Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20704
(728 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70311-11|CAA94380.1| 484|Caenorhabditis elegans Hypothetical p... 119 2e-27
Z70306-6|CAA94326.1| 484|Caenorhabditis elegans Hypothetical pr... 119 2e-27
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 33 0.21
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 33 0.21
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 33 0.21
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 33 0.21
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 33 0.21
U64847-8|AAQ91904.1| 558|Caenorhabditis elegans Acyltransferase... 30 1.5
U64847-7|AAB04876.1| 718|Caenorhabditis elegans Acyltransferase... 30 1.5
U97003-1|AAB52270.2| 527|Caenorhabditis elegans Udp-glucuronosy... 28 7.9
U15167-1|AAB66360.1| 445|Caenorhabditis elegans serotonin recep... 28 7.9
AC084154-13|AAK29875.2| 445|Caenorhabditis elegans Serotonin/oc... 28 7.9
>Z70311-11|CAA94380.1| 484|Caenorhabditis elegans Hypothetical
protein T25B9.9 protein.
Length = 484
Score = 119 bits (287), Expect = 2e-27
Identities = 49/62 (79%), Positives = 54/62 (87%)
Frame = +2
Query: 509 GPSLMPGGHPAAWPHIKEIFQAICAKANDEPCCDWVREDGAGHFVKMVHNGIEYGDMQLI 688
GPSLMPGG+P AWPH+K+IFQ I AK+N EPCCDWV G+GHFVKMVHNGIEYGDMQLI
Sbjct: 138 GPSLMPGGNPKAWPHLKDIFQKIAAKSNGEPCCDWVGNAGSGHFVKMVHNGIEYGDMQLI 197
Query: 689 CE 694
E
Sbjct: 198 AE 199
Score = 101 bits (241), Expect = 7e-22
Identities = 43/82 (52%), Positives = 64/82 (78%)
Frame = +3
Query: 261 ATSLDDMVSKLKRPRKIVLLVKAGFAVDEFVKKLIPLLSKGDIIIDGGNSQYLDTQKWCK 440
A S+++M KLKRPR++++L+KAG VD + ++P L +GDIIIDGGNS+Y D+ + +
Sbjct: 55 AHSIEEMCKKLKRPRRVMMLIKAGTPVDMMIDAIVPHLEEGDIIIDGGNSEYTDSNRRSE 114
Query: 441 ELSGTGILYVGMGVSGGEDGAR 506
+L+ GI++VG GVSGGE+GAR
Sbjct: 115 QLAAKGIMFVGCGVSGGEEGAR 136
Score = 91.1 bits (216), Expect = 7e-19
Identities = 41/52 (78%), Positives = 47/52 (90%)
Frame = +1
Query: 106 EADIALIGLAVMGQNLILNMNDKGYVVCAFNRTVSKVEEFLKNEAKGTKVLG 261
EADIA+IGLAVMGQNLILNMND G+ VCAFNRTV V++FL NEAKGTK++G
Sbjct: 3 EADIAVIGLAVMGQNLILNMNDHGFTVCAFNRTVKLVDDFLANEAKGTKIIG 54
>Z70306-6|CAA94326.1| 484|Caenorhabditis elegans Hypothetical
protein T25B9.9 protein.
Length = 484
Score = 119 bits (287), Expect = 2e-27
Identities = 49/62 (79%), Positives = 54/62 (87%)
Frame = +2
Query: 509 GPSLMPGGHPAAWPHIKEIFQAICAKANDEPCCDWVREDGAGHFVKMVHNGIEYGDMQLI 688
GPSLMPGG+P AWPH+K+IFQ I AK+N EPCCDWV G+GHFVKMVHNGIEYGDMQLI
Sbjct: 138 GPSLMPGGNPKAWPHLKDIFQKIAAKSNGEPCCDWVGNAGSGHFVKMVHNGIEYGDMQLI 197
Query: 689 CE 694
E
Sbjct: 198 AE 199
Score = 101 bits (241), Expect = 7e-22
Identities = 43/82 (52%), Positives = 64/82 (78%)
Frame = +3
Query: 261 ATSLDDMVSKLKRPRKIVLLVKAGFAVDEFVKKLIPLLSKGDIIIDGGNSQYLDTQKWCK 440
A S+++M KLKRPR++++L+KAG VD + ++P L +GDIIIDGGNS+Y D+ + +
Sbjct: 55 AHSIEEMCKKLKRPRRVMMLIKAGTPVDMMIDAIVPHLEEGDIIIDGGNSEYTDSNRRSE 114
Query: 441 ELSGTGILYVGMGVSGGEDGAR 506
+L+ GI++VG GVSGGE+GAR
Sbjct: 115 QLAAKGIMFVGCGVSGGEEGAR 136
Score = 91.1 bits (216), Expect = 7e-19
Identities = 41/52 (78%), Positives = 47/52 (90%)
Frame = +1
Query: 106 EADIALIGLAVMGQNLILNMNDKGYVVCAFNRTVSKVEEFLKNEAKGTKVLG 261
EADIA+IGLAVMGQNLILNMND G+ VCAFNRTV V++FL NEAKGTK++G
Sbjct: 3 EADIAVIGLAVMGQNLILNMNDHGFTVCAFNRTVKLVDDFLANEAKGTKIIG 54
