Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20702
(701 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61948-4|AAB03146.1| 316|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z66522-7|CAA91409.2| 472|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z66520-13|CAA91392.2| 472|Caenorhabditis elegans Hypothetical p... 29 2.4
Z70306-3|CAA94325.1| 318|Caenorhabditis elegans Hypothetical pr... 29 3.2
U41110-4|AAA82419.1| 575|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical pr... 28 5.6
AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical ... 28 5.6
Z74032-8|CAA98462.3| 325|Caenorhabditis elegans Hypothetical pr... 28 7.4
AF026521-1|AAB82588.1| 253|Caenorhabditis elegans histone H1.4 ... 28 7.4
AF003388-4|AAB54269.1| 1150|Caenorhabditis elegans Hypothetical ... 28 7.4
Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z81050-1|CAB02850.1| 582|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z68132-2|CAA92220.2| 762|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical pr... 27 9.8
AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein. 27 9.8
>U61948-4|AAB03146.1| 316|Caenorhabditis elegans Hypothetical
protein C46A5.6 protein.
Length = 316
Score = 31.1 bits (67), Expect = 0.80
Identities = 21/43 (48%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +1
Query: 430 FVK-ASRKCQTVLENGTLVPSKLTSSRQLATFPRKFRRSDTKV 555
F+K A R+ TVLE T P+K T QL+ RKF+R+DT+V
Sbjct: 66 FLKVAKRRSSTVLETAT--PAK-TPKIQLSERRRKFQRNDTEV 105
>Z66522-7|CAA91409.2| 472|Caenorhabditis elegans Hypothetical
protein F14E5.1 protein.
Length = 472
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = -1
Query: 266 FNVFKSLFNDGLISSTITLTGMSMTSFLFARRLLSMSLMVLAWSMSSCSLDKLSTTFKGL 87
F K LF + + + L+ ++T+ + LL S L + + + STT GL
Sbjct: 257 FQKMKELFTERHLRMALILSVSALTNTVGLWALLLSSTFFLENANVESEIAEWSTTAMGL 316
Query: 86 SSASGTLSG 60
+ SGT++G
Sbjct: 317 AYVSGTITG 325
>Z66520-13|CAA91392.2| 472|Caenorhabditis elegans Hypothetical
protein F14E5.1 protein.
Length = 472
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = -1
Query: 266 FNVFKSLFNDGLISSTITLTGMSMTSFLFARRLLSMSLMVLAWSMSSCSLDKLSTTFKGL 87
F K LF + + + L+ ++T+ + LL S L + + + STT GL
Sbjct: 257 FQKMKELFTERHLRMALILSVSALTNTVGLWALLLSSTFFLENANVESEIAEWSTTAMGL 316
Query: 86 SSASGTLSG 60
+ SGT++G
Sbjct: 317 AYVSGTITG 325
>Z70306-3|CAA94325.1| 318|Caenorhabditis elegans Hypothetical
protein C06G8.4 protein.
Length = 318
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = -1
Query: 287 FLIFIRHFNVFKSLFNDGLISSTITLT--GMSMTSFLFARRLLSMSLMVLAWSMSSCSL 117
FL ++ F K++ L+ ITLT G +T FL +R++ +L S CSL
Sbjct: 25 FLCYLAIFQSPKAIRTYSLVLINITLTNVGACVTGFLLDQRIIQSGKSMLYVSYGYCSL 83
>U41110-4|AAA82419.1| 575|Caenorhabditis elegans Hypothetical
protein ZK682.5 protein.
Length = 575
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 595 RGPFCRGTQIKLLLKQSNRVSSL*RQFHSGLNQL 696
RG F R QI+ ++ NR+S + F GLN L
Sbjct: 323 RGAFQRTPQIQAIVLNKNRLSQVRADFFEGLNDL 356
>Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical
protein E01G4.4 protein.
Length = 534
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 321 GPPQHQEHETQNPEHHEDAEKIVSSVKN 404
GPP HQ+H Q +H+ A SS N
Sbjct: 133 GPPVHQQHYQQQQQHYGAATSAPSSSYN 160
>Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 291 KRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQ 437
+RP V + P PP Q + N +H + +V+ K+ ++ E ALR+
Sbjct: 378 QRPPVQMPPPPPPPQQNSPSVNENYHPE---LVNQFKSHLDEHEKALRR 423
>AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 291 KRPLVDLRNPGPPQHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQ 437
+RP V + P PP Q + N +H + +V+ K+ ++ E ALR+
Sbjct: 378 QRPPVQMPPPPPPPQQNSPSVNENYHPE---LVNQFKSHLDEHEKALRR 423
>Z74032-8|CAA98462.3| 325|Caenorhabditis elegans Hypothetical
protein F35B12.1 protein.
Length = 325
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 366 GVQDSVFRALDAAGARDFLNRLEAS*FPHFHPALQRFQIT 247
G +S++ L G LNR A FP ++P + F+IT
Sbjct: 93 GFSNSLYSGLQYTGVYIALNRFCAMFFPTYYPKIFDFKIT 132
>AF026521-1|AAB82588.1| 253|Caenorhabditis elegans histone H1.4
protein.
Length = 253
Score = 27.9 bits (59), Expect = 7.4
Identities = 34/174 (19%), Positives = 67/174 (38%), Gaps = 1/174 (0%)
Frame = +1
Query: 1 ETTRGPVANYIRARRTRSSIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRA 180
+TT P A ++ T++S K P+A V + ++ N + + +S++
Sbjct: 9 DTTETPAAPTKASKATKASKATKAPKATKAKTTKVPMVKADAAHPPFINMVTEAISSIKD 68
Query: 181 NKKEVIDIPVKVIVEEIKPSLKSDLKTLKCRMKMRKSRGL*SI*EIPGPRSIKSTKHRIL 360
K +K I K +L + ++ ++GL S + + + + R+
Sbjct: 69 RKGPSRAAILKYIT--TKYTLGDQANKINAHLRKALNKGLESNAFVQASGNGANGRFRLA 126
Query: 361 NTTKMLKKSFLPSKMTLTQRKSLFVKASRKCQTVLENG-TLVPSKLTSSRQLAT 519
T + KS +K T K ++K T + T V K + + AT
Sbjct: 127 EKTASVAKSPAAAKKDATGEKKATTTVAKKAATGEKKATTTVAKKAATGEKKAT 180
>AF003388-4|AAB54269.1| 1150|Caenorhabditis elegans Hypothetical
protein R10F2.6 protein.
Length = 1150
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +3
Query: 330 QHQEHETQNPEHHEDAEKIVSSVKNDINTAEIALRQGFQEVSDGIGKWYARTEQINELQA 509
+HQ+HE Q + E+AEK + +K D+ EI + V + + K R E A
Sbjct: 567 EHQKHEDQT-DKSEEAEKKM-KIKADLAAKEIWDKNMEHNVDEILMKRVNRVEMCRIQMA 624
Query: 510 ACNISKKI 533
N+ +K+
Sbjct: 625 LQNLDQKL 632
>Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical
protein F18C12.3 protein.
Length = 545
Score = 27.5 bits (58), Expect = 9.8
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 9/83 (10%)
Frame = +1
Query: 67 KVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRAN---KKEVIDIPVKVIVEEIK- 234
K+ E ED+ + V N +++ ++ K++ N ++N KK P+ VEE K
Sbjct: 338 KLVEEEDEEVETVKNQKKMKQIFEKELKSKEVKNPKKSNKSTKKPTKSAPIVKKVEEKKV 397
Query: 235 -----PSLKSDLKTLKCRMKMRK 288
+SD KTL ++ + K
Sbjct: 398 EENEVSDDESDQKTLVMKVDLSK 420
>Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical
protein F25H5.7 protein.
Length = 490
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +1
Query: 118 SEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKPSLKSDLKTLKCRMKMRKSRG 297
SE +L+D T D+ R +KK D K+ E+++ K K + KM KS
Sbjct: 92 SEDDLLDVKKTASKEDDKKRMDKK---DPSKKLSKEKLREEKKEQSKKVNKEKKMNKSES 148
Query: 298 L 300
+
Sbjct: 149 V 149
>Z81050-1|CAB02850.1| 582|Caenorhabditis elegans Hypothetical
protein C50B6.2 protein.
Length = 582
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Frame = +1
Query: 49 RSSIPDKVPEA----EDKPLNVVDN-LSSEQELIDQANTIKDIDNSLRANKKE 192
R+ I KV EA ++P V D + +EQ+ ++ + KD++NS N++E
Sbjct: 233 RAEIKQKVEEALGVASEEPETVADEAVKTEQKEAEEDSVEKDVENSDEQNQEE 285
>Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical
protein F18C12.3 protein.
Length = 545
Score = 27.5 bits (58), Expect = 9.8
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 9/83 (10%)
Frame = +1
Query: 67 KVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRAN---KKEVIDIPVKVIVEEIK- 234
K+ E ED+ + V N +++ ++ K++ N ++N KK P+ VEE K
Sbjct: 338 KLVEEEDEEVETVKNQKKMKQIFEKELKSKEVKNPKKSNKSTKKPTKSAPIVKKVEEKKV 397
Query: 235 -----PSLKSDLKTLKCRMKMRK 288
+SD KTL ++ + K
Sbjct: 398 EENEVSDDESDQKTLVMKVDLSK 420
>Z68132-2|CAA92220.2| 762|Caenorhabditis elegans Hypothetical
protein F09C8.2 protein.
Length = 762
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 49 RSSIPDKVPEAEDKPLNVVDNLSSEQELIDQANTIK-DIDNSLRANKKEVID 201
+ S P KVP A K + S+QEL ++ + D+ ++L +NKKE+ID
Sbjct: 489 KPSQPAKVPAAPIKAPRL-----SDQELESESQKLALDVISNLFSNKKEIID 535
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +1
Query: 58 IPDKVPEAEDKPLNVVDNLSSEQELIDQANTIKDIDNSLRANKKEVIDIPVKVIVEEIKP 237
+P+ PE +PL VV + L Q I + ++ + V++ V+V+ P
Sbjct: 126 VPESTPEPISEPLPVVQEEPASDSLTVQDEQIAQAEPAVEPEEPVVVE-HVEVVTASEDP 184
Query: 238 SLKS 249
+L+S
Sbjct: 185 TLES 188
>Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical
protein D2045.1b protein.
Length = 634
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 318 PGPPQHQEHETQNPEHH 368
P PPQ Q + Q+P HH
Sbjct: 469 PPPPQQQHQQQQHPPHH 485
>Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical
protein D2045.1a protein.
Length = 959
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 318 PGPPQHQEHETQNPEHH 368
P PPQ Q + Q+P HH
Sbjct: 794 PPPPQQQHQQQQHPPHH 810
>AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein.
Length = 959
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 318 PGPPQHQEHETQNPEHH 368
P PPQ Q + Q+P HH
Sbjct: 794 PPPPQQQHQQQQHPPHH 810
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,688,109
Number of Sequences: 27780
Number of extensions: 268253
Number of successful extensions: 1279
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1279
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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