Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20702
(701 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK124538-1|BAC85878.1| 256|Homo sapiens protein ( Homo sapiens ... 32 1.7
BC014009-1|AAH14009.2| 476|Homo sapiens GLTSCR2 protein protein. 30 7.0
BC010095-1|AAH10095.1| 478|Homo sapiens glioma tumor suppressor... 30 7.0
BC007248-1|AAH07248.1| 474|Homo sapiens glioma tumor suppressor... 30 7.0
BC006311-1|AAH06311.1| 478|Homo sapiens glioma tumor suppressor... 30 7.0
BC004229-1|AAH04229.2| 472|Homo sapiens GLTSCR2 protein protein. 30 7.0
AY535000-1|AAS46028.1| 478|Homo sapiens preS1 binding protein p... 30 7.0
AL359336-1|CAB94787.1| 467|Homo sapiens GLTSCR2, glioma tumor ... 30 7.0
AL359335-1|CAB94786.1| 459|Homo sapiens GLTSCR2, glioma tumor ... 30 7.0
AF182076-1|AAF62873.1| 478|Homo sapiens glioma tumor suppressor... 30 7.0
Z82187-1|CAI23588.1| 517|Homo sapiens TBC1 domain family, membe... 30 9.2
Z80896-1|CAI22357.1| 517|Homo sapiens TBC1 domain family, membe... 30 9.2
Z79999-1|CAI23583.1| 517|Homo sapiens TBC1 domain family, membe... 30 9.2
CR456412-1|CAG30298.1| 517|Homo sapiens C22orf4 protein. 30 9.2
BC029897-1|AAH29897.1| 517|Homo sapiens TBC1 domain family, mem... 30 9.2
BC020976-1|AAH20976.2| 517|Homo sapiens TBC1 domain family, mem... 30 9.2
BC001292-1|AAH01292.2| 517|Homo sapiens TBC1 domain family, mem... 30 9.2
AL118516-2|CAI17954.1| 517|Homo sapiens TBC1 domain family, mem... 30 9.2
AL096755-1|CAI21503.1| 517|Homo sapiens TBC1 domain family, mem... 30 9.2
AL023733-1|CAI18761.1| 517|Homo sapiens TBC1 domain family, mem... 30 9.2
>AK124538-1|BAC85878.1| 256|Homo sapiens protein ( Homo sapiens
cDNA FLJ42547 fis, clone BRACE3004880. ).
Length = 256
Score = 32.3 bits (70), Expect = 1.7
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Frame = -1
Query: 233 LISSTITLTGMSMTSFLFARRLLSMSLMVLAWS---MSSCSLDKLSTTFKGLSSASGTLS 63
L S T++ G+S T+ LFA RL S+++ + S +S+C L +++ + GLSS + +
Sbjct: 118 LSSMTLSACGLSSTT-LFACRLSSVTVSTCSLSSVTLSACGLSRVTLSACGLSSMTPSAC 176
Query: 62 GM 57
G+
Sbjct: 177 GL 178
>BC014009-1|AAH14009.2| 476|Homo sapiens GLTSCR2 protein protein.
Length = 476
Score = 30.3 bits (65), Expect = 7.0
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 379 KKSFLPSKMTLTQRKSLFVKASRKCQTVLENGTLVPSKLTSSRQLATFPRKFRRSD 546
K+ L K T Q+KSL +K + +LEN + VP+ +K RR +
Sbjct: 92 KEKGLTKKRTKVQKKSLLLKKPLRVDLILENTSKVPAPKDVLAHQVPNAKKLRRKE 147
>BC010095-1|AAH10095.1| 478|Homo sapiens glioma tumor suppressor
candidate region gene 2 protein.
Length = 478
Score = 30.3 bits (65), Expect = 7.0
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 379 KKSFLPSKMTLTQRKSLFVKASRKCQTVLENGTLVPSKLTSSRQLATFPRKFRRSD 546
K+ L K T Q+KSL +K + +LEN + VP+ +K RR +
Sbjct: 94 KEKGLTKKRTKVQKKSLLLKKPLRVDLILENTSKVPAPKDVLAHQVPNAKKLRRKE 149
>BC007248-1|AAH07248.1| 474|Homo sapiens glioma tumor suppressor
candidate region gene 2 protein.
Length = 474
Score = 30.3 bits (65), Expect = 7.0
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 379 KKSFLPSKMTLTQRKSLFVKASRKCQTVLENGTLVPSKLTSSRQLATFPRKFRRSD 546
K+ L K T Q+KSL +K + +LEN + VP+ +K RR +
Sbjct: 90 KEKGLTKKRTKVQKKSLLLKKPLRVDLILENTSKVPAPKDVLAHQVPNAKKLRRKE 145
>BC006311-1|AAH06311.1| 478|Homo sapiens glioma tumor suppressor
candidate region gene 2 protein.
Length = 478
Score = 30.3 bits (65), Expect = 7.0
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 379 KKSFLPSKMTLTQRKSLFVKASRKCQTVLENGTLVPSKLTSSRQLATFPRKFRRSD 546
K+ L K T Q+KSL +K + +LEN + VP+ +K RR +
Sbjct: 94 KEKGLTKKRTKVQKKSLLLKKPLRVDLILENTSKVPAPKDVLAHQVPNAKKLRRKE 149
>BC004229-1|AAH04229.2| 472|Homo sapiens GLTSCR2 protein protein.
Length = 472
Score = 30.3 bits (65), Expect = 7.0
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 379 KKSFLPSKMTLTQRKSLFVKASRKCQTVLENGTLVPSKLTSSRQLATFPRKFRRSD 546
K+ L K T Q+KSL +K + +LEN + VP+ +K RR +
Sbjct: 88 KEKGLTKKRTKVQKKSLLLKKPLRVDLILENTSKVPAPKDVLAHQVPNAKKLRRKE 143
>AY535000-1|AAS46028.1| 478|Homo sapiens preS1 binding protein
protein.
Length = 478
Score = 30.3 bits (65), Expect = 7.0
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 379 KKSFLPSKMTLTQRKSLFVKASRKCQTVLENGTLVPSKLTSSRQLATFPRKFRRSD 546
K+ L K T Q+KSL +K + +LEN + VP+ +K RR +
Sbjct: 94 KEKGLTKKRTKVQKKSLLLKKPLRVDLILENTSKVPAPKDVLAHQVPNAKKLRRKE 149
>AL359336-1|CAB94787.1| 467|Homo sapiens GLTSCR2, glioma tumor
suppressor candidate region protein 2 (AF182076_1)
protein.
Length = 467
Score = 30.3 bits (65), Expect = 7.0
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 379 KKSFLPSKMTLTQRKSLFVKASRKCQTVLENGTLVPSKLTSSRQLATFPRKFRRSD 546
K+ L K T Q+KSL +K + +LEN + VP+ +K RR +
Sbjct: 83 KEKGLTKKRTKVQKKSLLLKKPLRVDLILENTSKVPAPKDVLAHQVPNAKKLRRKE 138
>AL359335-1|CAB94786.1| 459|Homo sapiens GLTSCR2, glioma tumor
suppressor candidate region protein 2 (AF182076_1)
protein.
Length = 459
Score = 30.3 bits (65), Expect = 7.0
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 379 KKSFLPSKMTLTQRKSLFVKASRKCQTVLENGTLVPSKLTSSRQLATFPRKFRRSD 546
K+ L K T Q+KSL +K + +LEN + VP+ +K RR +
Sbjct: 75 KEKGLTKKRTKVQKKSLLLKKPLRVDLILENTSKVPAPKDVLAHQVPNAKKLRRKE 130
>AF182076-1|AAF62873.1| 478|Homo sapiens glioma tumor suppressor
candidate region protein 2 protein.
Length = 478
Score = 30.3 bits (65), Expect = 7.0
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 379 KKSFLPSKMTLTQRKSLFVKASRKCQTVLENGTLVPSKLTSSRQLATFPRKFRRSD 546
K+ L K T Q+KSL +K + +LEN + VP+ +K RR +
Sbjct: 94 KEKGLTKKRTKVQKKSLLLKKPLRVDLILENTSKVPAPKDVLAHQVPNAKKLRRKE 149
>Z82187-1|CAI23588.1| 517|Homo sapiens TBC1 domain family, member
22A protein.
Length = 517
Score = 29.9 bits (64), Expect = 9.2
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +2
Query: 446 GSVRRYWKMVRSYRAN*RAPGSLQHFQENFGAQIPKLNETLH 571
G+ +++WK R+N + PGS+QH +GAQ P + LH
Sbjct: 5 GARKQFWK-----RSNSKLPGSIQHV---YGAQHPPFDPLLH 38
>Z80896-1|CAI22357.1| 517|Homo sapiens TBC1 domain family, member
22A protein.
Length = 517
Score = 29.9 bits (64), Expect = 9.2
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +2
Query: 446 GSVRRYWKMVRSYRAN*RAPGSLQHFQENFGAQIPKLNETLH 571
G+ +++WK R+N + PGS+QH +GAQ P + LH
Sbjct: 5 GARKQFWK-----RSNSKLPGSIQHV---YGAQHPPFDPLLH 38
>Z79999-1|CAI23583.1| 517|Homo sapiens TBC1 domain family, member
22A protein.
Length = 517
Score = 29.9 bits (64), Expect = 9.2
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +2
Query: 446 GSVRRYWKMVRSYRAN*RAPGSLQHFQENFGAQIPKLNETLH 571
G+ +++WK R+N + PGS+QH +GAQ P + LH
Sbjct: 5 GARKQFWK-----RSNSKLPGSIQHV---YGAQHPPFDPLLH 38
>CR456412-1|CAG30298.1| 517|Homo sapiens C22orf4 protein.
Length = 517
Score = 29.9 bits (64), Expect = 9.2
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +2
Query: 446 GSVRRYWKMVRSYRAN*RAPGSLQHFQENFGAQIPKLNETLH 571
G+ +++WK R+N + PGS+QH +GAQ P + LH
Sbjct: 5 GARKQFWK-----RSNSKLPGSIQHV---YGAQHPPFDPLLH 38
>BC029897-1|AAH29897.1| 517|Homo sapiens TBC1 domain family, member
22A protein.
Length = 517
Score = 29.9 bits (64), Expect = 9.2
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +2
Query: 446 GSVRRYWKMVRSYRAN*RAPGSLQHFQENFGAQIPKLNETLH 571
G+ +++WK R+N + PGS+QH +GAQ P + LH
Sbjct: 5 GARKQFWK-----RSNSKLPGSIQHV---YGAQHPPFDPLLH 38
>BC020976-1|AAH20976.2| 517|Homo sapiens TBC1 domain family, member
22A protein.
Length = 517
Score = 29.9 bits (64), Expect = 9.2
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +2
Query: 446 GSVRRYWKMVRSYRAN*RAPGSLQHFQENFGAQIPKLNETLH 571
G+ +++WK R+N + PGS+QH +GAQ P + LH
Sbjct: 5 GARKQFWK-----RSNSKLPGSIQHV---YGAQHPPFDPLLH 38
>BC001292-1|AAH01292.2| 517|Homo sapiens TBC1 domain family, member
22A protein.
Length = 517
Score = 29.9 bits (64), Expect = 9.2
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +2
Query: 446 GSVRRYWKMVRSYRAN*RAPGSLQHFQENFGAQIPKLNETLH 571
G+ +++WK R+N + PGS+QH +GAQ P + LH
Sbjct: 5 GARKQFWK-----RSNSKLPGSIQHV---YGAQHPPFDPLLH 38
>AL118516-2|CAI17954.1| 517|Homo sapiens TBC1 domain family, member
22A protein.
Length = 517
Score = 29.9 bits (64), Expect = 9.2
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +2
Query: 446 GSVRRYWKMVRSYRAN*RAPGSLQHFQENFGAQIPKLNETLH 571
G+ +++WK R+N + PGS+QH +GAQ P + LH
Sbjct: 5 GARKQFWK-----RSNSKLPGSIQHV---YGAQHPPFDPLLH 38
>AL096755-1|CAI21503.1| 517|Homo sapiens TBC1 domain family, member
22A protein.
Length = 517
Score = 29.9 bits (64), Expect = 9.2
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +2
Query: 446 GSVRRYWKMVRSYRAN*RAPGSLQHFQENFGAQIPKLNETLH 571
G+ +++WK R+N + PGS+QH +GAQ P + LH
Sbjct: 5 GARKQFWK-----RSNSKLPGSIQHV---YGAQHPPFDPLLH 38
>AL023733-1|CAI18761.1| 517|Homo sapiens TBC1 domain family, member
22A protein.
Length = 517
Score = 29.9 bits (64), Expect = 9.2
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +2
Query: 446 GSVRRYWKMVRSYRAN*RAPGSLQHFQENFGAQIPKLNETLH 571
G+ +++WK R+N + PGS+QH +GAQ P + LH
Sbjct: 5 GARKQFWK-----RSNSKLPGSIQHV---YGAQHPPFDPLLH 38
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,558,848
Number of Sequences: 237096
Number of extensions: 1695881
Number of successful extensions: 5027
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5021
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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