjct: 521 KLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDAS 580
Query: 691 -TGKCLKPLPAHSDPVSAVHFN 753
G L+ + H+ PV ++ F+
Sbjct: 581 DPGYFLRTISGHAAPVMSIDFH 602
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +2
Query: 344 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDV 493
H ++ V+F PN LA+SS DK IKIW A D G F +TISGH + +
Sbjct: 549 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSI 599
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSS-GKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVR 690
+ ++S DKT+K+W+ S G L+T+ GH+ V +F+P ++ L+ S + +R WD+
Sbjct: 565 LATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI- 623
Query: 691 TGKCLKPLPAHSDPV 735
C++ + S V
Sbjct: 624 NASCVRAVKGASTQV 638
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVR 690
L+ S S+D +K+W LSSG C+ L N F+P +L+V G + +++ +W+
Sbjct: 689 LVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGY-QAIELWNTM 746
Query: 691 TGKCLKPLPAHSDPVSAV 744
KC+ + H +SA+
Sbjct: 747 ENKCM-TVAGHECVISAL 763
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/79 (24%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 520 VSASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
++A+ + T+ ++++ ++ K + KGHS+ V ++P L+ S S +++V++W + +G
Sbjct: 648 LAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVS-EDAVKLWSLSSG 706
Query: 697 KCLKPLPAHSDPVSAVHFN 753
C+ L + +V F+
Sbjct: 707 DCIHELSNSGNKFHSVVFH 725
Score = 36.7 bits (81), Expect = 0.017
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 538 KTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
+ +++W KC+ T+ GH + +P + ++ S S D+SV+IW
Sbjct: 738 QAIELWNTMENKCM-TVAGHECVISALAQSPSTGVVASASHDKSVKIW 784
Score = 36.7 bits (81), Expect = 0.017
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 305 WRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
W T T+AGH +S++ SP+ +AS+S DK +KIW
Sbjct: 743 WNTMENKCMTVAGHECVISALAQSPSTGVVASASHDKSVKIW 784
Score = 35.5 bits (78), Expect = 0.039
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--FEKTISGHK 475
GH+ V SV +SPNGE +AS S D +K+W G E + SG+K
Sbjct: 673 GHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNK 718
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/76 (23%), Positives = 36/76 (47%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 702
S+ +T K + + C++ ++ V CC+F+ L+ S D+ V IW++ T +
Sbjct: 486 SSVHTETSKPFSFNEVSCIRK---SASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQV 542
Query: 703 LKPLPAHSDPVSAVHF 750
H+ ++ V F
Sbjct: 543 ESTPEEHAHIITDVRF 558
Score = 31.5 bits (68), Expect = 0.63
Identities = 24/86 (27%), Positives = 38/86 (44%)
Frame = +2
Query: 236 GPSASLSVQIHYHNLLHSQTSLQWRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADK 415
G SL + ++ +H++TS + N + V FS +G+ LAS+ DK
Sbjct: 473 GDGGSLFGTLKRNSSVHTETSKPFSFNEVS--CIRKSASKVICCSFSYDGKLLASAGHDK 530
Query: 416 LIKIWGAYDGKFEKTISGHKMGISDV 493
+ IW + E T H I+DV
Sbjct: 531 KVFIWNMETLQVESTPEEHAHIITDV 556
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
+L+ SA DK + +W + + + T + H++ + F P S + + SFD++++IWD
Sbjct: 523 KLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDAS 582
Query: 691 -TGKCLKPLPAHSDPVSAVHFN 753
G L+ + H+ PV ++ F+
Sbjct: 583 DPGYFLRTISGHAAPVMSIDFH 604
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +2
Query: 344 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDV 493
H ++ V+F PN LA+SS DK IKIW A D G F +TISGH + +
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSI 601
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSS-GKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVR 690
+ ++S DKT+K+W+ S G L+T+ GH+ V +F+P ++ L+ S + +R WD+
Sbjct: 567 LATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI- 625
Query: 691 TGKCLKPLPAHSDPV 735
C++ + S V
Sbjct: 626 NASCVRAVKGASTQV 640
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVR 690
L+ S S+D +K+W LSSG C+ L N F+P +L+V G + +++ +W+
Sbjct: 691 LVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGY-QAIELWNTM 748
Query: 691 TGKCLKPLPAHSDPVSAV 744
KC+ + H +SA+
Sbjct: 749 ENKCM-TVAGHECVISAL 765
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/79 (24%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 520 VSASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
++A+ + T+ ++++ ++ K + KGHS+ V ++P L+ S S +++V++W + +G
Sbjct: 650 LAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVS-EDAVKLWSLSSG 708
Query: 697 KCLKPLPAHSDPVSAVHFN 753
C+ L + +V F+
Sbjct: 709 DCIHELSNSGNKFHSVVFH 727
Score = 36.7 bits (81), Expect = 0.017
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 538 KTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
+ +++W KC+ T+ GH + +P + ++ S S D+SV+IW
Sbjct: 740 QAIELWNTMENKCM-TVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 36.7 bits (81), Expect = 0.017
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 305 WRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
W T T+AGH +S++ SP+ +AS+S DK +KIW
Sbjct: 745 WNTMENKCMTVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 35.5 bits (78), Expect = 0.039
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--FEKTISGHK 475
GH+ V SV +SPNGE +AS S D +K+W G E + SG+K
Sbjct: 675 GHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNK 720
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/76 (23%), Positives = 36/76 (47%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 702
S+ +T K + + C++ ++ V CC+F+ L+ S D+ V IW++ T +
Sbjct: 488 SSVHTETSKPFSFNEVSCIRK---SASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQV 544
Query: 703 LKPLPAHSDPVSAVHF 750
H+ ++ V F
Sbjct: 545 ESTPEEHAHIITDVRF 560
Score = 31.5 bits (68), Expect = 0.63
Identities = 24/86 (27%), Positives = 38/86 (44%)
Frame = +2
Query: 236 GPSASLSVQIHYHNLLHSQTSLQWRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADK 415
G SL + ++ +H++TS + N + V FS +G+ LAS+ DK
Sbjct: 475 GDGGSLFGTLKRNSSVHTETSKPFSFNEVS--CIRKSASKVICCSFSYDGKLLASAGHDK 532
Query: 416 LIKIWGAYDGKFEKTISGHKMGISDV 493
+ IW + E T H I+DV
Sbjct: 533 KVFIWNMETLQVESTPEEHAHIITDV 558
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
+L+ SA DK + +W + + + T + H++ + F P S + + SFD++++IWD
Sbjct: 523 KLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDAS 582
Query: 691 -TGKCLKPLPAHSDPVSAVHFN 753
G L+ + H+ PV ++ F+
Sbjct: 583 DPGYFLRTISGHAAPVMSIDFH 604
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +2
Query: 344 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDV 493
H ++ V+F PN LA+SS DK IKIW A D G F +TISGH + +
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSI 601
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSS-GKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVR 690
+ ++S DKT+K+W+ S G L+T+ GH+ V +F+P ++ L+ S + +R WD+
Sbjct: 567 LATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI- 625
Query: 691 TGKCLKPLPAHSDPV 735
C++ + S V
Sbjct: 626 NASCVRAVKGASTQV 640
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVR 690
L+ S S+D +K+W LSSG C+ L N F+P +L+V G + +++ +W+
Sbjct: 691 LVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGY-QAIELWNTM 748
Query: 691 TGKCLKPLPAHSDPVSAV 744
KC+ + H +SA+
Sbjct: 749 ENKCM-TVAGHECVISAL 765
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/79 (24%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 520 VSASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
++A+ + T+ ++++ ++ K + KGHS+ V ++P L+ S S +++V++W + +G
Sbjct: 650 LAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVS-EDAVKLWSLSSG 708
Query: 697 KCLKPLPAHSDPVSAVHFN 753
C+ L + +V F+
Sbjct: 709 DCIHELSNSGNKFHSVVFH 727
Score = 36.7 bits (81), Expect = 0.017
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 538 KTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
+ +++W KC+ T+ GH + +P + ++ S S D+SV+IW
Sbjct: 740 QAIELWNTMENKCM-TVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 36.7 bits (81), Expect = 0.017
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 305 WRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
W T T+AGH +S++ SP+ +AS+S DK +KIW
Sbjct: 745 WNTMENKCMTVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 35.5 bits (78), Expect = 0.039
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--FEKTISGHK 475
GH+ V SV +SPNGE +AS S D +K+W G E + SG+K
Sbjct: 675 GHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNK 720
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/76 (23%), Positives = 36/76 (47%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 702
S+ +T K + + C++ ++ V CC+F+ L+ S D+ V IW++ T +
Sbjct: 488 SSVHTETSKPFSFNEVSCIRK---SASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQV 544
Query: 703 LKPLPAHSDPVSAVHF 750
H+ ++ V F
Sbjct: 545 ESTPEEHAHIITDVRF 560
Score = 31.5 bits (68), Expect = 0.63
Identities = 24/86 (27%), Positives = 38/86 (44%)
Frame = +2
Query: 236 GPSASLSVQIHYHNLLHSQTSLQWRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADK 415
G SL + ++ +H++TS + N + V FS +G+ LAS+ DK
Sbjct: 475 GDGGSLFGTLKRNSSVHTETSKPFSFNEVS--CIRKSASKVICCSFSYDGKLLASAGHDK 532
Query: 416 LIKIWGAYDGKFEKTISGHKMGISDV 493
+ IW + E T H I+DV
Sbjct: 533 KVFIWNMETLQVESTPEEHAHIITDV 558
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
+L+ SA DK + +W + + + T + H++ + F P S + + SFD++++IWD
Sbjct: 523 KLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDAS 582
Query: 691 -TGKCLKPLPAHSDPVSAVHFN 753
G L+ + H+ PV ++ F+
Sbjct: 583 DPGYFLRTISGHAAPVMSIDFH 604
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +2
Query: 344 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDV 493
H ++ V+F PN LA+SS DK IKIW A D G F +TISGH + +
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSI 601
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSS-GKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVR 690
+ ++S DKT+K+W+ S G L+T+ GH+ V +F+P ++ L+ S + +R WD+
Sbjct: 567 LATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI- 625
Query: 691 TGKCLKPLPAHSDPV 735
C++ + S V
Sbjct: 626 NASCVRAVKGASTQV 640
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVR 690
L+ S S+D +K+W LSSG C+ L N F+P +L+V G + +++ +W+
Sbjct: 691 LVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGY-QAIELWNTM 748
Query: 691 TGKCLKPLPAHSDPVSAV 744
KC+ + H +SA+
Sbjct: 749 ENKCM-TVAGHECVISAL 765
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/79 (24%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 520 VSASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
++A+ + T+ ++++ ++ K + KGHS+ V ++P L+ S S +++V++W + +G
Sbjct: 650 LAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVS-EDAVKLWSLSSG 708
Query: 697 KCLKPLPAHSDPVSAVHFN 753
C+ L + +V F+
Sbjct: 709 DCIHELSNSGNKFHSVVFH 727
Score = 36.7 bits (81), Expect = 0.017
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 538 KTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
+ +++W KC+ T+ GH + +P + ++ S S D+SV+IW
Sbjct: 740 QAIELWNTMENKCM-TVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 36.7 bits (81), Expect = 0.017
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 305 WRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
W T T+AGH +S++ SP+ +AS+S DK +KIW
Sbjct: 745 WNTMENKCMTVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 35.5 bits (78), Expect = 0.039
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--FEKTISGHK 475
GH+ V SV +SPNGE +AS S D +K+W G E + SG+K
Sbjct: 675 GHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNK 720
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/76 (23%), Positives = 36/76 (47%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 702
S+ +T K + + C++ ++ V CC+F+ L+ S D+ V IW++ T +
Sbjct: 488 SSVHTETSKPFSFNEVSCIRK---SASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQV 544
Query: 703 LKPLPAHSDPVSAVHF 750
H+ ++ V F
Sbjct: 545 ESTPEEHAHIITDVRF 560
Score = 31.5 bits (68), Expect = 0.63
Identities = 24/86 (27%), Positives = 38/86 (44%)
Frame = +2
Query: 236 GPSASLSVQIHYHNLLHSQTSLQWRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADK 415
G SL + ++ +H++TS + N + V FS +G+ LAS+ DK
Sbjct: 475 GDGGSLFGTLKRNSSVHTETSKPFSFNEVS--CIRKSASKVICCSFSYDGKLLASAGHDK 532
Query: 416 LIKIWGAYDGKFEKTISGHKMGISDV 493
+ IW + E T H I+DV
Sbjct: 533 KVFIWNMETLQVESTPEEHAHIITDV 558
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
+L+ SA DK + +W + + + T + H++ + F P S + + SFD++++IWD
Sbjct: 523 KLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDAS 582
Query: 691 -TGKCLKPLPAHSDPVSAVHFN 753
G L+ + H+ PV ++ F+
Sbjct: 583 DPGYFLRTISGHAAPVMSIDFH 604
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +2
Query: 344 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDV 493
H ++ V+F PN LA+SS DK IKIW A D G F +TISGH + +
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSI 601
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSS-GKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVR 690
+ ++S DKT+K+W+ S G L+T+ GH+ V +F+P ++ L+ S + +R WD+
Sbjct: 567 LATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI- 625
Query: 691 TGKCLKPLPAHSDPV 735
C++ + S V
Sbjct: 626 NASCVRAVKGASTQV 640
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVR 690
L+ S S+D +K+W LSSG C+ L N F+P +L+V G + +++ +W+
Sbjct: 691 LVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGY-QAIELWNTM 748
Query: 691 TGKCLKPLPAHSDPVSAV 744
KC+ + H +SA+
Sbjct: 749 ENKCM-TVAGHECVISAL 765
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/79 (24%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 520 VSASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
++A+ + T+ ++++ ++ K + KGHS+ V ++P L+ S S +++V++W + +G
Sbjct: 650 LAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVS-EDAVKLWSLSSG 708
Query: 697 KCLKPLPAHSDPVSAVHFN 753
C+ L + +V F+
Sbjct: 709 DCIHELSNSGNKFHSVVFH 727
Score = 36.7 bits (81), Expect = 0.017
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +1
Query: 538 KTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
+ +++W KC+ T+ GH + +P + ++ S S D+SV+IW
Sbjct: 740 QAIELWNTMENKCM-TVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 36.7 bits (81), Expect = 0.017
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +2
Query: 305 WRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
W T T+AGH +S++ SP+ +AS+S DK +KIW
Sbjct: 745 WNTMENKCMTVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 35.5 bits (78), Expect = 0.039
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--FEKTISGHK 475
GH+ V SV +SPNGE +AS S D +K+W G E + SG+K
Sbjct: 675 GHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNK 720
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/76 (23%), Positives = 36/76 (47%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 702
S+ +T K + + C++ ++ V CC+F+ L+ S D+ V IW++ T +
Sbjct: 488 SSVHTETSKPFSFNEVSCIRK---SASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQV 544
Query: 703 LKPLPAHSDPVSAVHF 750
H+ ++ V F
Sbjct: 545 ESTPEEHAHIITDVRF 560
Score = 31.5 bits (68), Expect = 0.63
Identities = 24/86 (27%), Positives = 38/86 (44%)
Frame = +2
Query: 236 GPSASLSVQIHYHNLLHSQTSLQWRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADK 415
G SL + ++ +H++TS + N + V FS +G+ LAS+ DK
Sbjct: 475 GDGGSLFGTLKRNSSVHTETSKPFSFNEVS--CIRKSASKVICCSFSYDGKLLASAGHDK 532
Query: 416 LIKIWGAYDGKFEKTISGHKMGISDV 493
+ IW + E T H I+DV
Sbjct: 533 KVFIWNMETLQVESTPEEHAHIITDV 558
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 53.6 bits (123), Expect = 1e-07
Identities = 23/80 (28%), Positives = 45/80 (56%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
R++ S SDD + + + L ++ GH+++V + +P I +GS D +VR+WD++
Sbjct: 214 RVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLK 273
Query: 691 TGKCLKPLPAHSDPVSAVHF 750
++ + H+D V +V F
Sbjct: 274 MRAAIQTMSNHNDQVWSVAF 293
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/79 (30%), Positives = 38/79 (48%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
L+++ S D+T+K+W ++T GHS V +P + S S D VR++DV T
Sbjct: 32 LLLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDT 91
Query: 694 GKCLKPLPAHSDPVSAVHF 750
+ L A V + F
Sbjct: 92 NATIAVLEAPPSEVWGMQF 110
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/65 (32%), Positives = 36/65 (55%)
Frame = +2
Query: 320 TLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW 499
TL +++GHT V SV SP+G +A+ S+D+ +++W +T+S H + VA+
Sbjct: 234 TLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAF 293
Query: 500 SSDAG 514
G
Sbjct: 294 RPPGG 298
Score = 35.9 bits (79), Expect = 0.029
Identities = 17/62 (27%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP------QSNLIVSGSFDESVRI 678
I + S D+T+++W+L ++T+ H++ V+ F P ++ + S S D+SV +
Sbjct: 258 IATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPGGTGVRAGRLASVSDDKSVSL 317
Query: 679 WD 684
+D
Sbjct: 318 YD 319
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +2
Query: 350 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 502
K V SV +SPNG+ LA S D I ++ K + GH M + + +S
Sbjct: 159 KFVLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFS 209
Score = 32.7 bits (71), Expect = 0.27
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRT 693
+ S D T+ V+++ K L L+GH+ V F+P ++ SGS D V + D
Sbjct: 173 LACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEG 232
Query: 694 GKCLKPLPAHSDPVSAVHFNRD 759
L + H+ V +V + D
Sbjct: 233 KTLLGSMSGHTSWVLSVDASPD 254
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/78 (33%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRT 693
I S+S DKT++VWELS G C++ + G S +C F+P +N + +G+ ++ + +++ T
Sbjct: 231 IASSSLDKTIRVWELSRGVCIRVIYGISPQ-YCIRFHPVNNNFLSAGNANKELTVFNFST 289
Query: 694 GKCLKPLPAHSDPVSAVH 747
G+ +K L + S H
Sbjct: 290 GRIIKKLLFEDEVTSMDH 307
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
L ASD L LK L GHS V +F+ + I S S D+++R+W++
Sbjct: 188 LAYGASDGSLTVCSLLEEPSVLKQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSR 247
Query: 694 GKCLK 708
G C++
Sbjct: 248 GVCIR 252
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG 469
L GH+K V+ FS N +++ASSS DK I++W G + I G
Sbjct: 212 LTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIYG 256
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGK--CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
IV+ S+D + ++L+ K C+ L+GH V C +N NL+ S F V +W
Sbjct: 419 IVAGSEDSNVYFYDLTKPKHTCVNKLQGHRFPVMCVAWNHGENLLASSDFYGVVIVW 475
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRT 693
I S S+D + +W L + K L+ L GHS V C ++NP++ ++ S S D+++RIW
Sbjct: 458 IASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIWG--P 515
Query: 694 GKCLKPL 714
GK KPL
Sbjct: 516 GKPNKPL 522
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Frame = +1
Query: 544 LKVWELSSGKCLKTLK--GH--SNYVF-CCNFNPQSNLIVSGSFDESVRIWDVRTGKCLK 708
+ +W+L+ G+ + LK GH S YV C S+ I SGS D V IW+++ K L+
Sbjct: 421 IHLWDLA-GEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLE 479
Query: 709 PLPAHSDPVSAVHFN 753
L HS V+ V +N
Sbjct: 480 VLSGHSMTVNCVSWN 494
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 323 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMG--ISDVA 496
LK TL H VS V +SP+ L + +++K+W G T + G +S A
Sbjct: 261 LKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNTGFTVSSCA 320
Query: 497 WSSDA 511
W D+
Sbjct: 321 WFPDS 325
Score = 35.1 bits (77), Expect = 0.051
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWE-LSSGKC-LK-TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
+ + +AS D T +W+ L K LK TL+ H N V +++P +++ E +++W
Sbjct: 237 KYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLW 296
Query: 682 DVRTG 696
DV TG
Sbjct: 297 DVDTG 301
Score = 34.7 bits (76), Expect = 0.068
Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWG 433
L+GH+ V+ V ++P N LAS+S D+ I+IWG
Sbjct: 481 LSGHSMTVNCVSWNPKNPRMLASASDDQTIRIWG 514
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 323 LKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW 499
LKF+ +K V F + ++AS S D + IW + K + +SGH M ++ V+W
Sbjct: 434 LKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSW 493
Query: 500 S 502
+
Sbjct: 494 N 494
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/63 (36%), Positives = 37/63 (58%)
Frame = +1
Query: 556 ELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPV 735
++ + K + TL+GH+ V N++P +++ SGS D +V IW++RTG C L H V
Sbjct: 104 DVENWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLV 163
Query: 736 SAV 744
V
Sbjct: 164 KGV 166
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/62 (33%), Positives = 28/62 (45%)
Frame = +2
Query: 314 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDV 493
N+ TL GHT V + +SP+ LAS S D + IW G + GH + V
Sbjct: 107 NWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGV 166
Query: 494 AW 499
W
Sbjct: 167 TW 168
Score = 44.4 bits (100), Expect = 8e-05
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
++ S S D T+ +W + +G C L+GH + V ++P + I S S D++V IW
Sbjct: 132 MLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIASQSDDKTVIIW 187
Score = 35.9 bits (79), Expect = 0.029
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 472
L GH V V + P G ++AS S DK + IW D GH
Sbjct: 156 LRGHLSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGH 201
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYV-FCCNFNPQSNLIVSGSFDESVRIWDVR 690
+++AS D+T+KVW++ KC L GH+ V C+ S+L+VSGS D +WD+R
Sbjct: 143 LLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDLR 201
Score = 34.7 bits (76), Expect = 0.068
Identities = 13/50 (26%), Positives = 28/50 (56%)
Frame = +1
Query: 595 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAV 744
H N +F ++ + +++ S D+++++WDV KC L H+ V ++
Sbjct: 127 HYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSM 176
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 374 SPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGISDVAWS 502
SP+GE++ S S+D IW + + I GH ++ V WS
Sbjct: 347 SPDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWS 390
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/43 (25%), Positives = 20/43 (46%)
Frame = +2
Query: 344 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 472
H A+ + + L ++S D+ IK+W + K + GH
Sbjct: 127 HYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGH 169
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/81 (28%), Positives = 43/81 (53%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
R +++ SDD+ +KVW + + CL + +GH + + + I S S D +R+W +
Sbjct: 258 RYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIASASNDCVIRVWRLP 317
Query: 691 TGKCLKPLPAHSDPVSAVHFN 753
G + L H+ V+A+ F+
Sbjct: 318 DGLPVSVLRGHTGAVTAIAFS 338
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN---LIVSGSFDESVRIWDV 687
I SAS+D ++VW L G + L+GH+ V F+P+ ++S S D + RIWD
Sbjct: 302 IASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIWDA 361
Query: 688 R 690
R
Sbjct: 362 R 362
Score = 43.6 bits (98), Expect = 1e-04
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 577 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVS 738
+K L+GH N V+C + +++GS D V++W + T CL H ++
Sbjct: 238 IKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDIT 291
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
L GH AV +G ++ + S D+L+K+W + GH+ I+D+A SS+
Sbjct: 241 LRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSN 298
Score = 36.7 bits (81), Expect = 0.017
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDAG 514
GH ++ + S N ++AS+S D +I++W DG + GH ++ +A+S G
Sbjct: 285 GHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPG 342
Score = 36.7 bits (81), Expect = 0.017
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGH--SNYVFCCN-FNPQSNLIVSGSFDESVRIW 681
R +++A D + VW S G + +L GH S YV + FNP+ + +S +D +W
Sbjct: 557 RFVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMDVHPFNPR--IAMSAGYDGKTIVW 614
Query: 682 DVRTG 696
D+ G
Sbjct: 615 DIWEG 619
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +1
Query: 598 SNYVFCCNFNPQSNLIVSGSFDESVRIWDV----RTGKCLKPLPAHSDPVSAVHFN 753
S+ +FCC FN ++ V+GS D R++ V +T P H V A H N
Sbjct: 393 SHQIFCCAFNASGSVFVTGSSDTLARVYSVWSANKTNTDDPEQPNHEMDVLAGHEN 448
Score = 31.9 bits (69), Expect = 0.48
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTI 463
L GHT AV+++ FSP + L SSS D +IW A +F I
Sbjct: 325 LRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIWDARGAQFAPRI 370
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 52.4 bits (120), Expect = 3e-07
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Frame = +1
Query: 454 KDNIWPQNGDQ*CGMVL*RRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 633
K +W ++ D + + I S S DKTLK+W S +C +++K H + V +
Sbjct: 187 KKRLWIEHADAVTALAVSDGFIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVS-T 245
Query: 634 SNLIVSGSFDESVRIWDVRTGK----CLKPLPAHSDPVSAVHFNRD 759
+ + +GS D +R+W TG+ + L H V+A+ N D
Sbjct: 246 NGTVYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDD 291
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Frame = +1
Query: 514 LIVSASDDKTLKVWE---LSSGKCLK-TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
++ S S D+++ VWE S+ ++ L+GH + FN S+L++SGS D +VRIW
Sbjct: 294 VLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSL-FNV-SDLLLSGSADRTVRIW 351
Query: 682 ---DVRTGKCLKPLPAHSDPVSAV 744
+ CL+ L H+ PV ++
Sbjct: 352 RRGPDSSYSCLEVLSGHTKPVKSL 375
Score = 37.9 bits (84), Expect = 0.007
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Frame = +1
Query: 514 LIVSASDDKTLKVWEL---SSGKCLKTLKGHSNYVFCCNFNPQSNL-----IVSGSFDES 669
L++S S D+T+++W SS CL+ L GH+ V + L I+SGS D
Sbjct: 338 LLLSGSADRTVRIWRRGPDSSYSCLEVLSGHTKPVKSLAAVREKELDDVVSIISGSLDGE 397
Query: 670 VRIWDVRTGK 699
V+ W V K
Sbjct: 398 VKCWKVSVTK 407
Score = 35.1 bits (77), Expect = 0.051
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGK----CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 684
+ + S D+ ++VW +G+ + TL+ H + V N +++ SGS D S+ +W+
Sbjct: 249 VYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWE 308
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Frame = +2
Query: 311 TNY-TLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW-GAYDGKFE--KTISGHKM 478
+NY ++ L GH KA+ S+ F+ + + L S SAD+ ++IW D + + +SGH
Sbjct: 313 SNYMAVRGALRGHDKAILSL-FNVS-DLLLSGSADRTVRIWRRGPDSSYSCLEVLSGHTK 370
Query: 479 GISDVA 496
+ +A
Sbjct: 371 PVKSLA 376
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 52.0 bits (119), Expect = 4e-07
Identities = 18/50 (36%), Positives = 33/50 (66%)
Frame = +1
Query: 595 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAV 744
H++ V C + N + L+ S S+D ++++W + KCL+ +PAH D V++V
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSV 254
Score = 44.8 bits (101), Expect = 6e-05
Identities = 20/56 (35%), Positives = 35/56 (62%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
L+ SAS D+T+KVW ++ KCL+++ H + V ++ ++ SGS D +V+ W
Sbjct: 220 LLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVVSTTEA-IVFSGSADGTVKAW 274
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 11/69 (15%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSG--KCLKTLKGHSNYVFCCNFNPQSN---------LIVSGSF 660
L+ S S DKT+ VW+ CL L GH+ V C ++ SGS
Sbjct: 350 LVFSGSADKTICVWKRDGNIHTCLSVLTGHTGPVKCLAVEADREASERRDKKWIVYSGSL 409
Query: 661 DESVRIWDV 687
D+SV++W V
Sbjct: 410 DKSVKVWGV 418
Score = 35.5 bits (78), Expect = 0.039
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +1
Query: 586 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW--DVRTGKCLKPLPAHSDPVSAVHFNRD 759
LKGH V C +L+ SGS D+++ +W D CL L H+ PV + D
Sbjct: 334 LKGHKLAVLCLEV--AGSLVFSGSADKTICVWKRDGNIHTCLSVLTGHTGPVKCLAVEAD 391
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +2
Query: 344 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDA 511
H AVS + + L S+S D+ IK+W D K ++I H ++ V +++A
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVVSTTEA 260
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 51.2 bits (117), Expect = 7e-07
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 514 LIVSASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
L++SA D +K+W++ +SGKC++T GH+ V F+ + ++ +D++++ WD
Sbjct: 297 LLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTE 356
Query: 691 TGKCLKPLPAHSDPVSAVHFNRD 759
TG+ + P V N D
Sbjct: 357 TGQVISTFSTGKIPY-VVKLNPD 378
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +1
Query: 520 VSASDDKTLKVWELSSGKCLKTLK-GHSNYVFCCN-FNPQSNLIVSGSFDESVRIWDVRT 693
++A DK +K W+ +G+ + T G YV N + + N++++G D+ + WD+ T
Sbjct: 342 LTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDINT 401
Query: 694 GKCLKPLPAHSDPVSAVHF 750
G+ + H V+ + F
Sbjct: 402 GEVTQEYDQHLGAVNTITF 420
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
R V++SDDK+L+VWE +K + + H + + + +P N + + S D + I+
Sbjct: 425 RRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNGNWLAAQSLDNQILIYST 484
Query: 688 R 690
R
Sbjct: 485 R 485
Score = 35.1 bits (77), Expect = 0.051
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKM 478
T GH KAV + FS +G ++ DK IK W G+ T S K+
Sbjct: 321 TYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKI 369
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +2
Query: 323 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA---YDGKFEKTISGH 472
+K+ H ++ S+ PNG WLA+ S D I I+ + +K +GH
Sbjct: 447 IKYISEPHMHSMPSISVHPNGNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 499
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +1
Query: 580 KTLKGHSNYVFCC--NFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHS 726
K GH + C NF+P ++SG + WD ++ K + L H+
Sbjct: 494 KRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHN 544
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWD 684
R ++S + W+ S K +TLK H+ ++P + + + + +D ++ WD
Sbjct: 515 RFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWDGLIKYWD 573
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSS-GKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVR 690
+ ++S DKT++VW+ + G L+T GHS+ V +F+P + +LI S D +R W +
Sbjct: 708 LATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSIN 767
Query: 691 TGKCLK 708
G C +
Sbjct: 768 NGSCTR 773
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV- 687
+++ SA DK +W + K TL+ H+ + F+P + + SFD++VR+WD
Sbjct: 664 KMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRVWDAD 723
Query: 688 RTGKCLKPLPAHSDPVSAVHFN 753
G L+ HS V+++ F+
Sbjct: 724 NKGYSLRTFMGHSSMVTSLDFH 745
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Frame = +2
Query: 284 HSQTSLQWRTNYTL-KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEK 457
H + ++ W T+ K TL HT ++ ++FSP+ LA+SS DK +++W A + G +
Sbjct: 671 HDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRVWDADNKGYSLR 730
Query: 458 TISGHKMGISDV 493
T GH ++ +
Sbjct: 731 TFMGHSSMVTSL 742
Score = 44.4 bits (100), Expect = 8e-05
Identities = 21/77 (27%), Positives = 38/77 (49%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
LI S +D ++ W +++G C + KG S + F P+ ++ S V + DV T
Sbjct: 751 LICSCDNDNEIRYWSINNGSCTRVYKGGSTQI---RFQPRVGKYLAASSANLVNVLDVET 807
Query: 694 GKCLKPLPAHSDPVSAV 744
L H++P+++V
Sbjct: 808 QAIRHSLQGHANPINSV 824
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Frame = +1
Query: 517 IVSASDDKTLKVWEL---SSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWD 684
+ S S+D +KVW L S G+C+ L + N C F+P +L+V G + +S+ +W+
Sbjct: 833 LASVSEDM-VKVWTLGTGSEGECVHELSCNGNKFQSCVFHPAYPSLLVIGCY-QSLELWN 890
Query: 685 VRTGKCLKPLPAHSDPVSAV 744
+ K + LPAH ++++
Sbjct: 891 MSENKTM-TLPAHEGLITSL 909
Score = 35.9 bits (79), Expect = 0.029
Identities = 14/36 (38%), Positives = 26/36 (72%)
Frame = +2
Query: 323 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
++ +L GH ++SV + P+G++LAS S D ++K+W
Sbjct: 810 IRHSLQGHANPINSVCWDPSGDFLASVSED-MVKVW 844
Score = 31.5 bits (68), Expect = 0.63
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 305 WRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
W + TL H ++S+ S +AS+S DKL+K+W
Sbjct: 889 WNMSENKTMTLPAHEGLITSLAVSTATGLVASASHDKLVKLW 930
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 359 SSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW 499
+ ++F P G++LA+SSA+ L+ + ++ GH I+ V W
Sbjct: 780 TQIRFQPRVGKYLAASSAN-LVNVLDVETQAIRHSLQGHANPINSVCW 826
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
+L+ D + + SGK + L+GH +Y F ++P ++ +G+ D + R+WDVR
Sbjct: 290 KLVAVLGDSPECLLADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVR 349
Query: 691 T-GKCLKPLPAHSDPVSAVHFNRD 759
+ LK L + + A+ F D
Sbjct: 350 NLSQSLKVLKGNMGAIRALRFTSD 373
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAWSSD 508
L GH S + PNG+ LA+ + D ++W + + K + G+ I + ++SD
Sbjct: 315 LEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRALRFTSD 373
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/83 (32%), Positives = 50/83 (60%), Gaps = 6/83 (7%)
Frame = +1
Query: 517 IVSASDDKTLKVWEL-----SSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRI 678
+ S S D+T ++W + S K L+ LKGH++ V ++P+ S+L+ + S D+SVR+
Sbjct: 35 LASGSVDQTARIWNIEPHGHSKAKDLE-LKGHTDSVDQLCWDPKHSDLVATASGDKSVRL 93
Query: 679 WDVRTGKCLKPLPAHSDPVSAVH 747
WD R+GKC + + + ++ +
Sbjct: 94 WDARSGKCTQQVELSGENINITY 116
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/71 (30%), Positives = 32/71 (45%)
Frame = +1
Query: 541 TLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPA 720
T++V S K L TL H+ +C +P+ GS D V +WD+ CL+
Sbjct: 172 TVEVLSYPSLKPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTK 231
Query: 721 HSDPVSAVHFN 753
PV + FN
Sbjct: 232 LEWPVRTISFN 242
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/64 (31%), Positives = 35/64 (54%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
L+ +AS DK++++W+ SGKC + ++ S + P + G+ D+ + I DVR
Sbjct: 81 LVATASGDKSVRLWDARSGKCTQQVE-LSGENINITYKPDGTHVAVGNRDDELTILDVRK 139
Query: 694 GKCL 705
K L
Sbjct: 140 FKPL 143
Score = 36.7 bits (81), Expect = 0.017
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +2
Query: 290 QTSLQWRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT--- 460
+T++ +++ ++ ++ GH K V SV ++ NG LAS S D+ +IW K
Sbjct: 3 ETTIPFKSLHSREYQ--GHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDL 60
Query: 461 -ISGHKMGISDVAW 499
+ GH + + W
Sbjct: 61 ELKGHTDSVDQLCW 74
Score = 36.7 bits (81), Expect = 0.017
Identities = 22/81 (27%), Positives = 39/81 (48%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
R S D + +W++S CL+T V +FN I S S D + I +V+
Sbjct: 204 RYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISFNYSGEYIASASEDLFIDIANVQ 263
Query: 691 TGKCLKPLPAHSDPVSAVHFN 753
TG+ + +P + +++V +N
Sbjct: 264 TGRTVHQIPCRA-AMNSVEWN 283
Score = 33.1 bits (72), Expect = 0.21
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD 442
TL HT + P G + A SAD L+ +W D
Sbjct: 186 TLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISD 222
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 589 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
+GH V +N + SGS D++ RIW++
Sbjct: 17 QGHKKKVHSVAWNSNGTKLASGSVDQTARIWNI 49
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +2
Query: 314 NYTLKFTLAG-HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMG-IS 487
N LK ++ G H + ++SPNGEW+AS ++IWGAY+ K G I
Sbjct: 44 NNPLKVSIYGEHAYPATVARYSPNGEWIASGDVSGTVRIWGAYNDHVLKNEFKVLAGRID 103
Query: 488 DVAWSSD 508
D+ WS+D
Sbjct: 104 DLQWSAD 110
Score = 34.7 bits (76), Expect = 0.068
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
IV+ +D + +E K + + HSN+V C F P + ++ S D+ I+D +T
Sbjct: 160 IVTCGEDFLVNFYEGPPFKFKLSSREHSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTC 219
Query: 697 KCLKPLPA---HSDPVSAVHFNRD 759
+ L L + H + AV ++ D
Sbjct: 220 EILGELSSDDGHKGSIYAVSWSPD 243
Score = 34.7 bits (76), Expect = 0.068
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD---GKFEKTIS--GHKMGISDV 493
GH ++ +V +SP+G+ + + SADK KIW D G T++ G G+ D+
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWDISDNGSGSLNTTLNCPGSSGGVDDM 285
Score = 33.1 bits (72), Expect = 0.21
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Frame = +2
Query: 317 YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI------SGHKM 478
+ K + H+ V+ V+F+P+G + S+DK I YDGK + + GHK
Sbjct: 177 FKFKLSSREHSNFVNCVRFAPDGSKFITVSSDKKGII---YDGKTCEILGELSSDDGHKG 233
Query: 479 GISDVAWSSD 508
I V+WS D
Sbjct: 234 SIYAVSWSPD 243
Score = 31.5 bits (68), Expect = 0.63
Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +1
Query: 520 VSASDDKTLKVWELSSGKCLKTLK---GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
++ S DK +++ + + L L GH ++ +++P +++ S D+S +IWD+
Sbjct: 203 ITVSSDKKGIIYDGKTCEILGELSSDDGHKGSIYAVSWSPDGKQVLTVSADKSAKIWDI 261
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 320 TLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKMGISDVA 496
T + L H A+S +++SP+ AS+ ++ +W + + K + H I+ +A
Sbjct: 482 TEEAVLERHRGAISVIRYSPDLSMFASADLNREAVVWDRVSREMKLKNMLYHSARINCLA 541
Query: 497 WSSDA 511
WS ++
Sbjct: 542 WSPNS 546
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 49.2 bits (112), Expect = 3e-06
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWEL--SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 684
+L+ +AS D T +W+ S +C+ TL+GH N V ++N + + + S D+SV IW+
Sbjct: 87 QLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWE 146
Query: 685 VRTGK---CLKPLPAHSDPVSAVHFN 753
V G C L H+ V V ++
Sbjct: 147 VLEGNEYDCAAVLTGHTQDVKMVQWH 172
Score = 48.8 bits (111), Expect = 4e-06
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +2
Query: 287 SQTSLQWRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE--KT 460
S S W L+ T HT+ V S +SP+G+ LA++S D IW Y +FE T
Sbjct: 57 SSLSRSWTCKTVLEET---HTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECIST 113
Query: 461 ISGHKMGISDVAWSSDAG*LS 523
+ GH+ + V+W++ L+
Sbjct: 114 LEGHENEVKSVSWNASGSCLA 134
Score = 45.2 bits (102), Expect = 5e-05
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSS----GKCLKTLKG-HSNYVFCCNFNPQSNLIVSGSFDESVRI 678
++ S S D T+++WE SS C L+ H+ V C ++P L+ + SFD + I
Sbjct: 41 ILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGI 100
Query: 679 WDVRTG--KCLKPLPAHSDPVSAVHFN 753
W +C+ L H + V +V +N
Sbjct: 101 WKNYGSEFECISTLEGHENEVKSVSWN 127
Score = 41.1 bits (92), Expect = 8e-04
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 11/90 (12%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGK---CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW-- 681
+ + S DK++ +WE+ G C L GH+ V ++P +++ S S+D ++++W
Sbjct: 133 LATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWS 192
Query: 682 --DVRTGKCLKPL----PAHSDPVSAVHFN 753
D +C++ L HS V ++ FN
Sbjct: 193 EDDDGEYQCVQTLGESNNGHSSTVWSISFN 222
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Frame = +2
Query: 305 WRTNYTLKF----TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK---FEKTI 463
W+ NY +F TL GH V SV ++ +G LA+ S DK + IW +G +
Sbjct: 101 WK-NYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVL 159
Query: 464 SGHKMGISDVAW 499
+GH + V W
Sbjct: 160 TGHTQDVKMVQW 171
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +2
Query: 317 YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY--DGKFE--KTISGHKMGI 484
Y L GHT+ V V++ P + L S S D IK+W + DG+++ +T+ G
Sbjct: 153 YDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGH 212
Query: 485 SDVAWS 502
S WS
Sbjct: 213 SSTVWS 218
Score = 37.1 bits (82), Expect = 0.013
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
Frame = +1
Query: 514 LIVSASDDKTLKVW--ELSSGK--CLKTL----KGHSNYVFCCNFNPQSNLIVSGSFDES 669
++ S S D T+KVW E G+ C++TL GHS+ V+ +FN + +V+ S D +
Sbjct: 177 VLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLT 236
Query: 670 VRIWDVRTGK 699
++IW K
Sbjct: 237 LKIWGTDIAK 246
Score = 31.5 bits (68), Expect = 0.63
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE 454
GH+ V S+ F+ G+ + + S D +KIWG K +
Sbjct: 211 GHSSTVWSISFNAAGDKMVTCSDDLTLKIWGTDIAKMQ 248
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +2
Query: 314 NYTLKFTLAGHTKAVSSVKFSPN--GEWLASSSADKLIKIW 430
N LK A H V+SV++SP LAS+S D ++KIW
Sbjct: 307 NLLLKKNKA-HENDVNSVQWSPGEGNRLLASASDDGMVKIW 346
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSS 567
RL+ SASDD +K+W+L++
Sbjct: 332 RLLASASDDGMVKIWQLAT 350
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 520 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
V+ +D +++++ +GK + KGH V C F P SGS D ++RIW
Sbjct: 244 VAGGEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYASGSEDGTIRIW 297
Score = 38.7 bits (86), Expect(2) = 3e-06
Identities = 16/55 (29%), Positives = 34/55 (61%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
SAS D + K+W+ +G L + + H + V C F+ + +++G F++ +R++D+
Sbjct: 78 SASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSQDTKYLITGGFEKILRVFDL 131
Score = 36.3 bits (80), Expect = 0.022
Identities = 23/81 (28%), Positives = 36/81 (44%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
++SAS D + +G + T +GH V+ + + S S D S ++WD TG
Sbjct: 34 LISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTG 93
Query: 697 KCLKPLPAHSDPVSAVHFNRD 759
L H V A F++D
Sbjct: 94 DVLHSF-EHKHIVRACAFSQD 113
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
GH V V+F+P GE AS S D I+IW
Sbjct: 268 GHHGPVHCVRFAPTGESYASGSEDGTIRIW 297
Score = 29.9 bits (64), Expect(2) = 3e-06
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 670 VRIWDVRTGKCLKPLPAHSDPVSAVHFNRD 759
VR+WDVR+GK ++ L S PV++ ++D
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQD 198
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/59 (35%), Positives = 26/59 (44%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
T GH AV S N AS+SAD K+W A G + HK + A+S D
Sbjct: 56 TFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSQD 113
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/60 (38%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTL-KGHSNYVFCCNFNPQSN--LIVSGSFDESVRIWD 684
L++S SDD + +W SS K L ++ GH+ +FC F P+++ L+VSG+ D VR+++
Sbjct: 64 LLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPETSDELVVSGAGDAEVRLFN 123
Score = 43.2 bits (97), Expect = 2e-04
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
I S SDD +WE +G+ +K L G + + C +P +++ + D +++IW
Sbjct: 636 IASGSDDGRWFIWEKQTGRLMKVLVGDESVLNCIQCHPFDSVVATSGIDNTIKIW 690
Score = 31.5 bits (68), Expect = 0.63
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 586 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL 705
L+GH V +N +L++SGS D + IW+ + K L
Sbjct: 46 LEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLL 85
Score = 31.1 bits (67), Expect = 0.84
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGI 484
L GH V+++ ++ NG L S S D I IW K +I +GH I
Sbjct: 46 LEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANI 96
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 48.4 bits (110), Expect = 5e-06
Identities = 23/62 (37%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = +1
Query: 508 RRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWD 684
R ++ SAS DK +KVW++++G C T++ H+ V +N + +++SGSFD++V + D
Sbjct: 246 RNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVLKD 305
Query: 685 VR 690
R
Sbjct: 306 GR 307
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 595 HSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFN 753
H+ V +N + N++ S S D+ V++WDV TG C + H+ V AV +N
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWN 285
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 344 HTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 502
HT++V + ++ LAS+SADK +K+W G + T+ H + VAW+
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWN 285
Score = 36.3 bits (80), Expect = 0.022
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGK--CLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWD 684
L+ + S D+T+K+W+LS+ + C+ T ++ +F F+P + L+ G +++WD
Sbjct: 384 LLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIAFSPDNPFLLAMGGVMGELKLWD 443
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +2
Query: 329 FTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIW 430
FT+ GH +A +SV ++ + LA+ S D+ +K+W
Sbjct: 363 FTINGHDEAATSVSYNISAPNLLATGSKDRTVKLW 397
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 583 TLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDV 687
T+ GH ++N + NL+ +GS D +V++WD+
Sbjct: 364 TINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDL 399
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 48.4 bits (110), Expect = 5e-06
Identities = 20/46 (43%), Positives = 30/46 (65%)
Frame = +1
Query: 550 VWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
+WE+++GK LK GH V C F+ +L+VSGS D S+R+W +
Sbjct: 104 LWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSL 149
Score = 35.9 bits (79), Expect = 0.029
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTL 588
+I+S+S+D+T KVW LS GK LK +
Sbjct: 189 VIISSSEDRTCKVWSLSRGKLLKNI 213
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 625 NPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRD 759
N + +V G + +W+V TGK LK H V+ + F+ D
Sbjct: 87 NNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGD 131
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +1
Query: 508 RRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWD 684
R +++S D T+K+W + ++T K H+ V+ +NP+ ++ S S D ++RIWD
Sbjct: 119 RDSFLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWD 178
Query: 685 VRTGKCLKPLPAHSDPVSAVHFNR 756
VR +PAH + + +N+
Sbjct: 179 VREPGSTMIIPAHDFEILSCDWNK 202
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVR 690
+ SAS D TL++W++ + H + C++N + ++ + S D++V++WDVR
Sbjct: 164 VFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDVR 223
Query: 691 TGKC-LKPLPAHSDPVSAVHFN 753
+ + L L H V V F+
Sbjct: 224 SYRVPLAVLNGHGYAVRKVKFS 245
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKC-LKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWD 684
++ ++S DKT+KVW++ S + L L GH V F+P + +LI S S+D SV +WD
Sbjct: 207 ILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWD 265
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWL-ASSSADKLIKIW 430
L GH AV VKFSP+ L AS S D + +W
Sbjct: 232 LNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLW 264
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 48.0 bits (109), Expect = 7e-06
Identities = 23/79 (29%), Positives = 43/79 (54%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
+++ S S DKT+K+W+L++ +C+ TLK H+ V + ++S S D ++++W
Sbjct: 269 QMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTV--TSLLCWDKCLISSSLDGTIKVWAYS 326
Query: 691 TGKCLKPLPAHSDPVSAVH 747
LK + S+VH
Sbjct: 327 ENGILKVVQTRRQEQSSVH 345
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 544 LKVWELSSGKCL-KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPA 720
L W G + +L+GH+ + S+ + S S D ++R+WD +G+C+ +
Sbjct: 112 LHSWSCFPGLAMVASLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSINL 171
Query: 721 HSDPVSAV 744
++ S +
Sbjct: 172 DAEAGSLI 179
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTL 588
+ S S D TL+VW+ +SG+C+ ++
Sbjct: 146 LFSVSIDGTLRVWDCNSGQCVHSI 169
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 48.0 bits (109), Expect = 7e-06
Identities = 23/62 (37%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = +1
Query: 508 RRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWD 684
R ++ SAS DK +KVW++++G C T++ H+ V +N + +++SGSFD++V + D
Sbjct: 278 RNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVMKD 337
Query: 685 VR 690
R
Sbjct: 338 GR 339
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 595 HSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFN 753
H+ V +N + N++ S S D+ V++WDV TG C + H+ V AV +N
Sbjct: 264 HTESVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWN 317
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 326 KFTLAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 502
KF HT++V + ++ LAS+SADK +K+W G + T+ H + VAW+
Sbjct: 258 KFKEGSHTESVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWN 317
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGK--CLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWD 684
L+ + S DK++K+W+LS+ + C+ T + ++ VF +F + L+ G + +WD
Sbjct: 419 LLATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSISFAVDNPFLLAIGGSKGELHVWD 478
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +1
Query: 637 NLIVSGSFDESVRIWDVRTGK--CLKPLPAHSDPVSAVHFNRD 759
NL+ +GS D+SV++WD+ + C+ ++ V ++ F D
Sbjct: 418 NLLATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSISFAVD 460
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 520 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
V+ +D ++V++ +G+ + KGH V C F P SGS D ++RIW
Sbjct: 244 VAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
Score = 37.5 bits (83), Expect(2) = 7e-06
Identities = 16/55 (29%), Positives = 34/55 (61%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
SAS D + K+W+ +G L + + H + V C F+ + +++G F++ +R++D+
Sbjct: 78 SASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSEDTKSLLTGGFEKILRVFDM 131
Score = 35.5 bits (78), Expect = 0.039
Identities = 23/81 (28%), Positives = 35/81 (43%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
++SAS D + +G + T +GH V+ + + S S D S ++WD TG
Sbjct: 34 LISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTG 93
Query: 697 KCLKPLPAHSDPVSAVHFNRD 759
L H V A F+ D
Sbjct: 94 DVLHSF-EHKHIVRACAFSED 113
Score = 32.7 bits (71), Expect = 0.27
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 520 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRTG 696
++ +D T+K W+ + +K+ N + + P+S V+G D VR++D TG
Sbjct: 202 ITTADGSTVKFWDANHFGLVKSYDMPCN-IESASLEPKSGEKFVAGGEDMWVRVFDFYTG 260
Query: 697 KCLKPLPAHSDPVSAVHF 750
+ + H PV V F
Sbjct: 261 EEIGCNKGHHGPVHCVRF 278
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
GH V V+F+P G AS S D I+IW
Sbjct: 268 GHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
Score = 29.9 bits (64), Expect(2) = 7e-06
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 670 VRIWDVRTGKCLKPLPAHSDPVSAVHFNRD 759
VR+WDVR+GK ++ L S PV++ ++D
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQD 198
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/59 (35%), Positives = 26/59 (44%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
T GH AV S N AS+SAD K+W A G + HK + A+S D
Sbjct: 56 TFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSED 113
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 520 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
V+ +D ++V++ +G+ + KGH V C F P SGS D ++RIW
Sbjct: 244 VAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
Score = 37.5 bits (83), Expect(2) = 7e-06
Identities = 16/55 (29%), Positives = 34/55 (61%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
SAS D + K+W+ +G L + + H + V C F+ + +++G F++ +R++D+
Sbjct: 78 SASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSEDTKSLLTGGFEKILRVFDM 131
Score = 35.5 bits (78), Expect = 0.039
Identities = 23/81 (28%), Positives = 35/81 (43%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
++SAS D + +G + T +GH V+ + + S S D S ++WD TG
Sbjct: 34 LISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTG 93
Query: 697 KCLKPLPAHSDPVSAVHFNRD 759
L H V A F+ D
Sbjct: 94 DVLHSF-EHKHIVRACAFSED 113
Score = 32.7 bits (71), Expect = 0.27
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 520 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRTG 696
++ +D T+K W+ + +K+ N + + P+S V+G D VR++D TG
Sbjct: 202 ITTADGSTVKFWDANHFGLVKSYDMPCN-IESASLEPKSGEKFVAGGEDMWVRVFDFYTG 260
Query: 697 KCLKPLPAHSDPVSAVHF 750
+ + H PV V F
Sbjct: 261 EEIGCNKGHHGPVHCVRF 278
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
GH V V+F+P G AS S D I+IW
Sbjct: 268 GHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
Score = 29.9 bits (64), Expect(2) = 7e-06
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 670 VRIWDVRTGKCLKPLPAHSDPVSAVHFNRD 759
VR+WDVR+GK ++ L S PV++ ++D
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQD 198
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/59 (35%), Positives = 26/59 (44%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
T GH AV S N AS+SAD K+W A G + HK + A+S D
Sbjct: 56 TFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSED 113
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 47.6 bits (108), Expect = 9e-06
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
+L+ DD + + S+G+ + TLKGH +Y F ++P +G+ D++ RIWD R
Sbjct: 290 KLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTR 349
Query: 691 -TGKCLKPLPAHSDPVSAVHFNRD 759
+ + L + V ++ F D
Sbjct: 350 KLSESVAVLKGNLGAVRSIRFTSD 373
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAWSSD 508
TL GH + + PNG A+ + DK +IW + + G+ + + ++SD
Sbjct: 314 TLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSD 373
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 47.6 bits (108), Expect = 9e-06
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
+L+ DD + + S+G+ + TLKGH +Y F ++P +G+ D++ RIWD R
Sbjct: 284 KLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTR 343
Query: 691 -TGKCLKPLPAHSDPVSAVHFNRD 759
+ + L + V ++ F D
Sbjct: 344 KLSESVAVLKGNLGAVRSIRFTSD 367
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAWSSD 508
TL GH + + PNG A+ + DK +IW + + G+ + + ++SD
Sbjct: 308 TLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSD 367
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 47.6 bits (108), Expect = 9e-06
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +1
Query: 508 RRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWD 684
R ++ S S+DK +KVW++++GKC T++ H V +N + +++SGS D +V + D
Sbjct: 227 RNIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVLKD 286
Query: 685 VR 690
R
Sbjct: 287 GR 288
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Frame = +1
Query: 535 DKTLKVWELSSGK----CLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGK 699
+ ++++W+L C++ + +F FN ++ N++ SGS D+ V++WDV TGK
Sbjct: 189 ESSIEIWDLDLVNEVLPCVQLGRIAGQTLFFLTFNWENRNIVASGSEDKKVKVWDVATGK 248
Query: 700 CLKPLPAHSDPVSAVHFN 753
C + H V AV +N
Sbjct: 249 CKVTMEHHEKKVHAVAWN 266
Score = 35.9 bits (79), Expect = 0.029
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 380 NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS 505
N +AS S DK +K+W GK + T+ H+ + VAW++
Sbjct: 226 NRNIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNN 267
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +1
Query: 586 LKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDV 687
+ H + V ++N + NL+ +GS DESV++WD+
Sbjct: 341 IHAHDSEVSSISYNIHAPNLLATGSADESVKLWDL 375
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 660
L+ + S D+++K+W+LS+ + N V N N ++ VSG F
Sbjct: 360 LLATGSADESVKLWDLSNNQPSWIATNKPNAVRAMNKNFCCHMFVSGFF 408
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 47.6 bits (108), Expect = 9e-06
Identities = 27/76 (35%), Positives = 43/76 (56%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
+VS S D + VW L +G+ ++TLKGH V + + IVS S D++++ W R G
Sbjct: 86 LVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAIDNED--IVSSSVDQTLKRW--RNG 141
Query: 697 KCLKPLPAHSDPVSAV 744
+ ++ AH P+ AV
Sbjct: 142 QLVESWDAHQSPIQAV 157
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/65 (36%), Positives = 40/65 (61%)
Frame = +1
Query: 520 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 699
+SAS D ++++W LS G+ L + GH++ V+ + + S LIVS S D +IW + G
Sbjct: 205 LSASHDGSIRLWALS-GEVLLEMVGHTSLVYSVDAH-SSGLIVSASEDRHAKIW--KDGV 260
Query: 700 CLKPL 714
C++ L
Sbjct: 261 CVQSL 265
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/81 (33%), Positives = 44/81 (54%)
Frame = +1
Query: 493 GMVL*RRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 672
G+ + IVS+S D+TLK W +G+ +++ H + + P L VSGS D S+
Sbjct: 118 GVAIDNEDIVSSSVDQTLKRWR--NGQLVESWDAHQSPIQAVIRLPSGEL-VSGSSDASL 174
Query: 673 RIWDVRTGKCLKPLPAHSDPV 735
++W +T L+ L H+D V
Sbjct: 175 KLWKGKTS--LQTLSGHTDTV 193
Score = 39.9 bits (89), Expect = 0.002
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Frame = +2
Query: 308 RTNYTLKFTLAGHTKAVSSVKF-SPNGEW----LASSSADKLIKIWGAYDGKFEKTISGH 472
+ YT + L GHT V + + P E+ L S S D + +W +G+ +T+ GH
Sbjct: 53 KRKYTSEKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGH 112
Query: 473 KMGISDVAW-SSDAG*LSVLVTIKL*KFGNLVQ 568
+M ++ VA + D SV T+K + G LV+
Sbjct: 113 QMQVTGVAIDNEDIVSSSVDQTLKRWRNGQLVE 145
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Frame = +1
Query: 517 IVSASDDKTLKVWELS-SGK----CLKTLKGHSNYVFCCNFNPQSN-----LIVSGSFDE 666
I ++S D+T++VW L S K K L GH+++V + P ++ +VSGS D
Sbjct: 34 IATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDT 93
Query: 667 SVRIWDVRTGKCLKPLPAHSDPVSAVHFNRD 759
V +W++ G+ ++ L H V+ V + +
Sbjct: 94 FVFVWNLMNGENIQTLKGHQMQVTGVAIDNE 124
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/59 (35%), Positives = 36/59 (61%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
LIVSAS+D+ K+W+ G C+++L+ H ++ F +++ + S D VR+W VR
Sbjct: 243 LIVSASEDRHAKIWK--DGVCVQSLE-HPGCIWDAKFLETGDIVTACS-DGVVRVWTVR 297
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 47.6 bits (108), Expect = 9e-06
Identities = 27/76 (35%), Positives = 43/76 (56%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
+VS S D + VW L +G+ ++TLKGH V + + IVS S D++++ W R G
Sbjct: 86 LVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAIDNED--IVSSSVDQTLKRW--RNG 141
Query: 697 KCLKPLPAHSDPVSAV 744
+ ++ AH P+ AV
Sbjct: 142 QLVESWDAHQSPIQAV 157
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/65 (36%), Positives = 40/65 (61%)
Frame = +1
Query: 520 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 699
+SAS D ++++W LS G+ L + GH++ V+ + + S LIVS S D +IW + G
Sbjct: 205 LSASHDGSIRLWALS-GEVLLEMVGHTSLVYSVDAH-SSGLIVSASEDRHAKIW--KDGV 260
Query: 700 CLKPL 714
C++ L
Sbjct: 261 CVQSL 265
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/81 (33%), Positives = 44/81 (54%)
Frame = +1
Query: 493 GMVL*RRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 672
G+ + IVS+S D+TLK W +G+ +++ H + + P L VSGS D S+
Sbjct: 118 GVAIDNEDIVSSSVDQTLKRWR--NGQLVESWDAHQSPIQAVIRLPSGEL-VSGSSDASL 174
Query: 673 RIWDVRTGKCLKPLPAHSDPV 735
++W +T L+ L H+D V
Sbjct: 175 KLWKGKTS--LQTLSGHTDTV 193
Score = 39.9 bits (89), Expect = 0.002
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Frame = +2
Query: 308 RTNYTLKFTLAGHTKAVSSVKF-SPNGEW----LASSSADKLIKIWGAYDGKFEKTISGH 472
+ YT + L GHT V + + P E+ L S S D + +W +G+ +T+ GH
Sbjct: 53 KRKYTSEKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGH 112
Query: 473 KMGISDVAW-SSDAG*LSVLVTIKL*KFGNLVQ 568
+M ++ VA + D SV T+K + G LV+
Sbjct: 113 QMQVTGVAIDNEDIVSSSVDQTLKRWRNGQLVE 145
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Frame = +1
Query: 517 IVSASDDKTLKVWELS-SGK----CLKTLKGHSNYVFCCNFNPQSN-----LIVSGSFDE 666
I ++S D+T++VW L S K K L GH+++V + P ++ +VSGS D
Sbjct: 34 IATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDT 93
Query: 667 SVRIWDVRTGKCLKPLPAHSDPVSAVHFNRD 759
V +W++ G+ ++ L H V+ V + +
Sbjct: 94 FVFVWNLMNGENIQTLKGHQMQVTGVAIDNE 124
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/59 (35%), Positives = 36/59 (61%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
LIVSAS+D+ K+W+ G C+++L+ H ++ F +++ + S D VR+W VR
Sbjct: 243 LIVSASEDRHAKIWK--DGVCVQSLE-HPGCIWDAKFLETGDIVTACS-DGVVRVWTVR 297
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 47.6 bits (108), Expect = 9e-06
Identities = 22/56 (39%), Positives = 36/56 (64%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
L+ S S DKTLKVW LS KCL++++ H + V + +L+ +GS D ++++W
Sbjct: 259 LLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTV-VSGFDDLVFTGSADGTLKVW 313
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/50 (36%), Positives = 31/50 (62%)
Frame = +1
Query: 595 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAV 744
H + V C + N L+ SGS+D+++++W + KCL+ + AH D V+ V
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTV 293
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +2
Query: 344 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
H AVS + + + L S S DK +K+W D K ++I H ++ V D
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVVSGFD 298
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 6/63 (9%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELS-SGKCLK-----TLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 675
L+ + S D TLKVW+ GK +K L N V N ++ GS D +V
Sbjct: 300 LVFTGSADGTLKVWKREVQGKEMKHVLVQVLMKQENAVTALAVNLTDAVVYCGSSDGTVN 359
Query: 676 IWD 684
W+
Sbjct: 360 FWE 362
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 47.2 bits (107), Expect = 1e-05
Identities = 17/50 (34%), Positives = 32/50 (64%)
Frame = +1
Query: 595 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAV 744
H + V C + N + L+ SGS+D+++++W + KCL+ + AH D ++ V
Sbjct: 248 HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTV 297
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYV--FCCNFNPQSNLIVSGSFDESVRIW 681
L+ S S DKTLKVW LS KCL++++ H + + F+ +L+ +GS D ++++W
Sbjct: 263 LLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFD---DLLFTGSADGTLKVW 317
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +2
Query: 344 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
H AVS + + L S S DK +K+W D K ++I H I+ VA D
Sbjct: 248 HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFD 302
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 14/72 (19%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELS---SGKCLKTLKGHSNYVFCCNF-----------NPQSNLIVS 651
L++S DK + VW + S CL L H V C Q ++ S
Sbjct: 393 LVLSGGADKNICVWRRNGDGSHSCLSVLMDHVGPVKCLTAVEDDGEGHREKGDQKWIVYS 452
Query: 652 GSFDESVRIWDV 687
GS D+SV++W V
Sbjct: 453 GSLDKSVKVWRV 464
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIW 681
++SAS D ++++W++ CL + H+NYV FNP + +SGS D VRIW
Sbjct: 370 LLSASVDNSVRLWQIGCEDCL-GIFSHNNYVTSVQFNPVDDDHFISGSIDGKVRIW 424
Score = 36.7 bits (81), Expect = 0.017
Identities = 20/61 (32%), Positives = 36/61 (59%)
Frame = +1
Query: 571 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHF 750
K L GHS + +++ ++N ++S S D SVR+W + CL + +H++ V++V F
Sbjct: 347 KPLHEFLGHSGDILDISWS-KNNRLLSASVDNSVRLWQIGCEDCL-GIFSHNNYVTSVQF 404
Query: 751 N 753
N
Sbjct: 405 N 405
Score = 36.3 bits (80), Expect = 0.022
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD 442
+ H A+ ++KFSP+G +LAS+ D ++++W +
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVE 282
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIW 681
++SAS D ++++W++ CL + H+NYV FNP + +SGS D VRIW
Sbjct: 370 LLSASVDNSVRLWQIGCEDCL-GIFSHNNYVTSVQFNPVDDDHFISGSIDGKVRIW 424
Score = 36.7 bits (81), Expect = 0.017
Identities = 20/61 (32%), Positives = 36/61 (59%)
Frame = +1
Query: 571 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHF 750
K L GHS + +++ ++N ++S S D SVR+W + CL + +H++ V++V F
Sbjct: 347 KPLHEFLGHSGDILDISWS-KNNRLLSASVDNSVRLWQIGCEDCL-GIFSHNNYVTSVQF 404
Query: 751 N 753
N
Sbjct: 405 N 405
Score = 36.3 bits (80), Expect = 0.022
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD 442
+ H A+ ++KFSP+G +LAS+ D ++++W +
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVE 282
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIW 681
I S S+D + +W S+GK + L GH+ V C +++P + +++ S S D ++RIW
Sbjct: 504 IASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIW 559
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG-AYDG--KFEKTISGHKMGISDVAWSS 505
L HT V ++FS NG++LASSS D+ IW + DG + T+ GH + + WS
Sbjct: 270 LESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSP 329
Query: 506 D 508
D
Sbjct: 330 D 330
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLK---TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
+ + S+S D+T +WE+S+ + TL GH V ++P +++ +E +R W
Sbjct: 287 KYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRW 346
Query: 682 DVRTGKCL 705
DV +G C+
Sbjct: 347 DVDSGDCV 354
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +1
Query: 535 DKTLKVWELSSG-KCLKTLKGHSNYVFC---CNFNPQSNLIVSGSFDESVRIWDVRTGKC 702
++ +++W + K + KGH F C + I SGS D V IW TGK
Sbjct: 464 NQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGKL 523
Query: 703 LKPLPAHSDPVSAVHFN 753
+ LP H+ V+ V ++
Sbjct: 524 IVELPGHAGAVNCVSWS 540
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV- 687
R +++ ++ ++ W++ SG C+ + C + P I++G D S+ +WD+
Sbjct: 332 RQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPDGQGIIAGMTDRSICMWDLD 391
Query: 688 -RTGKCLK 708
R +C K
Sbjct: 392 GREKECWK 399
Score = 36.3 bits (80), Expect = 0.022
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 287 SQTSLQWRTNYTLKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWG 433
SQ + R+ L L GH AV+ V +SP N LAS+S D I+IWG
Sbjct: 511 SQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWG 560
Score = 34.3 bits (75), Expect = 0.090
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2
Query: 290 QTSLQWRTN----YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 445
QT++ W + +LK TL GH K V ++ +SP+ + + A+++I+ W G
Sbjct: 296 QTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSG 351
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 389 WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 502
++AS S D + IW GK + GH ++ V+WS
Sbjct: 503 FIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWS 540
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Frame = +1
Query: 520 VSASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
+S S D T ++W+ ++ + ++T GH V F P +GS D + R++D+RTG
Sbjct: 221 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTG 280
Query: 697 KCLKPLPAHSD----PVSAVHFN 753
L+ H D PV+++ F+
Sbjct: 281 HQLQVYQPHGDGENGPVTSIAFS 303
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 699
SA+ +T + + C +TL+GH+ V+ ++ P+ N IVS S D + +W+ T +
Sbjct: 40 SAAQGRTRVSFGATDLVCCRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQ 98
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTL-------KGHSNYVFCCNFNPQS-NLIVSGSFDESV 672
++++S D+T +W++++G LKT GH+ V + + + N +SGS D +
Sbjct: 172 LITSSGDQTCILWDVTTG--LKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTA 229
Query: 673 RIWDVR-TGKCLKPLPAHSDPVSAVHFNRD 759
R+WD R + ++ H V+ V F D
Sbjct: 230 RLWDTRAASRAVRTFHGHEGDVNTVKFFPD 259
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 580 KTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVRTG 696
+ L GH YV CC + P + +++ S D++ +WDV TG
Sbjct: 150 RMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTG 189
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +1
Query: 508 RRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
R IVSAS D L VW + + +K +V C F+P + G D I+ +
Sbjct: 77 RNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSL 136
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA 436
TL GHT V S+ ++P + S+S D + +W A
Sbjct: 60 TLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNA 94
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Frame = +1
Query: 520 VSASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
+S S D T ++W+ ++ + ++T GH V F P +GS D + R++D+RTG
Sbjct: 159 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTG 218
Query: 697 KCLKPLPAHSD----PVSAVHFN 753
L+ H D PV+++ F+
Sbjct: 219 HQLQVYQPHGDGENGPVTSIAFS 241
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTL-------KGHSNYVFCCNFNPQS-NLIVSGSFDESV 672
++++S D+T +W++++G LKT GH+ V + + + N +SGS D +
Sbjct: 110 LITSSGDQTCILWDVTTG--LKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTA 167
Query: 673 RIWDVR-TGKCLKPLPAHSDPVSAVHFNRD 759
R+WD R + ++ H V+ V F D
Sbjct: 168 RLWDTRAASRAVRTFHGHEGDVNTVKFFPD 197
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 580 KTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVRTG 696
+ L GH YV CC + P + +++ S D++ +WDV TG
Sbjct: 88 RMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTG 127
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +1
Query: 508 RRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
R IVSAS D L VW + + +K +V C F+P + G D I+ +