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 318 LVKAGFAVDEFVKKLIPLLSKGDII-IDGGNSQYLDTQKWCKELSGT 455
++K G +DE ++KL+ ++ K D+ I N Q DT KW EL +
Sbjct: 1004 ILKNGKPIDEEMRKLVEVIIKDDVAEIVFKNPQLADTGKWALELGNS 1050
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 318 LVKAGFAVDEFVKKLIPLLSKGDII-IDGGNSQYLDTQKWCKELSGT 455
++K G +DE ++KL+ ++ K D+ I N Q DT KW EL +
Sbjct: 1533 ILKNGKPIDEEMRKLVEVIIKDDVAEIVFKNPQLADTGKWALELGNS 1579
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 318 LVKAGFAVDEFVKKLIPLLSKGDII-IDGGNSQYLDTQKWCKELSGT 455
++K G +DE ++KL+ ++ K D+ I N Q DT KW EL +
Sbjct: 1214 ILKNGKPIDEEMRKLVEVIIKDDVAEIVFKNPQLADTGKWALELGNS 1260
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 318 LVKAGFAVDEFVKKLIPLLSKGDII-IDGGNSQYLDTQKWCKELSGT 455
++K G +DE ++KL+ ++ K D+ I N Q DT KW EL +
Sbjct: 1004 ILKNGKPIDEEMRKLVEVIIKDDVAEIVFKNPQLADTGKWALELGNS 1050
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 318 LVKAGFAVDEFVKKLIPLLSKGDII-IDGGNSQYLDTQKWCKELSGT 455
++K G +DE ++KL+ ++ K D+ I N Q DT KW EL +
Sbjct: 1533 ILKNGKPIDEEMRKLVEVIIKDDVAEIVFKNPQLADTGKWALELGNS 1579
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 318 LVKAGFAVDEFVKKLIPLLSKGDII-IDGGNSQYLDTQKWCKELSGT 455
++K G +DE ++KL+ ++ K D+ I N Q DT KW EL +
Sbjct: 1214 ILKNGKPIDEEMRKLVEVIIKDDVAEIVFKNPQLADTGKWALELGNS 1260
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 318 LVKAGFAVDEFVKKLIPLLSKGDII-IDGGNSQYLDTQKWCKELSGT 455
++K G +DE ++KL+ ++ K D+ I N Q DT KW EL +
Sbjct: 423 ILKNGKPIDEEMRKLVEVIIKDDVAEIVFKNPQLADTGKWALELGNS 469
>U64847-8|AAQ91904.1| 558|Caenorhabditis elegans
Acyltransferase-like protein 6,isoform b protein.
Length = 558
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -3
Query: 711 FHKMISSQISC-ISPYSIPLCTILTKWPAPSSRT 613
FH + +Q+ C ISP ++ C +L KW SR+
Sbjct: 241 FHVVYEAQMMCSISPVAVVSCLLLAKWRGKVSRS 274
>U64847-7|AAB04876.1| 718|Caenorhabditis elegans
Acyltransferase-like protein 6,isoform a protein.
Length = 718
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -3
Query: 711 FHKMISSQISC-ISPYSIPLCTILTKWPAPSSRT 613
FH + +Q+ C ISP ++ C +L KW SR+
Sbjct: 401 FHVVYEAQMMCSISPVAVVSCLLLAKWRGKVSRS 434
>U97003-1|AAB52270.2| 527|Caenorhabditis elegans
Udp-glucuronosyltransferase protein32 protein.
Length = 527
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -3
Query: 141 HNSQTYECNISFILRHFFKLD-FKSLSNYFKQFELFLCKTVNVFNQ 7
H+ Y + F R+ + + FK L+NYF LC T +F++
Sbjct: 475 HHMTPYSLKMPFYQRYHYDIFIFKFLTNYFIPVVFLLCVTKLIFSK 520
>U15167-1|AAB66360.1| 445|Caenorhabditis elegans serotonin receptor
precursor protein.
Length = 445
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 421 SKYCELPPSIIISPLLKSGISFFTNSSTANP 329
SK C LPP+++IS + +G + +S NP
Sbjct: 272 SKKCPLPPAVVISDIQANGGTGGKTNSIKNP 302
>AC084154-13|AAK29875.2| 445|Caenorhabditis elegans
Serotonin/octopamine receptor familyprotein 4 protein.
Length = 445
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 421 SKYCELPPSIIISPLLKSGISFFTNSSTANP 329
SK C LPP+++IS + +G + +S NP
Sbjct: 272 SKKCPLPPAVVISDIQANGGTGGKTNSIKNP 302
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,112,584
Number of Sequences: 27780
Number of extensions: 367679
Number of successful extensions: 897
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -