Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20704
(728 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 26 0.42
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 24 1.7
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 24 1.7
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 24 1.7
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 5.2
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 5.2
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 5.2
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 5.2
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 5.2
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 22 6.8
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 21 9.0
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 21 9.0
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 25.8 bits (54), Expect = 0.42
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 402 GNSQYLDTQKWCKELSGTGILYVGM 476
G+ L+TQ K +S G+L+VG+
Sbjct: 295 GSEDILNTQSLAKAVSKNGVLFVGL 319
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 402 GNSQYLDTQKWCKELSGTGILYVGM 476
G LDTQ K +S +G+L+ G+
Sbjct: 297 GVQNILDTQSSAKVVSKSGVLFFGL 321
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 402 GNSQYLDTQKWCKELSGTGILYVGM 476
G LDTQ K +S +G+L+ G+
Sbjct: 297 GVQNILDTQSSAKVVSKSGVLFFGL 321
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 402 GNSQYLDTQKWCKELSGTGILYVGM 476
G LDTQ K +S +G+L+ G+
Sbjct: 297 GVQNILDTQSSAKVVSKSGVLFFGL 321
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 581 AKANDEPCCDWVREDGA 631
A+ N +P WVR DG+
Sbjct: 27 ARGNPQPDIIWVRADGS 43
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.2 bits (45), Expect = 5.2
Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +2
Query: 536 PAAWPHIKEIFQAICAKANDEPCCDW--VREDGAGHFVKMVHNGIE 667
PA +KE + +CA CD+ + G + HNG E
Sbjct: 205 PAINRRLKETYSNMCALCEKPEVCDYPDIYSGYEGALRCLAHNGGE 250
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.2 bits (45), Expect = 5.2
Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +2
Query: 536 PAAWPHIKEIFQAICAKANDEPCCDW--VREDGAGHFVKMVHNGIE 667
PA +KE + +CA CD+ + G + HNG E
Sbjct: 205 PAINRRLKETYSNMCALCEKPEVCDYPDIYSGYEGALRCLAHNGGE 250
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 22.2 bits (45), Expect = 5.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 393 IDGGNSQYLDTQKWCKELS 449
ID N+ LDT+KW ++S
Sbjct: 371 IDEYNNNDLDTKKWNNKIS 389
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.2 bits (45), Expect = 5.2
Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +2
Query: 536 PAAWPHIKEIFQAICAKANDEPCCDW--VREDGAGHFVKMVHNGIE 667
PA +KE + +CA CD+ + G + HNG E
Sbjct: 205 PAINRRLKETYSNMCALCEKPEVCDYPDIYSGYEGALRCLAHNGGE 250
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.8 bits (44), Expect = 6.8
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 144 THNSQTYECNISFILRHFFKLDFKSLSNY 58
T SQ Y +S +L H F S+S+Y
Sbjct: 478 TGTSQMYAEKLSELLGHAFHSQVLSMSDY 506
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/30 (23%), Positives = 15/30 (50%)
Frame = -2
Query: 397 SIIISPLLKSGISFFTNSSTANPAFTKRTI 308
++ SPLL G+ + +NP + + +
Sbjct: 267 NLYYSPLLSHGLYYVDTEQFSNPQYEENNV 296
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -1
Query: 284 YHVIQGGSPNTFVPLASFF 228
+H+IQ +P+T V + S+F
Sbjct: 201 HHLIQTFAPSTLVVMLSWF 219
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,184
Number of Sequences: 438
Number of extensions: 3995
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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