Sbjct: 15 RNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSL 74
Score = 31.9 bits (69), Expect = 0.48
Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = +1
Query: 508 RRLIVSASDDKTLKVWELSSGKCLKTL----KGHSNYVFCCNFNPQSNLIVSGSFDESVR 675
R L + + T VW+ G+ + L H N + C + + + +GS+D +++
Sbjct: 245 RLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSNLK 304
Query: 676 IW 681
IW
Sbjct: 305 IW 306
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Frame = +1
Query: 520 VSASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
+S S D T ++W+ ++ + ++T GH V F P +GS D + R++D+RTG
Sbjct: 221 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTG 280
Query: 697 KCLKPLPAHSD----PVSAVHFN 753
L+ H D PV+++ F+
Sbjct: 281 HQLQVYQPHGDGENGPVTSIAFS 303
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 699
SA+ +T + + C +TL+GH+ V+ ++ P+ N IVS S D + +W+ T +
Sbjct: 40 SAAQGRTRVSFGATDLVCCRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQ 98
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTL-------KGHSNYVFCCNFNPQS-NLIVSGSFDESV 672
++++S D+T +W++++G LKT GH+ V + + + N +SGS D +
Sbjct: 172 LITSSGDQTCILWDVTTG--LKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTA 229
Query: 673 RIWDVR-TGKCLKPLPAHSDPVSAVHFNRD 759
R+WD R + ++ H V+ V F D
Sbjct: 230 RLWDTRAASRAVRTFHGHEGDVNTVKFFPD 259
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 580 KTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVRTG 696
+ L GH YV CC + P + +++ S D++ +WDV TG
Sbjct: 150 RMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTG 189
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +1
Query: 508 RRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
R IVSAS D L VW + + +K +V C F+P + G D I+ +
Sbjct: 77 RNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSL 136
Score = 31.9 bits (69), Expect = 0.48
Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = +1
Query: 508 RRLIVSASDDKTLKVWELSSGKCLKTL----KGHSNYVFCCNFNPQSNLIVSGSFDESVR 675
R L + + T VW+ G+ + L H N + C + + + +GS+D +++
Sbjct: 307 RLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSNLK 366
Query: 676 IW 681
IW
Sbjct: 367 IW 368
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA 436
TL GHT V S+ ++P + S+S D + +W A
Sbjct: 60 TLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNA 94
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/73 (34%), Positives = 38/73 (52%)
Frame = +1
Query: 463 IWPQNGDQ*CGMVL*RRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNL 642
+W ++ D + + +I S S DKTLKVW LS KCL+++K H + +
Sbjct: 169 LWIEHADSISCLAVHAGIIYSGSWDKTLKVWRLSDLKCLESIKAHDDAI--NGLVAGDGR 226
Query: 643 IVSGSFDESVRIW 681
+ S S D V+IW
Sbjct: 227 VYSASADGKVKIW 239
Score = 37.1 bits (82), Expect = 0.013
Identities = 14/50 (28%), Positives = 32/50 (64%)
Frame = +1
Query: 595 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAV 744
H++ + C + + +I SGS+D+++++W + KCL+ + AH D ++ +
Sbjct: 173 HADSISCLAVH--AGIIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGL 220
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV--FCCNFNPQSNLIVSGSFDESVRIWD 684
+ VSAS D T ++LSSG CL + S V F+P ++ +G+ V+IWD
Sbjct: 322 KYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWD 381
Query: 685 VRTGKCLKPLPAHSDPVSAVHFNRD 759
V++ + H+ V+A+ F+ +
Sbjct: 382 VKSQANVAKFDGHTGEVTAISFSEN 406
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
+I + D T +++ SG+ L TL GHS V F S+L+++ S D++VRIW
Sbjct: 236 VIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIW 291
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/33 (48%), Positives = 25/33 (75%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
TL GH+K V+SVKF + + + ++SADK ++IW
Sbjct: 259 TLTGHSKKVTSVKFVGDSDLVLTASADKTVRIW 291
Score = 33.1 bits (72), Expect = 0.21
Identities = 12/59 (20%), Positives = 33/59 (55%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
++ + + +K+W++ S + GH+ V +F+ ++ ++ + ++ VR+WD+R
Sbjct: 367 ILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFS-ENGYFLATAAEDGVRLWDLR 424
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV--FCCNFNPQSNLIVSGSFDESVRIWD 684
+ VSAS D T ++LSSG CL + S V F+P ++ +G+ V+IWD
Sbjct: 322 KYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWD 381
Query: 685 VRTGKCLKPLPAHSDPVSAVHFNRD 759
V++ + H+ V+A+ F+ +
Sbjct: 382 VKSQANVAKFDGHTGEVTAISFSEN 406
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
+I + D T +++ SG+ L TL GHS V F S+L+++ S D++VRIW
Sbjct: 236 VIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIW 291
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/33 (48%), Positives = 25/33 (75%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
TL GH+K V+SVKF + + + ++SADK ++IW
Sbjct: 259 TLTGHSKKVTSVKFVGDSDLVLTASADKTVRIW 291
Score = 33.1 bits (72), Expect = 0.21
Identities = 12/59 (20%), Positives = 33/59 (55%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
++ + + +K+W++ S + GH+ V +F+ ++ ++ + ++ VR+WD+R
Sbjct: 367 ILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFS-ENGYFLATAAEDGVRLWDLR 424
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 46.0 bits (104), Expect = 3e-05
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Frame = +1
Query: 496 MVL*RRLIVSASDDKTLKVWEL------SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 657
+V R L+ S +D L +W+L S K K+L H V ++P ++SGS
Sbjct: 13 LVCIRELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGS 72
Query: 658 FDESVRIWDVRTGKCLKPLPAHSDPVSAV 744
D S IWDV G + L AH V V
Sbjct: 73 VDNSCIIWDVNKGSVHQILDAHCHYVQGV 101
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +2
Query: 281 LH-SQTSLQWRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK 457
LH S+T+ W+ + +L F H K V +++SP+ +L S S D IW G +
Sbjct: 34 LHPSETNQSWKVHKSLSF----HRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQ 89
Query: 458 TISGHKMGISDVAW 499
+ H + VAW
Sbjct: 90 ILDAHCHYVQGVAW 103
Score = 34.3 bits (75), Expect = 0.090
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
++S S D + +W+++ G + L H +YV ++P + + S S D + RI+
Sbjct: 68 LISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 122
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 46.0 bits (104), Expect = 3e-05
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Frame = +1
Query: 514 LIVSASDDKTLKVWEL---SSGKCLKTLKGHSNYVFCCNFNPQSNLIV-SGSFDESVRIW 681
L S DD+ L +W+L S+ K ++++ HS V C FNP + +V +GS D++V+++
Sbjct: 242 LFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLF 301
Query: 682 DVR-TGKCLKPLPAHSDPVSAVHFN 753
D+R L +H + V V +N
Sbjct: 302 DLRKLSTALHTFDSHKEEVFQVGWN 326
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 323 LKFTLAGHTKAVSSVKFSPNGEWLASSSA-DKLIKIW 430
L F GHT +S ++P +W+ SS A D +++IW
Sbjct: 366 LLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIW 402
Score = 31.5 bits (68), Expect = 0.63
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAWS 502
++ H+ V+ + F+P EW +A+ S DK +K++ T HK + V W+
Sbjct: 268 SVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWN 326
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 46.0 bits (104), Expect = 3e-05
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWD--- 684
+ S SDD ++K+W ++ CL T++ +N V C F+PQ S+L+ GS D +D
Sbjct: 812 LASGSDDCSVKLWNINERNCLGTIRNIAN-VCCVQFSPQSSHLLAFGSSDFRTYCYDLRN 870
Query: 685 VRTGKCLKPLPAHSDPVSAVHF 750
+RT C+ L H+ VS F
Sbjct: 871 LRTPWCI--LSGHNKAVSYAKF 890
Score = 34.3 bits (75), Expect = 0.090
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
L+GH KAVS KF N E L ++S D +K+W
Sbjct: 878 LSGHNKAVSYAKFLDN-ETLVTASTDNTLKLW 908
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 616 CNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFN 753
C N N + S +D V++WDV TG+ + H +V F+
Sbjct: 760 CWNNYIRNYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFS 805
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
Frame = +1
Query: 517 IVSASDDKTLKVWE--------LSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 657
+V+AS D TLK+W+ LS+ C T GH+N + I GS
Sbjct: 896 LVTASTDNTLKLWDLKKTTHGGLSTNACSLTFGGHTNEKNFVGLSTSDGYIACGS 950
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/78 (24%), Positives = 40/78 (51%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
R + + D+ + +W++ + + ++ GH N V C F ++ + SGSFD +V++W+V
Sbjct: 235 RYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVE 294
Query: 691 TGKCLKPLPAHSDPVSAV 744
+ H + A+
Sbjct: 295 DKAFITENHGHQGEILAI 312
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 19/95 (20%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTL-------------------KGHSNYVFCCNFNPQSNLI 645
SAS D T+ W++SSGK K + K HS + +
Sbjct: 178 SASKDGTIMHWDVSSGKTDKYIWPSDEILKSHGMKLREPRNKNHSRESLALAVSSDGRYL 237
Query: 646 VSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHF 750
+G D V IWDVRT + ++ P H + VS + F
Sbjct: 238 ATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCF 272
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 475
GH VS + F L S S D+ +K+W D F GH+
Sbjct: 262 GHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKAFITENHGHQ 306
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/48 (22%), Positives = 24/48 (50%)
Frame = +2
Query: 344 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGIS 487
H++ ++ S +G +LA+ D+ + IW + + GH+ +S
Sbjct: 221 HSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVS 268
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 46.0 bits (104), Expect = 3e-05
Identities = 17/60 (28%), Positives = 34/60 (56%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
+L+ D + + SGK + +L+GH +Y F ++P ++ +G+ D + R+WD+R
Sbjct: 261 KLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGNQDTACRLWDIR 320
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/56 (35%), Positives = 36/56 (64%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
L+ SAS D+T+KVW + KC++++K H + V + +L+ +GS D +V++W
Sbjct: 149 LLYSASWDRTVKVWRIHDLKCIESIKAHDDAV--NSVTTAESLVFTGSADGTVKVW 202
Score = 44.4 bits (100), Expect = 8e-05
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +1
Query: 595 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAV 744
HS+ V C + L+ S S+D +V++W + KC++ + AH D V++V
Sbjct: 134 HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSV 183
Score = 32.7 bits (71), Expect = 0.27
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +2
Query: 344 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDV 493
H+ AVS + + + L S+S D+ +K+W +D K ++I H ++ V
Sbjct: 134 HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSV 183
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 14/73 (19%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGK---CLKTLKGHSNYVFCCNFNPQSN-----------LIV 648
+L+ S + DK + VW GK C+ L GH+ V C S ++
Sbjct: 277 KLLFSGAADKKICVWR-REGKVHTCVSVLTGHTGPVKCLAVVEPSGGEEEDGGDGRLVLY 335
Query: 649 SGSFDESVRIWDV 687
SGS D+SV++W V
Sbjct: 336 SGSLDKSVKVWRV 348
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +1
Query: 496 MVL*RRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESV 672
M + LI + +DD +++ +++SG TL GH + V ++ S ++ +G D ++
Sbjct: 156 MAMSHTLIAAGTDDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAI 215
Query: 673 RIWDVRTGKCLKPL 714
R WD+R C + L
Sbjct: 216 RFWDIRRAGCFRVL 229
Score = 34.7 bits (76), Expect = 0.068
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +2
Query: 305 WRTNYT---LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 475
W TN + + F + G + + + +A+ + D +++ G F T+SGH+
Sbjct: 131 WDTNTSQVVVDFKMPGKVYRTAMSSMAMSHTLIAAGTDDVQVRLCDIASGAFSHTLSGHR 190
Query: 476 MGISDVAWSSDA 511
G+ V WS+ +
Sbjct: 191 DGVMSVEWSTSS 202
Score = 31.5 bits (68), Expect = 0.63
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 538 KTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
KT+K + + SG+ L+GH V C FN + + D + +W
Sbjct: 379 KTVKGFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGADRQIIVW 426
Score = 31.1 bits (67), Expect = 0.84
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIW 430
TL+GH V SV++S + EW L + D I+ W
Sbjct: 185 TLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFW 218
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Frame = +1
Query: 559 LSSGKCLKTLK-----GHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGK 699
++ KC+ T++ GH + + P + + ++GSFD V++WD T +
Sbjct: 85 IAKHKCIFTVRKQHENGHKYAISSAIWYPIDTGMFITGSFDHYVKVWDTNTSQ 137
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +2
Query: 305 WRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI 484
W TL L GH ++V++ F+ N + L +S AD+ I +W G E ++ ++
Sbjct: 387 WSGRTTLM--LRGHYESVNTCCFNSNDQELYTSGADRQIIVWSP-GGSVEDEMAQGEVAE 443
Query: 485 SDVAWS 502
WS
Sbjct: 444 DKDNWS 449
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 45.6 bits (103), Expect = 4e-05
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Frame = +1
Query: 457 DNIWPQNGDQ*CGMVL*RRLIVSASDDKTLKVWELSSG--------KCLKTLKGHSNYVF 612
+N+ N Q G+ R++V+ ++D + VW +S + K L H+ V
Sbjct: 3325 ENLHESNQIQCAGVSHDGRIVVTGAEDGLVCVWRVSKDGPRGSRRLRLEKALCAHTAKVT 3384
Query: 613 CCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFN 753
C + +I SGS D +V IWD+ + ++ LP P+SA++ N
Sbjct: 3385 CLRVSQPYMMIASGSDDCTVIIWDLSSLSFVRQLPDFPVPISAIYIN 3431
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 44.8 bits (101), Expect = 6e-05
Identities = 24/71 (33%), Positives = 38/71 (53%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
+ S S DKT+KVW L + +C++TL HS+ V + ++S S D +V+IW G
Sbjct: 287 LYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVM--SLICWDQFLLSCSLDNTVKIWAAIEG 344
Query: 697 KCLKPLPAHSD 729
L+ H +
Sbjct: 345 GNLEVTYTHKE 355
Score = 35.1 bits (77), Expect = 0.051
Identities = 19/81 (23%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSG-KCLK---TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
L+ + + D ++ W ++ C + +L GH+ V +N + SGS D+++++W
Sbjct: 242 LLFAGTQDGSILAWRYNAATNCFEPSASLTGHTLAVVTLYVG--ANRLYSGSMDKTIKVW 299
Query: 682 DVRTGKCLKPLPAHSDPVSAV 744
+ +C++ L HS V ++
Sbjct: 300 SLDNLQCIQTLTDHSSVVMSL 320
Score = 34.7 bits (76), Expect = 0.068
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 544 LKVWELSSGKCLKT-LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 702
L W L T L GH V S+ + +GS DE++R+WD +G+C
Sbjct: 132 LHCWSKGESFALLTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQC 185
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLK 591
+ + S D+TL+VW+ +SG+C LK
Sbjct: 166 LYTGSKDETLRVWDCASGQCTGVLK 190
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +2
Query: 314 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 448
++ L L GH K VS + + L + S D+ +++W G+
Sbjct: 140 SFALLTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQ 184
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = +1
Query: 529 SDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLK 708
S ++L+ + + L+ KGH + V +P ++ +SGS D SVR+WD+R C
Sbjct: 91 STGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDLRVNACQG 150
Query: 709 PLPAHSDPVSA 741
L P A
Sbjct: 151 ILHLRGRPAVA 161
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 44.8 bits (101), Expect = 6e-05
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Frame = +1
Query: 457 DNIWPQNGDQ*CGMVL*RRLIVSASDDKTLKVWELSSG--------KCLKTLKGHSNYVF 612
+N+ N Q G+ R++V+ ++D + VW +S + K+L H+ V
Sbjct: 3269 ENLHEGNQIQCAGVSHDGRIVVTGAEDGLVSVWRVSKDGPRGSRRLRLEKSLCAHTAKVI 3328
Query: 613 CCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFN 753
C + +I S S D +V IWD+ + ++ LP S PV+ V+ N
Sbjct: 3329 CLRVSQPYMMIASSSDDCTVIIWDLSSLSFVRQLPNFSVPVTVVYIN 3375
Score = 32.7 bits (71), Expect = 0.27
Identities = 21/77 (27%), Positives = 36/77 (46%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
+I S+SDD T+ +W+LSS ++ L S V N + IV+ + + +W +
Sbjct: 3338 MIASSSDDCTVIIWDLSSLSFVRQLPNFSVPVTVVYINDLTGEIVTAA-GSVLAVWSI-N 3395
Query: 694 GKCLKPLPAHSDPVSAV 744
G CL + P +
Sbjct: 3396 GDCLSVVNTSQLPTDLI 3412
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 44.8 bits (101), Expect = 6e-05
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = +1
Query: 574 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLK 708
C KGH+ V + + I SGS D SVR+W+V TG+CLK
Sbjct: 415 CYLEYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLK 459
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 502
GHT AV+S+ +GEW+AS S D +++W G+ K + I VAW+
Sbjct: 421 GHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLK-VWQFDEAIMCVAWN 473
Score = 35.9 bits (79), Expect = 0.029
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 648
I S S D ++++WE+ +G+CLK + + C +NP S L V
Sbjct: 438 IASGSTDGSVRMWEVETGRCLKVWQ-FDEAIMCVAWNPLSRLPV 480
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +2
Query: 335 LAGHTK--AVSSVKFSPNGEWLASSSADKLIKIW 430
L GH+ V KF P WL ++ AD +IK++
Sbjct: 718 LRGHSSKGGVLDCKFHPRQPWLFTAGADSIIKLY 751
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 44.4 bits (100), Expect = 8e-05
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGK--CLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVR 690
S DD L +W+ +G +K K H + C ++NP +NLI++GS D +VR++D R
Sbjct: 299 SVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRVFDRR 357
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/58 (34%), Positives = 35/58 (60%)
Frame = +1
Query: 508 RRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
+RL+ S S DKT KVW +S +C++++ H + V + L+ +GS D +V++W
Sbjct: 223 KRLLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAV-VSGFDGLVFTGSADGTVKVW 279
Score = 44.0 bits (99), Expect = 1e-04
Identities = 30/87 (34%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
L+ S D T+ WE + K LKGH V C NL+ SGS D +R+W
Sbjct: 314 LVYCGSSDGTVNFWERENNMKNGGVLKGHKLAVLC--LVAAGNLMFSGSADLGIRVWRRP 371
Query: 691 TG----KCLKPLPAHSDPVSAVHFNRD 759
G CL L H+ PV + RD
Sbjct: 372 EGGGEHVCLSVLTGHAGPVKCLAVERD 398
Score = 41.1 bits (92), Expect = 8e-04
Identities = 16/50 (32%), Positives = 30/50 (60%)
Frame = +1
Query: 595 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAV 744
H + + C + L+ SGS+D++ ++W V +C++ + AH D V+AV
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAV 259
Score = 32.3 bits (70), Expect = 0.36
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 12/70 (17%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGK----CLKTLKGHSNYVFCCNFNPQSN--------LIVSGS 657
L+ S S D ++VW G CL L GH+ V C ++ SGS
Sbjct: 355 LMFSGSADLGIRVWRRPEGGGEHVCLSVLTGHAGPVKCLAVERDQESVSGERRWIVYSGS 414
Query: 658 FDESVRIWDV 687
D SV++W V
Sbjct: 415 LDRSVKMWRV 424
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +1
Query: 496 MVL*RRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV-SGSFDESV 672
M + LI + ++D +++ +++SG TL GH + V ++ S ++ +G D ++
Sbjct: 156 MAMSHTLIAAGTEDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAI 215
Query: 673 RIWDVRTGKCLKPL 714
R WD+R C + L
Sbjct: 216 RFWDIRRAGCFRVL 229
Score = 35.9 bits (79), Expect = 0.029
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLK--GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
L ++ S D LKVW+ ++ + + K G + LI +G+ D VR+ D+
Sbjct: 118 LFITGSFDHYLKVWDTNTAQAVVDFKMPGKVYRTAMSSMAMSHTLIAAGTEDVQVRLCDI 177
Query: 688 RTGKCLKPLPAHSDPVSAVHFN 753
+G L H D V +V ++
Sbjct: 178 ASGAFSHTLSGHRDGVMSVEWS 199
Score = 34.7 bits (76), Expect = 0.068
Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +2
Query: 305 WRTNYT---LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 475
W TN + F + G + + + +A+ + D +++ G F T+SGH+
Sbjct: 131 WDTNTAQAVVDFKMPGKVYRTAMSSMAMSHTLIAAGTEDVQVRLCDIASGAFSHTLSGHR 190
Query: 476 MGISDVAWSSDA 511
G+ V WS+ +
Sbjct: 191 DGVMSVEWSTSS 202
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 538 KTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
KT+K + + SG+ L+GH V C FN + + D + +W
Sbjct: 379 KTVKAFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGSDRQILVW 426
Score = 31.1 bits (67), Expect = 0.84
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIW 430
TL+GH V SV++S + EW L + D I+ W
Sbjct: 185 TLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFW 218
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Frame = +1
Query: 559 LSSGKCLKTL-----KGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKCL 705
++ KC+ T+ GH + + P + L ++GSFD +++WD T + +
Sbjct: 85 IAKHKCIFTVDKQHENGHKYAISSAIWYPIDTGLFITGSFDHYLKVWDTNTAQAV 139
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +2
Query: 305 WRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
W TL L GH ++V++ F+ N + L +S +D+ I +W
Sbjct: 387 WSGRTTLM--LRGHYESVNTCCFNSNDQELYTSGSDRQILVW 426
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/69 (31%), Positives = 32/69 (46%)
Frame = +1
Query: 535 DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPL 714
D +L++ L K L+ KGH + V + +SGS D +V +WD R KC L
Sbjct: 99 DDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRVEKCQGLL 158
Query: 715 PAHSDPVSA 741
P +A
Sbjct: 159 RVQGRPAAA 167
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTL--KGHSNYVFCCNFNPQSNLIVS-GSFDESVRIWDV 687
+V+ASDD ++++++++S CLKT+ K + + C +P + + S +D+S+R+ +
Sbjct: 48 MVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSL 107
Query: 688 RTGKCLKPLPAHSDPV 735
K L+ H D V
Sbjct: 108 HDNKYLRYFKGHHDRV 123
Score = 32.7 bits (71), Expect = 0.27
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 619 NFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHF 750
+F+ S +V+ S D+S+R++DV + CLK + + V V F
Sbjct: 40 DFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCF 83
Score = 32.3 bits (70), Expect = 0.36
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 622 FNPQSNLIVSGSFDESVRIWDVRTGK 699
F+P+ +VSGS D S W VR+GK
Sbjct: 258 FSPEGMFVVSGSGDGSTHAWGVRSGK 283
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/69 (31%), Positives = 32/69 (46%)
Frame = +1
Query: 535 DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPL 714
D +L++ L K L+ KGH + V + +SGS D +V +WD R KC L
Sbjct: 96 DDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRVEKCQGLL 155
Query: 715 PAHSDPVSA 741
P +A
Sbjct: 156 RVQGRPAAA 164
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/76 (28%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTL--KGHSNYVFCCNFNPQSNLIVS-GSFDESVRIWDV 687
+V+ASDD ++++++++S CLKT+ K + + C +P + + S +D+S+R+ +
Sbjct: 45 MVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSL 104
Query: 688 RTGKCLKPLPAHSDPV 735
K L+ H D V
Sbjct: 105 HDNKYLRYFKGHHDRV 120
Score = 32.7 bits (71), Expect = 0.27
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 619 NFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHF 750
+F+ S +V+ S D+S+R++DV + CLK + + V V F
Sbjct: 37 DFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCF 80
Score = 32.3 bits (70), Expect = 0.36
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 622 FNPQSNLIVSGSFDESVRIWDVRTGK 699
F+P+ +VSGS D S W VR+GK
Sbjct: 255 FSPEGMFVVSGSGDGSTHAWGVRSGK 280
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 43.6 bits (98), Expect = 1e-04
Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Frame = +1
Query: 514 LIVSASDDKTLKVWEL------SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 675
L+ S +D L +W+L S K K+L H V ++P ++SGS D S
Sbjct: 78 LLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCI 137
Query: 676 IWDVRTGKCLKPLPAHSDPVSAV 744
IWDV G + L AH V V
Sbjct: 138 IWDVNKGSVHQILDAHCHYVQGV 160
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +2
Query: 281 LH-SQTSLQWRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK 457
LH S+T+ W+ + +L F H K V +++SP+ +L S S D IW G +
Sbjct: 93 LHPSETNQSWKVHKSLSF----HRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQ 148
Query: 458 TISGHKMGISDVAW 499
+ H + VAW
Sbjct: 149 ILDAHCHYVQGVAW 162
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG------KFEKTISGHKMGISDV 493
+L H AV++++FSP+GE LAS + + IW + K K++S H+ + D+
Sbjct: 59 SLTYHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDL 118
Query: 494 AWSSD 508
WS D
Sbjct: 119 QWSPD 123
Score = 34.3 bits (75), Expect = 0.090
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
++S S D + +W+++ G + L H +YV ++P + + S S D + RI+
Sbjct: 127 LISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 181
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +1
Query: 607 VFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHS 726
V +F+P S L+ + D +++W + +G+ K +P+ S
Sbjct: 16 VLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVS 55
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 350 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI 463
K V +V F P LA++ AD IK+W G+ EK +
Sbjct: 14 KPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKV 51
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 9/79 (11%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLK---------TLKGHSNYVFCCNFNPQSNLIVSGSFDE 666
L+ +A D +K+W ++SG+ K +L H V F+P L+ SG+
Sbjct: 27 LLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSGELLASGADGG 86
Query: 667 SVRIWDVRTGKCLKPLPAH 723
+ IW + + + H
Sbjct: 87 ELFIWKLHPSETNQSWKVH 105
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 43.6 bits (98), Expect = 1e-04
Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Frame = +1
Query: 514 LIVSASDDKTLKVWEL------SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 675
L+ S +D L +W+L S K K+L H V ++P ++SGS D S
Sbjct: 78 LLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCI 137
Query: 676 IWDVRTGKCLKPLPAHSDPVSAV 744
IWDV G + L AH V V
Sbjct: 138 IWDVNKGSVHQILDAHCHYVQGV 160
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +2
Query: 281 LH-SQTSLQWRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK 457
LH S+T+ W+ + +L F H K V +++SP+ +L S S D IW G +
Sbjct: 93 LHPSETNQSWKVHKSLSF----HRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQ 148
Query: 458 TISGHKMGISDVAW 499
+ H + VAW
Sbjct: 149 ILDAHCHYVQGVAW 162
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG------KFEKTISGHKMGISDV 493
+L H AV++++FSP+GE LAS + + IW + K K++S H+ + D+
Sbjct: 59 SLTYHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDL 118
Query: 494 AWSSD 508
WS D
Sbjct: 119 QWSPD 123
Score = 34.3 bits (75), Expect = 0.090
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
++S S D + +W+++ G + L H +YV ++P + + S S D + RI+
Sbjct: 127 LISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 181
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +1
Query: 607 VFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHS 726
V +F+P S L+ + D +++W + +G+ K +P+ S
Sbjct: 16 VLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVS 55
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 350 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI 463
K V +V F P LA++ AD IK+W G+ EK +
Sbjct: 14 KPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKV 51
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 9/79 (11%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLK---------TLKGHSNYVFCCNFNPQSNLIVSGSFDE 666
L+ +A D +K+W ++SG+ K +L H V F+P L+ SG+
Sbjct: 27 LLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSGELLASGADGG 86
Query: 667 SVRIWDVRTGKCLKPLPAH 723
+ IW + + + H
Sbjct: 87 ELFIWKLHPSETNQSWKVH 105
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/78 (30%), Positives = 41/78 (52%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
++ S S DKT+KVW+L++ +C TLK H V + ++S S D ++++W
Sbjct: 324 VLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTV--TSLLCWDKCLISSSLDGTIKLWACSE 381
Query: 694 GKCLKPLPAHSDPVSAVH 747
+ LK + +S VH
Sbjct: 382 NESLKVVQTRKQELS-VH 398
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +1
Query: 544 LKVWELSSGKCL-KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPA 720
L W G + L+GH N + S+ + S S D ++ IWD +G+C++ +
Sbjct: 168 LHSWSCFPGLAMVAALEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSINL 227
Query: 721 HSDPVSAV 744
++ S +
Sbjct: 228 QAEAGSLI 235
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTL 588
+ S S D TL +W+ +SG+C++++
Sbjct: 202 LFSVSGDGTLLIWDCNSGQCVRSI 225
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/56 (32%), Positives = 35/56 (62%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
L+ S+S D T+KVW ++ KCL+++ H + + + +L+ +GS D +V++W
Sbjct: 249 LLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSV-MSGFDDLVFTGSADGTVKVW 303
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/50 (28%), Positives = 31/50 (62%)
Frame = +1
Query: 595 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAV 744
H++ V + + + L+ S S+D ++++W + KCL+ + AH D +++V
Sbjct: 234 HNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSV 283
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLK-TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW--- 681
++ S D + WE S LKGH + V C NL++SGS D+++ +W
Sbjct: 338 IVYCGSSDGLVNYWERSKRSFTGGILKGHKSAVLCLGI--AGNLLLSGSADKNICVWRRD 395
Query: 682 -DVRTGKCLKPLPAHSDPVSAV 744
++ +CL L H PV +
Sbjct: 396 PSDKSHQCLSVLTGHMGPVKCL 417
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +2
Query: 344 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDV 493
H AVSS+ L SSS D IK+W D K ++I H I+ V
Sbjct: 234 HNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSV 283
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/78 (26%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
L+ + +DD ++++++ + K ++ +GH++ + F+ ++S S D S+RIWDV
Sbjct: 529 LLATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVIL 588
Query: 694 GKCLKPLPAHSD-PVSAV 744
K + + H D P++A+
Sbjct: 589 AKQIDGV--HVDVPITAL 604
Score = 35.9 bits (79), Expect = 0.029
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
GHT ++ + FS +G+W+ SSS D ++IW
Sbjct: 555 GHTDRITDLCFSEDGKWVISSSMDGSLRIW 584
Score = 32.3 bits (70), Expect = 0.36
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +1
Query: 514 LIVSASDDKTLKVW--ELSSG--KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
+++SAS D +LK+W + + G + L+ GHS C F I+S D + R++
Sbjct: 282 VLMSASADNSLKMWIFDTNDGDPRLLRFRSGHSAPPLCIRFYSNGRHILSAGQDRAFRLF 341
Query: 682 DV 687
V
Sbjct: 342 SV 343
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/82 (24%), Positives = 42/82 (51%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
L++SA LKVW+ + LK+ + ++ + L+ + + D +R++DV T
Sbjct: 488 LMISAGYHGDLKVWDFKKRE-LKSQWDVGCSLVKIVYHRVNGLLATVADDFVIRLYDVVT 546
Query: 694 GKCLKPLPAHSDPVSAVHFNRD 759
K ++ H+D ++ + F+ D
Sbjct: 547 LKMVREFRGHTDRITDLCFSED 568
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/84 (23%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
+L+ D+ + + ++GK L TL GH ++ F ++P +G+ D++ R+WD+R
Sbjct: 288 KLLTIVGDNPESLLVDPNTGKTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIR 347
Query: 691 T-GKCLKPLPAHSDPVSAVHFNRD 759
K + L + + ++ + D
Sbjct: 348 NLSKSVAVLRGNLGAIRSIRYTSD 371
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
+ + S D T+K W L G L T+ GH + V + ++ SGS+D +VR+W +
Sbjct: 600 VYTGSGDNTIKAWSLQDGSLLCTMSGHKSVV--STLVVVNGVLYSGSWDGTVRLWSLSDN 657
Query: 697 KCLKPL 714
L L
Sbjct: 658 SLLTVL 663
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 356 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGIS 487
+ ++ +S G + + S D IK W DG T+SGHK +S
Sbjct: 589 IHALAYSEYGH-VYTGSGDNTIKAWSLQDGSLLCTMSGHKSVVS 631
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/84 (22%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
+L+ D+ + + ++GK L+TL GH ++ F ++P +G+ D++ R+WD+R
Sbjct: 290 KLLAIVGDNPEGLIVDPNTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIR 349
Query: 691 T-GKCLKPLPAHSDPVSAVHFNRD 759
+ + L + + ++ + D
Sbjct: 350 NLSQSVTVLKGNLGAIRSIRYTSD 373
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVR 690
L+ S SDD ++K+W ++ G + T+K +N + C F ++ + GS D V +D+R
Sbjct: 591 LLASGSDDGSVKLWSINQGVSIGTIKTKAN-ICCVQFPSETGRSLAFGSADHKVYYYDLR 649
Query: 691 TGKC-LKPLPAHSDPVSAVHF 750
K L + H VS V F
Sbjct: 650 NPKLPLCTMIGHHKTVSYVRF 670
Score = 31.5 bits (68), Expect = 0.63
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
T+ GH K VS V+F + L SSS D +K+W
Sbjct: 657 TMIGHHKTVSYVRF-VDSSTLVSSSTDNTLKLW 688
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Frame = +1
Query: 517 IVSASDDKTLKVWELS---SG---KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 678
+VS+S D TLK+W+LS SG L + GH+N + I +GS V +
Sbjct: 676 LVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFV 735
Query: 679 W 681
+
Sbjct: 736 Y 736
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVR 690
L+ S SDD ++K+W ++ G + T+K +N + C F ++ + GS D V +D+R
Sbjct: 591 LLASGSDDGSVKLWSINQGVSIGTIKTKAN-ICCVQFPSETGRSLAFGSADHKVYYYDLR 649
Query: 691 TGKC-LKPLPAHSDPVSAVHF 750
K L + H VS V F
Sbjct: 650 NPKLPLCTMIGHHKTVSYVRF 670
Score = 31.5 bits (68), Expect = 0.63
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
T+ GH K VS V+F + L SSS D +K+W
Sbjct: 657 TMIGHHKTVSYVRF-VDSSTLVSSSTDNTLKLW 688
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Frame = +1
Query: 517 IVSASDDKTLKVWELS---SG---KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 678
+VS+S D TLK+W+LS SG L + GH+N + I +GS V +
Sbjct: 676 LVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFV 735
Query: 679 W 681
+
Sbjct: 736 Y 736
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHS----NYVFCCNFNPQSNLIVSGSFDESVRI 678
+ VSAS D T ++LSSG CL + S NY F+P ++ +G+ V+I
Sbjct: 322 KYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAA-FHPDGLILGTGTAQSIVKI 380
Query: 679 WDVRTGKCLKPLPAHSDPVSAVHFNRD 759
WDV++ + H+ ++++ F+ +
Sbjct: 381 WDVKSQANVAKFGGHNGEITSISFSEN 407
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
+I + D T +++ SG+ L TL GHS V F ++L+++ S D++VRIW
Sbjct: 236 VIATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIW 291
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG-AYDGKF--EKTISGHKMGISDV 493
TL GH+K V+S+KF + + + ++S+DK ++IWG + DG + T+ H + V
Sbjct: 259 TLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAV 315
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSG---KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 684
L+++AS DKT+++W S TLK HS V + + VS S D + +D
Sbjct: 278 LVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYD 337
Query: 685 VRTGKCL 705
+ +G CL
Sbjct: 338 LSSGLCL 344
Score = 31.5 bits (68), Expect = 0.63
Identities = 12/49 (24%), Positives = 26/49 (53%)
Frame = +1
Query: 544 LKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
+K+W++ S + GH+ + +F+ + + + D VR+WD+R
Sbjct: 378 VKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALD-GVRLWDLR 425
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +2
Query: 359 SSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
++ F P+G L + +A ++KIW GH I+ +++S +
Sbjct: 358 TAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSEN 407
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 472
TL GHTK VS V+F G + ++ D +K+W DG+ +T GH
Sbjct: 108 TLQGHTKTVSYVRFLDGGT-VVTAGTDGCLKLWSVEDGRVIRTYEGH 153
Score = 35.5 bits (78), Expect = 0.039
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN--LIVSGSFDESVRIWDVR 690
+V+A D LK+W + G+ ++T +GH N + N L GS + V ++D R
Sbjct: 127 VVTAGTDGCLKLWSVEDGRVIRTYEGHVNNRNFVGLSVWRNGALFGCGSENNRVFVYDRR 186
Query: 691 TGK 699
GK
Sbjct: 187 WGK 189
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +2
Query: 338 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 472
+GH KAVS VKF N E LAS+S D +++W D +T GH
Sbjct: 546 SGHKKAVSYVKFLSNNE-LASASTDSTLRLWDVKDNLPVRTFRGH 589
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVR 690
++VS SDD +KVW + + +N + C +NP SN I GS D + +D+R
Sbjct: 478 MLVSGSDDCKVKVWCTRQEASVINIDMKAN-ICCVKYNPGSSNYIAVGSADHHIHYYDLR 536
Query: 691 T-GKCLKPLPAHSDPVSAVHF 750
+ L H VS V F
Sbjct: 537 NISQPLHVFSGHKKAVSYVKF 557
Score = 34.7 bits (76), Expect = 0.068
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
+ SAS D TL++W++ ++T +GH+N S + GS V ++
Sbjct: 563 LASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEYLACGSETNEVYVY 617
Score = 31.9 bits (69), Expect = 0.48
Identities = 15/59 (25%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFN-PQSNLIVSGSFDESVRIWDVR 690
I S+ + + VW++++ + L + H + +F+ + +++VSGS D V++W R
Sbjct: 436 IASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTR 494
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 613 CCNFNP-QSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNR 756
C ++N + N I S ++ V +WDV T + L H +V F+R
Sbjct: 425 CLSWNKHEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSR 473
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSS-GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
I S D + ++L + + L GH V F +N + S S D ++R+WDV+
Sbjct: 521 IAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFL-SNNELASASTDSTLRLWDVKD 579
Query: 694 GKCLKPLPAHSD 729
++ H++
Sbjct: 580 NLPVRTFRGHTN 591
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
L+ SAS D++ K+W S KCL ++ K H + + + + + +GS D+ +++W+ +
Sbjct: 206 LLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVS-KDGFVYTGSADKKIKVWNKK 264
Query: 691 TGK--CLKPLPAHSDPVSAVHFNRD 759
K + L H V+A+ + D
Sbjct: 265 DKKHSLVATLTKHLSAVNALAISED 289
Score = 38.3 bits (85), Expect = 0.006
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 13/91 (14%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWE-LSSG-------KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 666
+++ S + D+++ VWE L +G + L+GH + C S+L++SGS D+
Sbjct: 291 KVLYSGACDRSILVWERLINGDDEELHMSVVGALRGHRKAIMCLAV--ASDLVLSGSADK 348
Query: 667 SVRIW-----DVRTGKCLKPLPAHSDPVSAV 744
S+R+W + CL L H+ PV ++
Sbjct: 349 SLRVWRRGLMEKEGYSCLAVLEGHTKPVKSL 379
Score = 35.5 bits (78), Expect = 0.039
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 326 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGISDVAWS 502
K T H AVSS+ S +G L S+S D+ KIW D K +I H I+ + S
Sbjct: 185 KCTWVHHVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVS 244
Query: 503 SD 508
D
Sbjct: 245 KD 246
Score = 35.5 bits (78), Expect = 0.039
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Frame = +1
Query: 514 LIVSASDDKTLKVW-----ELSSGKCLKTLKGHSNYVFCCNFN---PQSN-----LIVSG 654
L++S S DK+L+VW E CL L+GH+ V + SN ++ SG
Sbjct: 340 LVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPVKSLAVSVSDSDSNSDYSCMVYSG 399
Query: 655 SFDESVRIWDVR 690
S D S+++W++R
Sbjct: 400 SLDLSLKVWNLR 411
Score = 34.7 bits (76), Expect = 0.068
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 595 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPL-PAHSDPVSAVHFNRD 759
H + V + +L+ S S+D S +IW KCL + AH D ++A+ ++D
Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKD 246
Score = 33.5 bits (73), Expect = 0.16
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Frame = +2
Query: 305 WRTN--YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE--KTISGH 472
WRT+ L H A++++ S +G ++ + SADK IK+W D K T++ H
Sbjct: 219 WRTSDFKCLDSIEKAHDDAINAIVVSKDG-FVYTGSADKKIKVWNKKDKKHSLVATLTKH 277
Query: 473 KMGISDVAWSSD 508
++ +A S D
Sbjct: 278 LSAVNALAISED 289
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 41.9 bits (94), Expect = 4e-04
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKT---LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW- 681
L+ S D ++ VWE G + L+GH+ V C S+++ SGS D++VR+W
Sbjct: 274 LLHSGGSDGSILVWERDDGGDIVVVGMLRGHTESVLCLAV--VSDILCSGSADKTVRLWK 331
Query: 682 -DVRTGKCLKPLPAHSDPVSAV 744
+ CL L H PV +
Sbjct: 332 CSAKDYSCLAMLEGHLGPVKCL 353
Score = 33.9 bits (74), Expect = 0.12
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = +2
Query: 344 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKMGISDVAWSSDAG*L 520
H AVS + S +G L S S D+ +KIW D K E + H I+ VA S +
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGDIY 223
Query: 521 --SVLVTIKL*KFGNLVQENV*KRLKVTVI 604
S IK+ + N+ +ENV K+ K +++
Sbjct: 224 TGSSDQRIKVWR-KNINEENVKKKRKHSLV 252
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 640 LIVSGSFDESVRIWDVRTGKCLKPLP-AHSDPVSAV 744
L+ S S+D +++IW KCL+ AH D ++AV
Sbjct: 179 LLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAV 214
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSS--GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
L+ S D +++VW ++ L +K H + V C + + ++SGS D+++R+W +
Sbjct: 865 LLFSGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGSADKTIRVWQI 924
Query: 688 RTGK 699
GK
Sbjct: 925 VKGK 928
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Frame = +2
Query: 224 QTHGGPSASLSVQIHYHNLLHSQTS----LQWRTNY---TLKFTLAGHTKAVSSVKFSPN 382
+ H S +++ I++ LL S S W N TL + + H V+ S
Sbjct: 847 EMHQSGSGAVTALIYHKGLLFSGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSET 906
Query: 383 GEWLASSSADKLIKIWGAYDGKFE 454
GE + S SADK I++W GK E
Sbjct: 907 GECVLSGSADKTIRVWQIVKGKLE 930
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 41.5 bits (93), Expect = 6e-04
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
I S S D ++++W+ SS KC+KTL+ HS++V+ P + S S V IWDV +
Sbjct: 270 IFSGSWDMSVRIWDRSSMKCVKTLR-HSDWVW--GLAPHETTLASTS-GSDVYIWDVSSE 325
Query: 697 KCLKPLP-AH 723
L +P AH
Sbjct: 326 TPLAIIPDAH 335
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +1
Query: 643 IVSGSFDESVRIWDVRTGKCLKPLPAHSD 729
I SGS+D SVRIWD + KC+K L HSD
Sbjct: 270 IFSGSWDMSVRIWDRSSMKCVKTL-RHSD 297
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 445
TL GHT+AV +V + + + +S D ++++W +G
Sbjct: 157 TLYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEG 194
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +1
Query: 577 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
+ TL GH+ V + L+ + +D VR+WD+ G
Sbjct: 155 IDTLYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEG 194
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 41.5 bits (93), Expect = 6e-04
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +1
Query: 520 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRTG 696
VS SDD ++K+W ++ + L T+ +N V C F+ SN L+ GS D V +D+R
Sbjct: 825 VSGSDDCSVKLWSINEKRSLGTIWSPAN-VCCVQFSSYSNHLLAFGSADYKVYCYDLRYV 883
Query: 697 KC-LKPLPAHSDPVSAVHF 750
K L H VS V F
Sbjct: 884 KTPWCTLAGHEKAVSYVKF 902
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
TLAGH KAVS VKF + E + S+S D +K+W
Sbjct: 889 TLAGHEKAVSYVKFM-DSETIVSASTDNSLKLW 920
Score = 35.1 bits (77), Expect = 0.051
Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 508 RRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWD 684
+ + S D +++W+ +G+ H + +F+P VSGS D SV++W
Sbjct: 778 KNYLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWS 837
Query: 685 VRTGKCL 705
+ + L
Sbjct: 838 INEKRSL 844
Score = 31.9 bits (69), Expect = 0.48
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 8/37 (21%)
Frame = +1
Query: 517 IVSASDDKTLKVWE--------LSSGKCLKTLKGHSN 603
IVSAS D +LK+W LS G C T KGH+N
Sbjct: 908 IVSASTDNSLKLWNLNKTNSSGLSPGACSLTYKGHTN 944
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
+ S DK K+W L SG T+ H + + P NL+ +GS+D++++ WD R
Sbjct: 87 VFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDTR 144
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELS-SGKCL----KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 678
++V+ S D ++ WE+S SG L K H V C + + SG D+ ++
Sbjct: 39 ILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKM 98
Query: 679 WDVRTGKCLKPLPAHSDPVSAV 744
W + +G + H P++A+
Sbjct: 99 WPLLSGGQPVTVAMHEGPIAAM 120
Score = 32.3 bits (70), Expect = 0.36
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 5/44 (11%)
Frame = +1
Query: 619 NFNPQSNLIVSGSFDESVRIWDV-RTGKCLKPLP----AHSDPV 735
+F+P+++++V+ S+D VR W++ R+G L P +H PV
Sbjct: 32 SFSPRADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPV 75
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/77 (24%), Positives = 33/77 (42%)
Frame = +2
Query: 344 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDAG*LS 523
H + V + +G + S DK K+W G T++ H+ I+ +AW L+
Sbjct: 71 HDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLA 130
Query: 524 VLVTIKL*KFGNLVQEN 574
K K+ + Q+N
Sbjct: 131 TGSWDKTLKYWDTRQQN 147
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Frame = +2
Query: 353 AVSSVKFSPNGEWLASSSADKLIKIW-----GAYDGKFEKTISGHKMGISDVAWSSD 508
++SS+ FSP + L ++S D ++ W GA K H + AW D
Sbjct: 27 SISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDD 83
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/47 (25%), Positives = 20/47 (42%)
Frame = +1
Query: 619 NFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRD 759
NF+P + D + WD + + LK + + P+ FN D
Sbjct: 253 NFHPVHGTFATAGSDGAFNFWDKDSKQRLKAMSRCNQPIPCSSFNHD 299
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSGSFDESVRIW 681
+++ DDKT+KVW+ ++G T +GH Y C ++ I S + D ++ W
Sbjct: 479 VITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW 535
Score = 34.7 bits (76), Expect = 0.068
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 684
+I DD T++++ + + LKGHS + F+ N++VS D + +W+
Sbjct: 891 IIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 947
Score = 32.3 bits (70), Expect = 0.36
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS-GSFDESVRIWDVRT 693
++SAS K + ++ + + K + T F+PQ N I++ G D +++I++VR
Sbjct: 850 VMSASGGK-ISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRV 908
Query: 694 GKCLKPLPAHSDPVSAVHFN 753
+ L HS ++ + F+
Sbjct: 909 DEVKSKLKGHSKRITGLAFS 928
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 344 HTKAVSSVKFS-PNGEW-LASSSADKLIKIWGAYDGKFEKTISGHKMGISDV 493
H V+ + FS PN + + + DK IK+W A G T GH+ + V
Sbjct: 461 HVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSV 512
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 323 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 445
+K L GH+K ++ + FS L SS AD + +W DG
Sbjct: 911 VKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT-DG 950
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSGSFDESVRIW 681
+++ DDKT+KVW+ ++G T +GH Y C ++ I S + D ++ W
Sbjct: 479 VITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW 535
Score = 34.7 bits (76), Expect = 0.068
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 684
+I DD T++++ + + LKGHS + F+ N++VS D + +W+
Sbjct: 891 IIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 947
Score = 32.3 bits (70), Expect = 0.36
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS-GSFDESVRIWDVRT 693
++SAS K + ++ + + K + T F+PQ N I++ G D +++I++VR
Sbjct: 850 VMSASGGK-ISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRV 908
Query: 694 GKCLKPLPAHSDPVSAVHFN 753
+ L HS ++ + F+
Sbjct: 909 DEVKSKLKGHSKRITGLAFS 928
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 344 HTKAVSSVKFS-PNGEW-LASSSADKLIKIWGAYDGKFEKTISGHKMGISDV 493
H V+ + FS PN + + + DK IK+W A G T GH+ + V
Sbjct: 461 HVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSV 512
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 323 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 445
+K L GH+K ++ + FS L SS AD + +W DG
Sbjct: 911 VKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT-DG 950
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Frame = +1
Query: 514 LIVSASDDKTLKVWEL----SSGKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRI 678
L+ + SDD W++ + + + K H+ V C + NP I +GS+DE++R+
Sbjct: 178 LVYTGSDDCKFSCWDIRDSPADNRVFQNSKVHTMGVCCISSNPSDPYSIFTGSYDETLRV 237
Query: 679 WDVRT 693
WD R+
Sbjct: 238 WDTRS 242
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +2
Query: 293 TSLQWRTNYTLKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAY--DGKFEKTI 463
+SLQ + +L GHTKAV+++ +S + LAS+ D + +W + D K +
Sbjct: 142 SSLQTEMPSRMSISLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKVRAF 201
Query: 464 SGHKMGISDVAWS 502
H + DV WS
Sbjct: 202 LHHNAPVKDVKWS 214
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 580 KTLKGH--SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFN 753
K +GH + + CNF+P + SGS D SV ++D ++ +K L A+ P V ++
Sbjct: 378 KRFEGHWVAGFPIKCNFSPDGETLASGSSDGSVYMYDYKSTALIKKLKAYEQPCVNVSYH 437
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRT 693
++S D T +++++ G ++ K V F+P + N+ +SG S+R+WD+R
Sbjct: 220 LLSCGYDCTSRLFDVERGVETQSFK-EDEVVGVVKFHPDNCNVFLSGGSKGSLRLWDIRA 278
Query: 694 GKCLKPLPAHSDPVSAVHF 750
K + P+ V F
Sbjct: 279 NKFVHEYVRDLGPILDVEF 297
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +1
Query: 514 LIVSASDDKTLKVWEL---SSGKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIW 681
LI + D L+VW+ + + HS+++ C ++ S ++S S+D + +W
Sbjct: 327 LIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIMLW 386
Query: 682 DVRTGKCLKPLPAHSDPV 735
D+RT L + H+D V
Sbjct: 387 DLRTAWPLSVIDTHNDKV 404
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +1
Query: 562 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 699
S G+ + +L GH+ V + P+ ++I S S+D SVR WDV TGK
Sbjct: 260 SEGEAVTSLVGHTQCVSSVVW-PEHDVIYSSSWDHSVRRWDVETGK 304
Score = 31.9 bits (69), Expect = 0.48
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGISDVAWSSD 508
+L GHT+ VSSV + P + + SSS D ++ W GK + G + DV S
Sbjct: 267 SLVGHTQCVSSVVW-PEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVGGESS 325
Query: 509 A 511
A
Sbjct: 326 A 326
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGK-CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
+I S+S D +++ W++ +GK L G + S LI +G D +R+WD R
Sbjct: 285 VIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVG-GESSALIAAGGSDPILRVWDPR 343
Query: 691 TGKCLKPL---PAHSDPVSAVHFNR 756
P+ +HS +SA +++
Sbjct: 344 KPGTSAPVFQFSSHSSWISACKWHK 368
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/65 (23%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCL---------KTLKGHSNYVFCCNFNPQSNLIVSGSFDES 669
+ +AS D+TL++++ + + K L+GH V + N++ S S+D +
Sbjct: 169 VATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHKASVQSVSAQKSGNMVCSSSWDCT 228
Query: 670 VRIWD 684
+ +W+
Sbjct: 229 INLWN 233
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE 454
L GH +V SV +G + SSS D I +W + E
Sbjct: 201 LRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTNESTSE 240
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 678
++SAS D + +W+L + L + H++ V ++ + +VSG D ++RI
Sbjct: 374 LLSASYDGKIMLWDLRTAWPLSVIDTHNDKVLSADW-WKGESVVSGGADSNLRI 426
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/56 (33%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGH-SNYVFCCNFNPQSNLIVSGSFDESVRI 678
LIV+A +D T +VW + G L+ +K H ++ C ++P S+L+V+ FD ++++
Sbjct: 290 LIVTAGEDCTCRVWGVD-GTQLEVIKEHIGRGIWRCLYDPNSSLLVTAGFDSAIKV 344
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCL-KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
IVS SDD++ ++WE+ S + + L GHS V+ C + +LIV+ D + R+W V
Sbjct: 250 IVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCIS--DSLIVTAGEDCTCRVWGV-D 306
Query: 694 GKCLKPLPAH 723
G L+ + H
Sbjct: 307 GTQLEVIKEH 316
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 586 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPL 714
L GH +F ++ + IVS S D S RIW++ + + + P+
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPV 273
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 41.1 bits (92), Expect = 8e-04
Identities = 19/56 (33%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGH-SNYVFCCNFNPQSNLIVSGSFDESVRI 678
LIV+A +D T +VW + G L+ +K H ++ C ++P S+L+V+ FD ++++
Sbjct: 290 LIVTAGEDCTCRVWGVD-GTQLEVIKEHIGRGIWRCLYDPNSSLLVTAGFDSAIKV 344
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCL-KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
IVS SDD++ ++WE+ S + + L GHS V+ C + +LIV+ D + R+W V
Sbjct: 250 IVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCIS--DSLIVTAGEDCTCRVWGV-D 306
Query: 694 GKCLKPLPAH 723
G L+ + H
Sbjct: 307 GTQLEVIKEH 316
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 586 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPL 714
L GH +F ++ + IVS S D S RIW++ + + + P+
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPV 273
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/59 (30%), Positives = 36/59 (61%)
Frame = +1
Query: 508 RRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 684
++ I + S+D ++ +++L SG + LK HS+ V CN++P ++S S+D + W+
Sbjct: 413 QKYIYTGSNDSSVYIYDLVSGDKVAVLKHHSSPVRDCNWHPYYPTLISSSWDGDLVKWE 471
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKC-LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
R +V+ S D ++ V++L + + L+T+ S+ C + NLI+SGS D ++WD
Sbjct: 242 REVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGSDDNLCKVWDR 301
Query: 688 R 690
R
Sbjct: 302 R 302
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +1
Query: 514 LIVSASDDKTLKVWE----LSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
LI+S SDD KVW+ + K L GH V + +S D+++++W
Sbjct: 286 LILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLW 345
Query: 682 DVR 690
D+R
Sbjct: 346 DIR 348
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +1
Query: 592 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHF 750
G+S +F F+ +V+GS D+S+ ++D+ + AH+ V+ V F
Sbjct: 227 GYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCF 279
Score = 32.7 bits (71), Expect = 0.27
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Frame = +1
Query: 577 LKTLKGHS--NYVFCCNFNPQSNL----IVSGSFDESVRIWDVRTGKCLKPLPAHSDPV 735
+ T KGHS + C F+P + I +GS D SV I+D+ +G + L HS PV
Sbjct: 388 VSTYKGHSVLRTLIRCYFSPAHSTGQKYIYTGSNDSSVYIYDLVSGDKVAVLKHHSSPV 446
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
+I D ++K+ K L+T GH V C +P +N +V+GS D +V +W +
Sbjct: 2640 IITGGHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLWRI 2697
Score = 31.9 bits (69), Expect = 0.48
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +1
Query: 577 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPL 714
++ L+GH + CC + ++VS S V + +R G+ ++ L
Sbjct: 2742 IQVLRGHRRELVCCCVSSDQGVVVSSSESSDVLLHSIRKGRLIRRL 2787
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +1
Query: 544 LKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKCL 705
++V +++S K+L GH + V P + L+++ S DESVR+W+V TG C+
Sbjct: 110 IRVIDVNSETIHKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNVETGICI 164
Score = 36.3 bits (80), Expect = 0.022
Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLK---GHSNYVFCCNFNPQS-NLIVSGSFDESVRI 678
+L+++AS D+++++W + +G C+ GH V +F+P S D +++I
Sbjct: 142 QLVITASKDESVRLWNVETGICILIFAGAGGHRYEVLSVDFHPSDIYRFASCGMDTTIKI 201
Query: 679 WDVR 690
W ++
Sbjct: 202 WSMK 205
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSGSFDESVRIW 681
+V+ DDK +KVW+L SGK L T +GH Y C + I S + D ++ W
Sbjct: 470 VVTCGDDKLIKVWDL-SGKKLFTFEGHEAPVYSICPHQKENIQFIFSTALDGKIKAW 525
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSGSFDESVRIW 681
+ + DDKT+KVW+ ++G T +GH Y C ++ I S + D ++ W
Sbjct: 479 VTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAW 535
Score = 34.7 bits (76), Expect = 0.068
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 684
+I DD T++++ + + LKGHS + F+ N++VS D + +W+
Sbjct: 880 IIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 936
Score = 32.3 bits (70), Expect = 0.36
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS-GSFDESVRIWDVRT 693
++SAS K + ++ + + K + T F+PQ N I++ G D +++I++VR
Sbjct: 839 VMSASGGK-ISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRV 897
Query: 694 GKCLKPLPAHSDPVSAVHFN 753
+ L HS ++ + F+
Sbjct: 898 DEVKSKLKGHSKRITGLAFS 917
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 344 HTKAVSSVKFS-PNGEWLASSSAD-KLIKIWGAYDGKFEKTISGHKMGISDV 493
H V+ + FS PN + ++ D K IK+W A G T GH+ + +
Sbjct: 461 HVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSI 512
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 323 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 445
+K L GH+K ++ + FS L SS AD + +W DG
Sbjct: 900 VKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT-DG 939
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSGSFDESVRIW 681
+ + DDKT+KVW+ ++G T +GH Y C ++ I S + D ++ W
Sbjct: 479 VTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAW 535
Score = 34.7 bits (76), Expect = 0.068
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 684
+I DD T++++ + + LKGHS + F+ N++VS D + +W+
Sbjct: 880 IIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 936
Score = 32.3 bits (70), Expect = 0.36
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS-GSFDESVRIWDVRT 693
++SAS K + ++ + + K + T F+PQ N I++ G D +++I++VR
Sbjct: 839 VMSASGGK-ISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRV 897
Query: 694 GKCLKPLPAHSDPVSAVHFN 753
+ L HS ++ + F+
Sbjct: 898 DEVKSKLKGHSKRITGLAFS 917
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 344 HTKAVSSVKFS-PNGEWLASSSAD-KLIKIWGAYDGKFEKTISGHKMGISDV 493
H V+ + FS PN + ++ D K IK+W A G T GH+ + +
Sbjct: 461 HVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSI 512
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 323 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 445
+K L GH+K ++ + FS L SS AD + +W DG
Sbjct: 900 VKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT-DG 939
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +1
Query: 562 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 699
S G+ + +L GH+ V + P+ ++I S S+D SVR WDV TGK
Sbjct: 260 SEGEAVTSLVGHTQCVSSVVW-PEHDVIYSSSWDHSVRRWDVETGK 304
Score = 36.3 bits (80), Expect = 0.022
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Frame = +1
Query: 514 LIVSASDDKTLKVWEL---SSGKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIW 681
LI + D L+VW+ + + HS+++ C ++ S ++S S+D + +W
Sbjct: 327 LIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIMLW 386
Query: 682 DVRTGKCLKPLPAHSDPV 735
D+RT K HS P+
Sbjct: 387 DLRTAVMTK--HTHSFPL 402
Score = 31.9 bits (69), Expect = 0.48
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGISDVAWSSD 508
+L GHT+ VSSV + P + + SSS D ++ W GK + G + DV S
Sbjct: 267 SLVGHTQCVSSVVW-PEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVGGESS 325
Query: 509 A 511
A
Sbjct: 326 A 326
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGK-CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
+I S+S D +++ W++ +GK L G + S LI +G D +R+WD R
Sbjct: 285 VIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVG-GESSALIAAGGSDPILRVWDPR 343
Query: 691 TGKCLKPL---PAHSDPVSAVHFNR 756
P+ +HS +SA +++
Sbjct: 344 KPGTSAPVFQFSSHSSWISACKWHK 368
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/65 (23%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCL---------KTLKGHSNYVFCCNFNPQSNLIVSGSFDES 669
+ +AS D+TL++++ + + K L+GH V + N++ S S+D +
Sbjct: 169 VATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHKASVQSVSAQKSGNMVCSSSWDCT 228
Query: 670 VRIWD 684
+ +W+
Sbjct: 229 INLWN 233
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE 454
L GH +V SV +G + SSS D I +W + E
Sbjct: 201 LRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTNESTSE 240
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
L+ +A DD+ +K+ G ++ LKGH V +F+P L+ S +V W+++
Sbjct: 118 LLAAAGDDEGIKLINTFDGSIVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQN 177
Query: 694 G 696
G
Sbjct: 178 G 178
Score = 36.7 bits (81), Expect = 0.017
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Frame = +2
Query: 329 FTLAG-HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKM--GISDVAW 499
F L G H +A+ + ++PNG+++A+S DK + +W D ++ I HK I ++W
Sbjct: 231 FALRGDHLEAICYLTWAPNGKYIATSGLDKQVLLW---DVDKKQDIDRHKFEERICCMSW 287
Query: 500 SSDAG*LSVL 529
+ LSV+
Sbjct: 288 KPNGNALSVI 297
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/65 (30%), Positives = 36/65 (55%)
Frame = +2
Query: 281 LHSQTSLQWRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT 460
L+ S +++TN T +FTL + + F+ +G LA++ D+ IK+ +DG +
Sbjct: 88 LYKFPSGEFQTNIT-RFTLP-----IRVLAFNGSGSLLAAAGDDEGIKLINTFDGSIVRV 141
Query: 461 ISGHK 475
+ GHK
Sbjct: 142 LKGHK 146
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG 469
L GH V+ + F PNGE LAS + W +G T+ G
Sbjct: 142 LKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQNGVVSFTLKG 186
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDAG 514
L H V+S+ S + LAS S D +K++ G+F+ I+ + I +A++
Sbjct: 58 LRHHQDGVTSLALSNDSTLLASGSIDHCVKLYKFPSGEFQTNITRFTLPIRVLAFNGSGS 117
Query: 515 *LS 523
L+
Sbjct: 118 LLA 120
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/58 (24%), Positives = 33/58 (56%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
L+ + + + V L+ G+ +++++ H + V C S ++ +GS+D +V +WD+
Sbjct: 1018 LVSCGNWENSFHVISLTDGRVVQSIRHHKDVVSCVAVTADSTILATGSYDTTVMVWDI 1075
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +1
Query: 547 KVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKP--LPA 720
++++L + + + H YV P+S+L+VS S D+++RIWD+R +P +
Sbjct: 437 RLFDLRENGFISSWRAHDGYVTKL-VAPESHLLVSSSLDKTLRIWDLRKSWTPQPFVVKG 495
Query: 721 HSDPVS 738
H+D VS
Sbjct: 496 HNDGVS 501
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/55 (23%), Positives = 27/55 (49%)
Frame = +1
Query: 541 TLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL 705
+++ WEL+S C+ + H V + + S D ++ +W+ +TGK +
Sbjct: 260 SVQKWELASLSCVSSYHAHEEVVNDIGILSSTGKVAS--CDGTIHVWNSQTGKLI 312
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLK--TLKGHSNYV 609
L+VS+S DKTL++W+L + +KGH++ V
Sbjct: 467 LLVSSSLDKTLRIWDLRKSWTPQPFVVKGHNDGV 500
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +2
Query: 374 SPNGEWLASSSADKLIKIWGAYDGKFEK--TISGHKMGISDVA-WSSD 508
+P L SSS DK ++IW + + GH G+S + W D
Sbjct: 462 APESHLLVSSSLDKTLRIWDLRKSWTPQPFVVKGHNDGVSGFSIWGKD 509
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSGSFDESVRIW 681
+V+ +DKT+KVW+ +G L T +GH Y C + I S + D ++ W
Sbjct: 481 VVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
+I DD +++++ + + LKGH V F+ N++VS D + +W +
Sbjct: 901 IIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSM 958
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 344 HTKAVSSVKFS-PNGEW-LASSSADKLIKIWGAYDGKFEKTISGHKMGISDV 493
H V+ + FS PN + + + DK IK+W A G T GH+ + V
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSV 514
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2
Query: 323 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 466
+K L GH K V+ + FS L SS AD + +W + DG +EK S
Sbjct: 921 VKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVW-SMDG-WEKQAS 966
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSGSFDESVRIW 681
+V+ +DKT+KVW+ +G L T +GH Y C + I S + D ++ W
Sbjct: 481 VVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
+I DD +++++ + + LKGH V F+ N++VS D + +W +
Sbjct: 901 IIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSM 958
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2
Query: 344 HTKAVSSVKFS-PNGEW-LASSSADKLIKIWGAYDGKFEKTISGHKMGISDV 493
H V+ + FS PN + + + DK IK+W A G T GH+ + V
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSV 514
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2
Query: 323 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 466
+K L GH K V+ + FS L SS AD + +W + DG +EK S
Sbjct: 921 VKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVW-SMDG-WEKQAS 966
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
I SAS D +++W++SS + + GH V + N++VS D +VR+W+V
Sbjct: 72 IFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWNV 128
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 586 LKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRD 759
+ GH + V C NP I S S D +R+WD+ + + + P H V + + D
Sbjct: 52 MDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTD 110
Score = 32.7 bits (71), Expect = 0.27
Identities = 15/66 (22%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKG-HSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
R V+ S D++++++ + G + VFC ++ + ++SGS D ++R+W
Sbjct: 292 REFVTGSYDRSVRIFPYNGGHSREIYHTKRMQRVFCVKYSCDATYVISGSDDTNLRLWKA 351
Query: 688 RTGKCL 705
+ + L
Sbjct: 352 KASEQL 357
Score = 32.3 bits (70), Expect = 0.36
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 556 ELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
+L KC+ K H + V +F+P V+GS+D SVRI+ G
Sbjct: 267 KLDEAKCVH--KDHVSAVMDIDFSPTGREFVTGSYDRSVRIFPYNGG 311
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/58 (22%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 544 LKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKCLKPL 714
L +W + + +++ + ++ V FNP + NL+ + + D S+ I+D+R + +
Sbjct: 175 LDIWNHNRSQPVQSFQWGTDSVISVRFNPGEPNLLATSASDRSITIYDLRLSSAARKI 232
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +1
Query: 586 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHS 726
L+GH + V +F+P +L+ +GS D +RIWD + + AHS
Sbjct: 13 LRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHS 59
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
L GH +V V F P+ L + SAD ++IW
Sbjct: 13 LRGHRHSVMDVSFHPSKSLLFTGSADGELRIW 44
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +1
Query: 508 RRLIVSASDDKTLKVWELSSGKCLKTLKGHS--NYVFCCNFNP--QSNLIVSGSFDESVR 675
+ L+ + S D L++W+ + + + HS N V +P + I+S D +V+
Sbjct: 29 KSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVAASPWLGEDKIISQGRDGTVK 88
Query: 676 IWDVRTG 696
WD+ G
Sbjct: 89 CWDIEDG 95
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 344 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAY 439
H ++V +SP+ E +AS+S D + +W Y
Sbjct: 349 HRATCNAVSYSPDCELMASASEDATVALWKLY 380
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +1
Query: 550 VWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
VW+ + L TL GHS V +P IV+G+ DE++R W+V
Sbjct: 406 VWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
Score = 35.9 bits (79), Expect = 0.029
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS 505
G + V SV ++ G LA ++ ++IW K +T+ GH++ + +AWSS
Sbjct: 207 GVDETVCSVGWALRGTHLAIGTSSGTVQIWDVLRCKNIRTMEGHRLRVGALAWSS 261
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/74 (25%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +1
Query: 541 TLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK-CLKPLP 717
T+++W++ K ++T++GH V ++ S+++ SGS D+S+ D+RT + + L
Sbjct: 232 TVQIWDVLRCKNIRTMEGHRLRVGALAWS--SSVLSSGSRDKSILQRDIRTQEDHVSKLK 289
Query: 718 AHSDPVSAVHFNRD 759
H + + ++ D
Sbjct: 290 GHKSEICGLKWSSD 303
Score = 31.9 bits (69), Expect = 0.48
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 502
L GH + +K+S + LAS D + +W + + H + +AWS
Sbjct: 288 LKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWS 343
Score = 30.7 bits (66), Expect = 1.1
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY 439
TL GH+ V + SP+G+ + + + D+ ++ W +
Sbjct: 417 TLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNVF 452
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKT---LKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWD 684
++S + +WE +SG GH+ V ++P + N+ S S D SV +WD
Sbjct: 239 LLSGDCKSMIHLWEPASGSWAVDPIPFAGHTASVEDLQWSPAEENVFASCSVDGSVAVWD 298
Query: 685 VRTGKC-LKPLPAHSDPVSAVHFNR 756
+R GK AH+ V+ + +NR
Sbjct: 299 IRLGKSPALSFKAHNADVNVISWNR 323
Score = 31.9 bits (69), Expect = 0.48
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +2
Query: 338 AGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEK-TISGHKMGISDVAWS 502
AGHT +V +++SP E AS S D + +W GK + H ++ ++W+
Sbjct: 266 AGHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGKSPALSFKAHNADVNVISWN 322
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKC-LKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIW 681
++VSA D+ + +W+L K ++ L GH+++ + NP+ LI+S D +V +W
Sbjct: 223 ILVSADDESGIHLWDLRKTKFPVQELPGHTHWTWAVRCNPEYEELILSVGTDSAVNLW 280
Score = 31.5 bits (68), Expect = 0.63
Identities = 19/80 (23%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +1
Query: 520 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFN-PQSNLIVSGSFDESVRIWDVRTG 696
V+A+ + +++ W+L + K +++ +V ++N + +++VS + + +WD+R
Sbjct: 184 VAATSESSIQFWDLRTMKKNNSIE--RAHVRNVDYNLKREHILVSADDESGIHLWDLRKT 241
Query: 697 KC-LKPLPAHSDPVSAVHFN 753
K ++ LP H+ AV N
Sbjct: 242 KFPVQELPGHTHWTWAVRCN 261
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/81 (28%), Positives = 37/81 (45%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
++SAS D + +G + T +GH V+ C+ + + S S D + +IW+ TG
Sbjct: 29 LISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKNAIRAASASADFTAKIWNALTG 88
Query: 697 KCLKPLPAHSDPVSAVHFNRD 759
L H V A F+ D
Sbjct: 89 DELHSF-EHKHIVRACAFSED 108
Score = 35.9 bits (79), Expect = 0.029
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 520 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
++ +D + ++ +G+ + KGH V C + P SGS D +VRIW V
Sbjct: 239 IAGGEDMWVHRFDFQTGEEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRIWVV 294
Score = 35.5 bits (78), Expect = 0.039
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDGKFEKTISGH 472
GH V V+++P GE S S D ++IW G+ + E +SGH
Sbjct: 263 GHHGPVHCVRYAPGGESYTSGSEDGTVRIWVVGSVNHPEESNLSGH 308
Score = 32.7 bits (71), Expect = 0.27
Identities = 23/59 (38%), Positives = 26/59 (44%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
T GH AV S N AS+SAD KIW A G E HK + A+S D
Sbjct: 51 TFEGHKGAVWSCSLDKNAIRAASASADFTAKIWNALTGD-ELHSFEHKHIVRACAFSED 108
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHS-NYVFCCNFNPQSNLIVSGSFDES-VRIWDVR 690
+++ +K L++++L+ G+S + + N I+S D +R+WD+R
Sbjct: 112 LLTGGMEKILRIFDLNRPDAPPKEVGNSPGSIRTVEWLHSDNTILSSCTDTGDIRLWDIR 171
Query: 691 TGKCLKPLPAHSDPVSAVHFNRD 759
+ K + L S PV++ ++D
Sbjct: 172 SDKIVHTLETKS-PVTSAEVSQD 193
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/79 (21%), Positives = 40/79 (50%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
+ + D L++++ S+ K + +K + + CC ++ +++G D+ V++W +
Sbjct: 318 LATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGGEDDLVQVWSMEDR 377
Query: 697 KCLKPLPAHSDPVSAVHFN 753
K + H+ VS V F+
Sbjct: 378 KVVAWGEGHNSWVSGVAFD 396
Score = 31.9 bits (69), Expect = 0.48
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 371 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS 505
+S +G++L + D L+++W D K GH +S VA+ S
Sbjct: 353 WSMDGKYLLTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDS 397
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 37.9 bits (84), Expect = 0.007
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLK-----GHSNYVFCCN---FNPQ-SNLIVSGSFDE 666
++ S +DK + +W +G+ L T+ G + C + F+ + S I SG +
Sbjct: 57 VVASTGEDKKISLWR-KNGQSLGTVPVTGKDGGDSAEECLSAISFSKKGSRYICSGGTGQ 115
Query: 667 SVRIWDVRTGKCLKPLPAHSDPVSAVHFN 753
V+IWD++ C+K L H+ ++ V +N
Sbjct: 116 IVKIWDLQRKLCIKKLKGHTSTITGVMYN 144
Score = 35.1 bits (77), Expect = 0.051
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
R I S + +K+W+L C+K LKGH++ + +N + + S S + + ++
Sbjct: 106 RYICSGGTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLA 165
Query: 691 TG 696
+G
Sbjct: 166 SG 167
Score = 31.1 bits (67), Expect = 0.84
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Frame = +1
Query: 508 RRLIVSASDDKTLKVWELSSGKCLKT--LKGHSNYVFCCNFNPQS-NLIVSGSFDESVRI 678
R L+V+A DD T+ +W+ ++G+ K LK HS F+P + +I S D+ +
Sbjct: 191 RHLLVTAGDDGTVHLWD-TTGRSPKMSWLKQHSAPTAGVCFSPSNEKIIASVGMDKKLYT 249
Query: 679 WDV---RTGKCLKPLPAHSDPVSAVHF 750
+D R+ C+ A+ P S++ F
Sbjct: 250 YDSGSRRSSSCI----AYEAPFSSLAF 272
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 350 KAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 502
+ +S++ FS G ++ S +++KIW K + GH I+ V ++
Sbjct: 93 ECLSAISFSKKGSRYICSGGTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYN 144
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELS-------SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 672
L++S S D+ V+ + S K + ++ H ++ C++NP + + S D++V
Sbjct: 661 LLLSVSRDRHFSVFSIQRTDNGEVSHKLMAKVEAHKRIIWACSWNPFGHQFATSSRDKTV 720
Query: 673 RIWDVRTGKCLKP---LPAHSDPVSAV 744
+IW V +K LP V+AV
Sbjct: 721 KIWSVENDARIKQILVLPPFGSSVTAV 747
Score = 33.5 bits (73), Expect = 0.16
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Frame = +2
Query: 230 HGGPSASLSVQIH-YHNLLH---SQTSLQWRTNYTLKFTLAGHTKAVSSVKFSPNGEWLA 397
H P+ SLS+ H Y H + +S + N+ ++ +GH AV+ V ++ GE+L
Sbjct: 373 HWSPN-SLSILAHGYGGAFHLWRNVSSSKESENWQMQKVPSGHFAAVTDVTWARTGEYLL 431
Query: 398 SSSADKLIKIWGAY 439
S S D+ +++ A+
Sbjct: 432 SVSQDQTTRVFSAW 445
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +1
Query: 586 LKGHSNYVFCCNFNPQSNLIVSGSFDES-----VRIWDVRTGKCLKPLPAHSDPVSAVHF 750
L GH N +F + + NL+ S +S + +W+V T K + L +HS V+ + F
Sbjct: 596 LYGHGNELFSLCSDHKGNLVASSCKAQSASMAEIWLWEVGTWKAVGRLQSHSLTVTHLEF 655
Query: 751 NRD 759
+ D
Sbjct: 656 SYD 658
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 9/47 (19%)
Frame = +2
Query: 317 YTLKFTLAGHTKAVSSVKFS---------PNGEWLASSSADKLIKIW 430
+T L GHT + S+ FS PN L SSS DK+I+IW
Sbjct: 213 FTSVCELKGHTDWIRSLDFSLPLHTTEEIPNSIMLVSSSQDKVIRIW 259
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8
WD-40 repeats (PF00400) (2 weak)
Length = 1108
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSGSFDESVRIW 681
+++ DDK +KVW++S K T +GH Y C ++ I S + D ++ W
Sbjct: 469 VITCGDDKLIKVWDVSGRKHF-TFEGHDAPVYSICPHYKENIQFIFSTAIDGKIKAW 524
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/60 (23%), Positives = 27/60 (45%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
+I +D T+ ++ + + LKGH + F+ N++VS D + W + T
Sbjct: 876 VIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTALNILVSSGADAQICFWSIDT 935
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 544 LKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
+ +W+ S + TL GHS V +P IV+G+ DE++R W+V
Sbjct: 410 IMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNV 457
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/55 (23%), Positives = 30/55 (54%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS 505
G +V SV+++ G +++ ++ +++W K +T+ GH+ +AW+S
Sbjct: 213 GPNDSVCSVQWTREGSYISIGTSHGQVQVWDGTQCKRVRTMGGHQTRTGVLAWNS 267
Score = 31.9 bits (69), Expect = 0.48
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Frame = +2
Query: 221 HQTHGGP----SASLSVQIHYHNLLHSQTSLQWRTNYTLKFTLAGHTKAVSSVKFSPNGE 388
HQT G S LS N+L Q ++ ++++ K L GH V +K+S +
Sbjct: 256 HQTRTGVLAWNSRILSSGSRDRNIL--QHDIRVQSDFVSK--LVGHKSEVCGLKWSHDDR 311
Query: 389 WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 502
LAS D + +W + + ++ H + + WS
Sbjct: 312 ELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWS 349
Score = 31.5 bits (68), Expect = 0.63
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASS---SADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS 505
L HT AV ++ +SP+ L +S +AD+ I+ W +G +I + ++AWS
Sbjct: 336 LTEHTAAVKAITWSPHQSSLLASGGGTADRCIRFWNTTNGNQLNSIDTGSQ-VCNLAWSK 394
Query: 506 D 508
+
Sbjct: 395 N 395
Score = 31.1 bits (67), Expect = 0.84
Identities = 14/66 (21%), Positives = 32/66 (48%)
Frame = +2
Query: 242 SASLSVQIHYHNLLHSQTSLQWRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLI 421
S +++ + H +Q L + + TL GH+ V + SP+G+ + + + D+ +
Sbjct: 393 SKNVNEIVSTHGYSQNQIMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETL 452
Query: 422 KIWGAY 439
+ W +
Sbjct: 453 RFWNVF 458
>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 296
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/81 (28%), Positives = 34/81 (41%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
IV+AS D ++ ++ +G + L+ N I SG V+IWD R
Sbjct: 9 IVTASADCSILATDVETGAQVAHLENAHEDAVNTLINVTETTIASGDDKGCVKIWDTRQR 68
Query: 697 KCLKPLPAHSDPVSAVHFNRD 759
C AH D +S + F D
Sbjct: 69 SCSHEFNAHEDYISGMTFASD 89
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/81 (28%), Positives = 34/81 (41%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
IV+AS D ++ ++ +G + L+ N I SG V+IWD R
Sbjct: 66 IVTASADCSILATDVETGAQVAHLENAHEDAVNTLINVTETTIASGDDKGCVKIWDTRQR 125
Query: 697 KCLKPLPAHSDPVSAVHFNRD 759
C AH D +S + F D
Sbjct: 126 SCSHEFNAHEDYISGMTFASD 146
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/80 (28%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
Frame = +1
Query: 520 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES-VRIWDVRTG 696
V+A+ + +++ W+L + K + +++ H+ +V ++NP+ I+ + DES + +WD+R
Sbjct: 184 VAATGESSVQFWDLRTMKKVNSIE-HA-HVRGVDYNPKREHILVTAEDESGIHVWDLRKA 241
Query: 697 KC-LKPLPAHSDPVSAVHFN 753
K ++ LP H+ AV N
Sbjct: 242 KVPVQELPGHTHWTWAVRCN 261
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/53 (33%), Positives = 32/53 (60%)
Frame = +2
Query: 350 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
+++ ++++S +G+ S+ DKL+KIW A + T+ K +S VA SSD
Sbjct: 64 ESIRAIRYSTSGKLFVSAGDDKLVKIWSADSWRCLNTVCSEKR-VSAVAISSD 115
Score = 35.1 bits (77), Expect = 0.051
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Frame = +1
Query: 592 GHSNYVFCCNF--NPQ--SNLIVSGSFDESVRIWDVRTGKCL 705
GHS ++ C F P+ ++SGS D +VR+WD+ +G L
Sbjct: 201 GHSEFITCTAFVSTPELTQGYLMSGSGDSTVRLWDITSGSLL 242
Score = 34.7 bits (76), Expect = 0.068
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTL 588
+L VSA DDK +K+W S +CL T+
Sbjct: 76 KLFVSAGDDKLVKIWSADSWRCLNTV 101
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +1
Query: 508 RRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCN--FNPQSNLIVS-GSFDESVRI 678
+R ++S+ D T+K+WE+ SG+ +K G FN ++S V
Sbjct: 230 QRFVLSSGKDSTVKLWEIGSGRMVKEYLGAKRVKLRSQAIFNDTEEFVISIDEASNEVVT 289
Query: 679 WDVRTGKCLKPLPAH 723
WD RT + P++
Sbjct: 290 WDARTADKVAKWPSN 304
Score = 32.3 bits (70), Expect = 0.36
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 580 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
KTL H + V C F+P +G D S+++++V
Sbjct: 25 KTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEV 60
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG 469
TL+ H V +FSP+G + A+ AD IK++ K ++ ISG
Sbjct: 26 TLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEV--PKVKQMISG 69
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/68 (20%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLK--GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
+++S++ D +K ++ S + K ++ V +F+P +++G+ ++DV
Sbjct: 98 ILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEFLLAGTDHPIPHLYDV 157
Query: 688 RTGKCLKP 711
T +C P
Sbjct: 158 NTYQCFLP 165
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +1
Query: 508 RRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCN--FNPQSNLIVS-GSFDESVRI 678
+R ++S+ D T+K+WE+ SG+ +K G FN ++S V
Sbjct: 322 QRFVLSSGKDSTVKLWEIGSGRMVKEYLGAKRVKLRSQAIFNDTEEFVISIDEASNEVVT 381
Query: 679 WDVRTGKCLKPLPAH 723
WD RT + P++
Sbjct: 382 WDARTADKVAKWPSN 396
Score = 32.3 bits (70), Expect = 0.36
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 580 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
KTL H + V C F+P +G D S+++++V
Sbjct: 117 KTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEV 152
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG 469
TL+ H V +FSP+G + A+ AD IK++ K ++ ISG
Sbjct: 118 TLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEV--PKVKQMISG 161
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/68 (20%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLK--GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
+++S++ D +K ++ S + K ++ V +F+P +++G+ ++DV
Sbjct: 190 ILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEFLLAGTDHPIPHLYDV 249
Query: 688 RTGKCLKP 711
T +C P
Sbjct: 250 NTYQCFLP 257
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 37.1 bits (82), Expect = 0.013
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 8/64 (12%)
Frame = +1
Query: 514 LIVSASDDKTLKVW----ELSSGKCLKTLK----GHSNYVFCCNFNPQSNLIVSGSFDES 669
++ S S D T+K+W E C++TL GHS+ V+ +FN + +V+ S D +
Sbjct: 153 VLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSISFNAAGDKMVTCSDDLA 212
Query: 670 VRIW 681
V+IW
Sbjct: 213 VKIW 216
Score = 34.3 bits (75), Expect = 0.090
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 13/93 (13%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGK-----CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 678
L+ + DK++ +WE+ + + L GHS V ++P +++ S S+D +++I
Sbjct: 106 LLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVLWHPTMDVLFSCSYDNTIKI 165
Query: 679 W--DVRTG--KCLKPLP----AHSDPVSAVHFN 753
W + G C++ L HS V ++ FN
Sbjct: 166 WCSEDEDGDYNCVQTLSELNNGHSSTVWSISFN 198
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY---DGKFE--KTISGHKMGISDVAW 499
L GH V SV ++ +G LA+ DK + IW D +F+ ++GH + V W
Sbjct: 88 LRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVLW 147
Score = 33.5 bits (73), Expect = 0.16
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA--YDGKFE--KTISGHKMGISDVAWS 502
L GH++ V V + P + L S S D IKIW + DG + +T+S G S WS
Sbjct: 135 LTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWS 194
Score = 32.7 bits (71), Expect = 0.27
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYDGKFEKTIS-GHKMGISD 490
L GHT V +V ++P + +AS SADK ++IW T GH++G D
Sbjct: 16 LEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSSLTRSWTCKLGHRLGSFD 69
Score = 31.9 bits (69), Expect = 0.48
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +1
Query: 529 SDDKTLKVWE--LSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
S D VWE + + + L+GH + V ++N +L+ + D+SV IW+++
Sbjct: 67 SFDGNTCVWENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQ 122
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
GH+ V S+ F+ G+ + + S D +KIW
Sbjct: 187 GHSSTVWSISFNAAGDKMVTCSDDLAVKIW 216
>At4g21530.1 68417.m03111 transducin family protein / WD-40 repeat
family protein contains 1 WD-40 repeat (PF00400);
similar to anaphase-promoting complex subunit 4
GI:6180011 [Homo sapiens]; supported by EST GB:AU237382
Length = 510
Score = 37.1 bits (82), Expect = 0.013
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF--NPQSNLIVSGSFDESVRIWD 684
+ I +D T+ + ++ +GK L+ LK H V C N+ + QSN SG+F +++
Sbjct: 77 KAIAVGLEDGTISLHDVENGKLLRNLKPHDVAVVCLNWEEDGQSNTDESGNFS----VYE 132
Query: 685 VRTGKCLKPLP 717
RT + P P
Sbjct: 133 DRTSRFFPPAP 143
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +2
Query: 350 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
K V+S+ + P+G+ +A D I + +GK + + H + + + W D
Sbjct: 65 KPVTSLCWRPDGKAIAVGLEDGTISLHDVENGKLLRNLKPHDVAVVCLNWEED 117
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 37.1 bits (82), Expect = 0.013
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKC--------LKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 666
R + +A+ +KVWE+ K + LKGH + V F+P S I++ S D
Sbjct: 252 RFLAAAAFTADVKVWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITASKDG 311
Query: 667 SVRIWDV 687
S+R+W++
Sbjct: 312 SIRVWNI 318
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
L GH AV+ + FSPN E + ++S D I++W
Sbjct: 285 LKGHKSAVTWLCFSPNSEQIITASKDGSIRVW 316
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +2
Query: 344 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 502
H VSSV F PNG +A+S ++ IKIW KFE+ + H +++S
Sbjct: 280 HPGPVSSVAFHPNGHLMATSGKERKIKIWDL--RKFEEVQTIHSFHAKTLSFS 330
Score = 31.9 bits (69), Expect = 0.48
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 541 TLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 690
T+ +W+ +S L ++ H V F+P +L+ + + ++IWD+R
Sbjct: 262 TVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLR 311
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 37.1 bits (82), Expect = 0.013
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Frame = +1
Query: 532 DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGKCLK 708
D VW+L +GK + + H + +FNPQ+ +++ + S D + +WD+R+ K
Sbjct: 326 DYGVFNVWDLRAGKSVFHWELHERRINSIDFNPQNPHVMATSSTDGTACLWDLRSMGAKK 385
Query: 709 PLPA----HSDPVSAVHFN 753
P HS V + +F+
Sbjct: 386 PKTLSTVNHSRAVHSAYFS 404
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 550 VWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
VW+ + + TL GH+ V +P IV+G+ DE++R W+V
Sbjct: 449 VWKYPTMSKIATLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNV 494
Score = 35.5 bits (78), Expect = 0.039
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS 505
G +V SV ++ G LA ++ ++IW A K +T+ GH++ + +AW S
Sbjct: 250 GAEDSVCSVGWALRGTHLAVGTSTGKVQIWDASRCKRTRTMEGHRLRVGALAWGS 304
Score = 35.1 bits (77), Expect = 0.051
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 502
LAGH V +K+S + LAS D + +W + + S H + +AWS
Sbjct: 331 LAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWS 386
Score = 32.3 bits (70), Expect = 0.36
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY 439
TL GHT V + SP+G+ + + + D+ ++ W +
Sbjct: 460 TLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNVF 495
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
L V S K +++W+ S K +T++GH V + S+++ SGS D+S+ D+R
Sbjct: 267 LAVGTSTGK-VQIWDASRCKRTRTMEGHRLRVGALAWG--SSVLSSGSRDKSILQRDIRC 323
Query: 694 GK-CLKPLPAHSDPVSAVHFNRD 759
+ + L H V + ++ D
Sbjct: 324 QEDHVSKLAGHKSEVCGLKWSYD 346
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 35.9 bits (79), Expect = 0.029
Identities = 17/79 (21%), Positives = 39/79 (49%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
+ + D L++++ + K + K + + CC+++ I++G D+ V++W +
Sbjct: 318 LATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGGEDDLVQVWSMEDR 377
Query: 697 KCLKPLPAHSDPVSAVHFN 753
K + H+ VS V F+
Sbjct: 378 KVVAWGEGHNSWVSGVAFD 396
Score = 31.9 bits (69), Expect = 0.48
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 353 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
A+ +S +G+++ + D L+++W D K GH +S VA+ S+
Sbjct: 347 ALLCCSWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSN 398
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 35.9 bits (79), Expect = 0.029
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSG----KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 684
I D ++++W L G + K H++ + F+ +++S SFD S+++WD
Sbjct: 342 IAGGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFDGSLKVWD 401
Query: 685 VRTGK 699
+R K
Sbjct: 402 LRQMK 406
Score = 35.5 bits (78), Expect = 0.039
Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Frame = +1
Query: 508 RRLIVSASDDKTLKVWE----LSSGKCLKTLKGHSNY--VFCCNFNPQSNLIVSGSFDES 669
+ ++++S+D +L++W+ LS + +K V C ++ I G D S
Sbjct: 291 KETVLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCAWDRDGKRIAGGVGDGS 350
Query: 670 VRIWDVRTGKCLKP----LPAHSDPVSAVHFNRD 759
++IW ++ G +P AH+D +++V F+ D
Sbjct: 351 IQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSD 384
Score = 35.1 bits (77), Expect = 0.051
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGK-CLKTLKGHSNYVFCCN--FNPQSNLIVSGS 657
R+++S S D +LKVW+L K LK +G NY N F+P +I++G+
Sbjct: 386 RILLSRSFDGSLKVWDLRQMKEALKVFEGLPNYYPQTNVAFSPDEQIILTGT 437
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 344 HTKAVSSVKFSPNGEWLASSSADKLIKIW 430
HT ++SVKFS +G L S S D +K+W
Sbjct: 372 HTDDITSVKFSSDGRILLSRSFDGSLKVW 400
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 586 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 684
LKGH+ V + ++SGS+D +VR++D
Sbjct: 173 LKGHTKIVSSLAVDSAGARVLSGSYDYTVRMYD 205
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 35.5 bits (78), Expect = 0.039
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVR 690
SA DD L +W+L + + +K H + +FNP + ++ + S D +V ++D+R
Sbjct: 236 SAGDDCQLVIWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLR 292
Score = 31.9 bits (69), Expect = 0.48
Identities = 20/86 (23%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTL------KGHSNYVFCCNFNPQS-NLIVSGSFDESVR 675
++S S D+ + +W++S+ K L +GH + + ++ ++ N+ S D +
Sbjct: 185 LLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLV 244
Query: 676 IWDVRTGKCLKPLPAHSDPVSAVHFN 753
IWD+RT + + H ++ + FN
Sbjct: 245 IWDLRTNQMQHQVKVHEREINYLSFN 270
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 35.5 bits (78), Expect = 0.039
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
L+ DD ++ + LSS K + L+GH + C F+ N++VS D + +W ++
Sbjct: 483 LLAVGLDDGSIFIHCLSSRKVKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLWSTKS 542
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 35.1 bits (77), Expect = 0.051
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +2
Query: 323 LKFTLAGHTKAVSSVKFS---PNGEWLASSSADKLIKIWGAY 439
L +++ GH AVS V FS G +L S DK +KIW +
Sbjct: 240 LDYSVGGHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF 281
Score = 31.9 bits (69), Expect = 0.48
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +1
Query: 574 CLK-TLKGHSNYVFCCNFN---PQSNLIVSGSFDESVRIWDVRTGKCLKP 711
CL ++ GH++ V C F+ + ++SG D++V+IWD KCL P
Sbjct: 239 CLDYSVGGHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD--CFKCLDP 286
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 35.1 bits (77), Expect = 0.051
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +2
Query: 323 LKFTLAGHTKAVSSVKFS---PNGEWLASSSADKLIKIWGAY 439
L +++ GH AVS V FS G +L S DK +KIW +
Sbjct: 266 LDYSVGGHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF 307
Score = 31.9 bits (69), Expect = 0.48
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +1
Query: 574 CLK-TLKGHSNYVFCCNFN---PQSNLIVSGSFDESVRIWDVRTGKCLKP 711
CL ++ GH++ V C F+ + ++SG D++V+IWD KCL P
Sbjct: 265 CLDYSVGGHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD--CFKCLDP 312
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 338 AGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYDGKFEKTI 463
AGHT SSV+F P W + + D + +W G+ +K I
Sbjct: 145 AGHTSICSSVQFIPWRPWEVITGGLDSKLVLWDFSKGRSQKII 187
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 34.7 bits (76), Expect = 0.068
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSG-KCLK---TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
L+ + + D ++ VW +S C +L GH+ V +N + SG+ D S+++W
Sbjct: 235 LLFAGTQDGSILVWRYNSTTSCFDPAASLLGHTLAVVSLYVG--ANRLYSGAMDNSIKVW 292
Query: 682 DVRTGKCLKPLPAHSDPVSAV 744
+ +C++ L H+ V ++
Sbjct: 293 SLDNLQCIQTLTEHTSVVMSL 313
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +1
Query: 544 LKVWELSSGKCLKT-LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 702
L W L T L GH V S+ + + S DE+VRIWD +G+C
Sbjct: 125 LHCWSKGDSFSLLTQLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQC 178
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +2
Query: 314 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKMG--I 484
+++L L GH K V+ + + L ++S D+ ++IW G+ ++ G ++G I
Sbjct: 133 SFSLLTQLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLNLGGEVGCII 192
Query: 485 SDVAW 499
S+ W
Sbjct: 193 SEGPW 197
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/24 (37%), Positives = 18/24 (75%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTL 588
+ +AS D+T+++W+ +SG+C L
Sbjct: 159 LYTASKDETVRIWDCASGQCTGVL 182
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 34.7 bits (76), Expect = 0.068
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +1
Query: 634 SNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAV 744
S++++SGS D ++RIWD+ +G + + H PV +
Sbjct: 549 SHVLISGSMDCTIRIWDLESGNVIMIMHHHVAPVRQI 585
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 347 TKAVSSVKFSPNGEWLASSSADKLIKIW 430
T A+S++ FSP+GE L + S + L+ W
Sbjct: 1317 TTAISALSFSPDGEGLVAFSENGLMIRW 1344
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 34.3 bits (75), Expect = 0.090
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
T GHT+ V +K+S +G+ LAS D ++ IW
Sbjct: 231 TYVGHTEEVCGLKWSESGKKLASGGNDNVVHIW 263
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +2
Query: 272 HNLLHSQTSLQWRTNYTLKFT-LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 448
H +Q +L W+ +K L GHT V + SP+G +AS++ D+ +++W + G+
Sbjct: 347 HGFTQNQLTL-WKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVF-GE 404
Query: 449 FEKT 460
KT
Sbjct: 405 PPKT 408
Score = 32.3 bits (70), Expect = 0.36
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +1
Query: 472 QNGDQ*CGMVL*R--RLIVSASD--DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 639
+ G Q C ++ + R ++SA L +W+ S + L GH++ V +P
Sbjct: 326 ETGSQVCSLLWSKSERELLSAHGFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGC 385
Query: 640 LIVSGSFDESVRIWDV 687
+ S + DE++R+W+V
Sbjct: 386 TVASAAGDETLRLWNV 401
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 34.3 bits (75), Expect = 0.090
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
T GHT+ V +K+S +G+ LAS D ++ IW
Sbjct: 261 TYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIW 293
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 272 HNLLHSQTSLQWRTNYTLKFT-LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY 439
H +Q +L W+ +K L GHT V + SP+G +AS++ D+ ++ W +
Sbjct: 377 HGFTQNQLTL-WKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNVF 432
Score = 32.7 bits (71), Expect = 0.27
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Frame = +1
Query: 517 IVSASDDKTLKVWELS------SGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSF--DES 669
+ S +D + +W+ S + + L L+ H++ V + P Q+NL+ +G D +
Sbjct: 281 LASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRT 340
Query: 670 VRIWDVRTGKCLKPLPAHSDPVS 738
++ W+ TG CL + S S
Sbjct: 341 IKFWNTHTGACLNSVDTGSQVCS 363
Score = 32.7 bits (71), Expect = 0.27
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +1
Query: 544 LKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV----RTGKCLKP 711
L +W+ S + L GH++ V +P + S + DE++R W+V T K P
Sbjct: 384 LTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNVFGVPETAKKAAP 443
Query: 712 LPAHSDPVSAVHFNR 756
A S+P S H NR
Sbjct: 444 -KAVSEPFS--HVNR 455
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/51 (21%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +2
Query: 356 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGISDVAWSS 505
V+S+ ++P+G +A + +++W + + +T+ GH+ + +AW++
Sbjct: 185 VTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNN 235
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 34.3 bits (75), Expect = 0.090
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
T GHT+ V +K+S +G+ LAS D ++ IW
Sbjct: 251 TYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIW 283
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 272 HNLLHSQTSLQWRTNYTLKFT-LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY 439
H +Q +L W+ +K L GHT V + SP+G +AS++ D+ ++ W +
Sbjct: 367 HGFTQNQLTL-WKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNVF 422
Score = 32.7 bits (71), Expect = 0.27
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Frame = +1
Query: 517 IVSASDDKTLKVWELS------SGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSF--DES 669
+ S +D + +W+ S + + L L+ H++ V + P Q+NL+ +G D +
Sbjct: 271 LASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRT 330
Query: 670 VRIWDVRTGKCLKPLPAHSDPVS 738
++ W+ TG CL + S S
Sbjct: 331 IKFWNTHTGACLNSVDTGSQVCS 353
Score = 31.5 bits (68), Expect = 0.63
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +1
Query: 544 LKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV----RTGKCLKP 711
L +W+ S + L GH++ V +P + S + DE++R W+V T K P
Sbjct: 374 LTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNVFGVPETAKKAAP 433
Query: 712 LPAHSDPVSAVHFNR 756
A ++P S H NR
Sbjct: 434 -KAVAEPFS--HVNR 445
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/51 (21%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +2
Query: 356 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGISDVAWSS 505
V+S+ ++P+G +A + +++W + + +T+ GH+ + +AW++
Sbjct: 175 VTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNN 225
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
T GHT+ V +K+S +G+ LAS D ++ IW
Sbjct: 213 TYLGHTEEVCGLKWSESGKKLASGGNDNVVHIW 245
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +2
Query: 272 HNLLHSQTSLQWRTNYTLKFT-LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 448
H +Q +L W+ +K L GHT V + SP+G +AS++ D+ +++W + G+
Sbjct: 330 HGFTQNQLTL-WKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVF-GE 387
Query: 449 FEKT 460
KT
Sbjct: 388 PPKT 391
Score = 31.9 bits (69), Expect = 0.48
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 544 LKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
L +W+ S + L GH++ V +P + S + DE++R+W+V
Sbjct: 337 LTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNV 384
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +2
Query: 272 HNLLHSQTSLQWRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF 451
H +Q +L + + L GHT V + SPNG +AS++ D+ +++W + G+
Sbjct: 361 HGFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVF-GEP 419
Query: 452 EKT 460
KT
Sbjct: 420 PKT 422
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 544 LKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
L +W+ S + L GH++ V +P + S + DE++R+W+V
Sbjct: 368 LTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNV 415
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
T GHT+ V +K+S +G+ LAS ++ IW
Sbjct: 244 TYLGHTEEVCGLKWSESGKKLASGGNYNVVHIW 276
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +2
Query: 272 HNLLHSQTSLQWRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF 451
H +Q +L + + L GHT V + SPNG +AS++ D+ +++W + G+
Sbjct: 363 HGFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVF-GEP 421
Query: 452 EKT 460
KT
Sbjct: 422 PKT 424
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 544 LKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
L +W+ S + L GH++ V +P + S + DE++R+W+V
Sbjct: 370 LTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNV 417
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
T GHT+ V +K+S +G AS D ++ IW
Sbjct: 247 TYLGHTEEVCGLKWSESGNKQASGGNDNVVHIW 279
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
T+ GH+K VS VKF + L SSS D +K+W
Sbjct: 699 TMIGHSKTVSYVKF-VDSSTLVSSSTDNTLKLW 730
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Frame = +1
Query: 517 IVSASDDKTLKVWELS---SG---KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 678
+VS+S D TLK+W+LS SG L + GH+N + I +GS V +
Sbjct: 718 LVSSSTDNTLKLWDLSMSASGINESPLHSFTGHTNLKNFVGLSVSDGYIATGSETNEVFV 777
Query: 679 W 681
+
Sbjct: 778 Y 778
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 33.5 bits (73), Expect = 0.16
Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = +1
Query: 511 RLIVSASDDK--TLKVWELSSGKC-LKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRI 678
+++V++ DD TLK+W++ + ++ GH V + P S+ +++ + D
Sbjct: 231 QIMVASDDDSSPTLKLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTIC 290
Query: 679 WDVRTGKCLKPLPAHSDPVSAVHF 750
WD T + + LPA ++ VH+
Sbjct: 291 WDTNTAEIVAELPAGNNWNFDVHW 314
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 33.5 bits (73), Expect = 0.16
Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = +1
Query: 511 RLIVSASDDK--TLKVWELSSGKC-LKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRI 678
+++V++ DD TLK+W++ + ++ GH V + P S+ +++ + D
Sbjct: 231 QIMVASDDDSSPTLKLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTIC 290
Query: 679 WDVRTGKCLKPLPAHSDPVSAVHF 750
WD T + + LPA ++ VH+
Sbjct: 291 WDTNTAEIVAELPAGNNWNFDVHW 314
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 580 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
K L+ H V +FN + ++++SGS D V +WD + G
Sbjct: 53 KKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLG 91
Score = 32.7 bits (71), Expect = 0.27
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKC-LKTLKGHSNYVFCCNFNPQSN--LIVSGSFDESVR 675
+++S SDD+ + +W+ G L GH+N VF F P S+ IV+ + D VR
Sbjct: 73 VLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMPFSDDRTIVTCAADGMVR 129
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGH 472
L GH V++V+F+ G+ L S S D+ I +W G + + SGH
Sbjct: 51 LNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGH 97
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +1
Query: 514 LIVSASDDKTLKVWE-LSSGKCLKTLKGHSNYVFCCNFNP--QSNLIVSGSFDESVRIWD 684
++VS SDD+ + +W LS + L GH VF F P I++ D VR+
Sbjct: 69 VLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFTDDRTIITSGADGQVRLGQ 128
Query: 685 V 687
+
Sbjct: 129 I 129
Score = 32.3 bits (70), Expect = 0.36
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +1
Query: 586 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPA-HSDPVSAVHF 750
L GH V FN +++VSGS D + +W+ +G P+ H + V F
Sbjct: 51 LNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKF 106
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIWG-AYDGKFEK--TISGHKMGISDVAWS 502
GH V V+ G+ +A++S+D IKI G + +G ++ T++GH+ + +VAW+
Sbjct: 9 GHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVWEVAWA 65
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = +2
Query: 392 LASSSADKLIKIWGAYDGKFE----KTISGHKMGISDVAWSSDAG 514
LAS D +K+W +G ++ + H + DVAW+ + G
Sbjct: 179 LASGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPNLG 223
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVR 690
L SA +D L +W+ + + +K H V +FNP + ++ + S D +V ++D+R
Sbjct: 232 LFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLR 291
Score = 31.5 bits (68), Expect = 0.63
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Frame = +2
Query: 335 LAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTIS------GHKMGISDV 493
L GH K + +SP E +L S S D+ I +W +K ++ GH+ I+DV
Sbjct: 164 LVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADV 223
Query: 494 AW 499
+W
Sbjct: 224 SW 225
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 696
I + +D + ++ K + + HSN+V C ++P ++ S D+ I+D +TG
Sbjct: 24 IATCGEDFLVNFYDGPPFKFHSSHREHSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTG 83
Query: 697 KCLKPLPA---HSDPVSAVHFNRD 759
+ L + H + AV ++ D
Sbjct: 84 DKVGELASEDGHKGSIYAVSWSPD 107
Score = 32.7 bits (71), Expect = 0.27
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Frame = +2
Query: 344 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI------SGHKMGISDVAWSS 505
H+ V+ +++SP+G + S+DK I YDGK + GHK I V+WS
Sbjct: 50 HSNFVNCIRYSPDGTKFITVSSDKKGMI---YDGKTGDKVGELASEDGHKGSIYAVSWSP 106
Query: 506 DA 511
D+
Sbjct: 107 DS 108
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/59 (23%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +1
Query: 520 VSASDDKTLKVWELSSGKCLKTLK---GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 687
++ S DK +++ +G + L GH ++ +++P S +++ S D+S ++W+V
Sbjct: 67 ITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSKRVLTVSADKSAKVWEV 125
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIWG-AYDGKFEKTI 463
GH ++ +V +SP+ + + + SADK K+W A DG I
Sbjct: 94 GHKGSIYAVSWSPDSKRVLTVSADKSAKVWEVAEDGTIGSVI 135
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 31.5 bits (68), Expect = 0.63
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 580 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 693
K L H V +FN ++++SGS D V +WD +T
Sbjct: 49 KKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQT 86
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 305 WRTNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 466
W+ L L H AV+ + S + + S+S D +K+W + K EK IS
Sbjct: 1067 WKPRGVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWDS--RKLEKDIS 1118
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 681
R++ +A DD ++++ +S+ + L ++L S ++P + I SGS D +R W
Sbjct: 166 RILAAACDDGCVRLYRISNLEKLTYYRSLPRVSGRALSVTWSPDAKRIFSGSSDGLIRCW 225
Query: 682 D 684
D
Sbjct: 226 D 226
>At3g26480.1 68416.m03301 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (5 copies, 2 below cutoff); related to
LACK protective antigen (GI:13625467) [Leishmania
donovani]
Length = 764
Score = 31.5 bits (68), Expect = 0.63
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +1
Query: 541 TLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS----GSFDESVRIWDVRTGKCLK 708
T+ V+ +++G + +L+ H+ V +P S+ VS S D +RIW+ K LK
Sbjct: 29 TVSVYSVATGLKITSLEDHTAPVTSVIVDPSSDETVSYCWTSSLDGKIRIWEFSAPKLLK 88
Query: 709 PLPAH 723
H
Sbjct: 89 IFDTH 93
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +1
Query: 511 RLIVSASDDKTLKVWELSSGKCLKTLKG-HSNYVFCCNFNPQSN-LIVSGSFDESVRIWD 684
+L +++ K + ++++ G L+ H ++ F+ S L + SFD+ V++WD
Sbjct: 553 QLFLASGYSKDVALYDIGRGTRLQVFANMHQEHINVVKFSNHSPFLFATSSFDKDVKLWD 612
Query: 685 VR 690
+R
Sbjct: 613 LR 614
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 31.1 bits (67), Expect = 0.84
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +2
Query: 341 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD---GKFEKTISGHKMGISDVAWS 502
GH+ + V G+ +A++S+D IKI G + + T++GH+ + VAW+
Sbjct: 9 GHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVWQVAWA 65
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = +2
Query: 392 LASSSADKLIKIWGAYDGKFE----KTISGHKMGISDVAWSSDAG 514
LAS D +K+W +G ++ ++ H + DVAW+ + G
Sbjct: 179 LASGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLG 223
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/82 (20%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Frame = +1
Query: 514 LIVSASDDKTLKVWEL--SSGKCL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 678
++V+ S D ++ WE+ S G K H V C + + +G D+ ++
Sbjct: 40 ILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSAWKDDGTTVFTGGCDKQAKM 99
Query: 679 WDVRTGKCLKPLPAHSDPVSAV 744
W + +G + H P + +
Sbjct: 100 WPLLSGAQPSTVAMHDAPFNQI 121
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/52 (23%), Positives = 22/52 (42%)
Frame = +2
Query: 344 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW 499
H + V + +G + + DK K+W G T++ H + +AW
Sbjct: 72 HDQPVLCSAWKDDGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAW 123
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 371 FSPNGEWLASSSADK---LIKIWGAYDGKFEKTISGHKMGISDVAW 499
FS +GEW+ SA K I IW G K + G K + D+AW
Sbjct: 300 FSGDGEWVVGGSACKGEHKIYIWDR-AGHLVKILEGPKEALIDLAW 344
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 353 AVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTI 463
A++SV +S G L S+ADK + +W G K +TI
Sbjct: 69 AITSVSWSKYGHRLLVSAADKSLTLWDVSTGEKIARTI 106
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +1
Query: 571 KCLKTLKGHSNYVFCCN---FNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSA 741
KC + + + V+ N F+P +G D V IWD K L + +SA
Sbjct: 229 KCHRKSEAGRDIVYPVNSIAFHPIYGTFATGGCDGFVNIWDGNNKKRLYQYSKYPTSISA 288
Query: 742 VHFNRD 759
+ F+RD
Sbjct: 289 LSFSRD 294
>At5g65750.1 68418.m08274 2-oxoglutarate dehydrogenase E1 component,
putative / oxoglutarate decarboxylase, putative /
alpha-ketoglutaric dehydrogenase, putative similar to
SP|P20967 2-oxoglutarate dehydrogenase E1 component,
mitochondrial precursor (EC 1.2.4.2)
(Alpha-ketoglutarate dehydrogenase) {Saccharomyces
cerevisiae}; contains Pfam profiles PF02779:
Transketolase, pyridine binding domain, PF00676:
Dehydrogenase E1 component
Length = 1025
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 20 CSFKIYVELNEKKRLREVQNFLICR 94
CS K+Y EL+E+++ E ++ ICR
Sbjct: 901 CSGKVYYELDEERKKSETKDVAICR 925
>At1g69400.2 68414.m07968 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 272
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/61 (21%), Positives = 32/61 (52%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 702
++ D ++ ++L++G + T+ H + ++ + ++S FDE ++ WD R +
Sbjct: 70 TSGSDGFIRRYDLNAGT-VDTIGRHDDISTSIVYSYEKGEVISTGFDEKIKFWDTRQRES 128
Query: 703 L 705
L
Sbjct: 129 L 129
>At1g69400.1 68414.m07969 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 314
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/61 (21%), Positives = 32/61 (52%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 702
++ D ++ ++L++G + T+ H + ++ + ++S FDE ++ WD R +
Sbjct: 70 TSGSDGFIRRYDLNAGT-VDTIGRHDDISTSIVYSYEKGEVISTGFDEKIKFWDTRQRES 128
Query: 703 L 705
L
Sbjct: 129 L 129
>At1g58227.1 68414.m06616 hypothetical protein
Length = 1323
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 35 YVELNEKKRLREVQNFLICRNFHLLCYS 118
YV LN K++ V L+C+ +H +C S
Sbjct: 514 YVSLNLKRQCVNVHTNLVCKKWHFICVS 541
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +1
Query: 571 KCLKTLKGHSNYVFCCN---FNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSA 741
KC + + + V+ N F+P SG D V IWD K L + ++A
Sbjct: 228 KCHRKSEDGRDIVYPVNAIAFHPIYGTFASGGCDGFVNIWDGNNKKRLYQYSKYPTSIAA 287
Query: 742 VHFNRD 759
+ F+RD
Sbjct: 288 LSFSRD 293
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +2
Query: 356 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDAG*LSV 526
V+++ F P AS D + IW + K S + I+ +++S D G L+V
Sbjct: 243 VNAIAFHPIYGTFASGGCDGFVNIWDGNNKKRLYQYSKYPTSIAALSFSRDGGLLAV 299
>At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
damage-specific DNA binding protein 2 (GI:10798819)
[Homo sapiens]
Length = 557
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 586 LKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWD 684
++ HS V C F+P ++N+++SG + +WD
Sbjct: 167 IRYHSRRVTCLEFHPTKNNILLSGDKKGQIGVWD 200
>At2g46560.1 68415.m05808 transducin family protein / WD-40 repeat
family protein similar to CPY (GI:3096961) {Chironomus
thummi}; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies, 3 weak)|9780477|gb|BE522499.1|BE522499
Length = 2471
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 628 PQSNLIVSGSFDESVRIWDVRTGKCLKPLP 717
P+++L ++GS D V++WD + K + P
Sbjct: 2385 PRTSLFLTGSKDGEVKLWDAKAAKLIHHWP 2414
>At1g64350.1 68414.m07292 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to nuclear pore protein SEH1 (SP:P53011)
[Saccharomyces cerevisiae]
Length = 326
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +2
Query: 332 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 430
+L+GH V +++ +G LAS+ +D ++K+W
Sbjct: 275 SLSGHQGEVWQMEWDMSGMTLASTGSDGMVKLW 307
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSS-GKCLKTLKGHSNY----VFCCNFNPQ-SNLIVSGSFDESVRI 678
+ S +DD T+ +W+L++ K LKG +Y + ++N +++ S S + + I
Sbjct: 131 LASGADDGTVCIWDLANPSKPSHYLKGTGSYMQSEISSLSWNKGFQHVLASTSHNGTTVI 190
Query: 679 WDVRTGKCLKPL 714
WDV K + L
Sbjct: 191 WDVNNEKIITDL 202
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +1
Query: 523 SASDDKTLKVWELSSGKCL-KTLKGHSNYVFC-CNFNP-QSNLIVSGSFDESVRIWDVR 690
S SDD T+++W+ +G L +T++ C F+P + I G D + ++D+R
Sbjct: 185 SGSDDGTVQMWDPRNGGTLEETVRPGGGAAICSVEFDPFGGSSIAVGCADRNAYVYDIR 243
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +2
Query: 347 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 508
TK VSS+ SP+G+ L ++S +K + D K + +GH + VA++ D
Sbjct: 158 TKTVSSLCVSPDGKILVTASTQ--LKTFNCSDLKKIQKFTGHPGVVRCVAFTED 209
>At3g52030.1 68416.m05707 F-box family protein / WD-40 repeat family
protein
Length = 454
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/57 (26%), Positives = 32/57 (56%)
Frame = +1
Query: 589 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRD 759
+ HS+ V C + L+++G D+ +R+W +++ KC++ + D S + F+ D
Sbjct: 115 EAHSHRVSQCRM--KKGLLLTGVGDKVMRLWSLKSYKCMEEY-SLPDASSLIDFDFD 168
>At5g51270.1 68418.m06356 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain
Length = 819
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/72 (25%), Positives = 31/72 (43%)
Frame = -1
Query: 254 ISWLKGHREFDVQQGGLARDLAAPCFNYRRTTLYVFVTPHNHYYTQNNKVNESFDKLKSF 75
+SW R+FD ++ ++ + F Y VTP HY+T N KL++
Sbjct: 303 VSWNPQFRDFDERKDAMSS--MSSNFEYGNV-----VTPLGHYFTDNQDTLNEISKLRAE 355
Query: 74 VLRAVSFFHLVQ 39
+ A + + Q
Sbjct: 356 LRHAHEMYAVAQ 367
>At5g19920.1 68418.m02370 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TipD protein (SP:O15736, PIR:T08602)
[Dictyostelium discoideum]; related to WD-repeat protein
RBAP1 (GI:9716495) [Zea mays]
Length = 656
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +2
Query: 344 HTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTI--SGHKMGISDVAWSSD 508
HTK + S+ SP N E A+S+ D + W + T+ + +++ + W+ D
Sbjct: 337 HTKRMRSLALSPSNRELFATSALDGAVHFWKLQSDRSTATLFKTVNRVAVDQKKWAED 394
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 28.3 bits (60), Expect = 5.9
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNY-VFCCNF--NPQSN----LIVSGSFDESVR 675
+VS+S D T+K+W+ + L L+ H + V F +P+ LI G + ++
Sbjct: 337 LVSSSVDGTIKIWQDRKAQPLVVLRPHDGHPVSSATFVTSPERPDHIILITGGPLNREMK 396
Query: 676 IWDVRTGKCLKPLPAHSD 729
IW V G+ LPA ++
Sbjct: 397 IW-VSAGEEGWLLPADAE 413
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 28.3 bits (60), Expect = 5.9
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Frame = +1
Query: 517 IVSASDDKTLKVWELSSGKCLKTLKGHSNY-VFCCNF--NPQSN----LIVSGSFDESVR 675
+VS+S D T+K+W+ + L L+ H + V F +P+ LI G + ++
Sbjct: 372 LVSSSVDGTIKIWQDRKAQPLVVLRPHDGHPVSSATFVTSPERPDHIILITGGPLNREMK 431
Query: 676 IWDVRTGKCLKPLPAHSD 729
IW V G+ LPA ++
Sbjct: 432 IW-VSAGEEGWLLPADAE 448
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 622 FNPQSNLIVSGSFDESVRIWDVRTGKCL 705
F+ ++S D V +WD+RT KCL
Sbjct: 382 FSEDGKHLLSSGGDGQVYVWDLRTMKCL 409
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Frame = +1
Query: 514 LIVSASDDKTLKVWELSS------GKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESV 672
LI++ S D T+++++ G + +GH V C ++P +S++ S + D +
Sbjct: 352 LILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLL 411
Query: 673 RIWD 684
IWD
Sbjct: 412 NIWD 415
>At1g45160.1 68414.m05177 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 1067
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 196 SRARPPCCTSNSRWPFSQLIGPNSLSQSA-PQSNKSSVANELYPQIHSRW 342
S PPC S FS +GP Q+ P+ + + EL +HSR+
Sbjct: 122 SETNPPCSKSMGIKSFSHELGPRGGVQTPYPRPHSYNDLKELLGSLHSRF 171
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,574,104
Number of Sequences: 28952
Number of extensions: 350192
Number of successful extensions: 2649
Number of sequences better than 10.0: 231
Number of HSP's better than 10.0 without gapping: 1217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2469
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1702303248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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