Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20699
         (706 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   1.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   1.8  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   7.4  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   7.4  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   7.4  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 15/58 (25%), Positives = 27/58 (46%)
 Frame = +3

Query: 171 HFL*QLKSIKLPSYTAWRRSPKMKPAEERHRGHKE*TVQRLSTARWKILVWTVHVQDL 344
           HF  Q+KS+ L       ++ K++  +E         +Q LS   +K+  +TV +  L
Sbjct: 220 HFRRQIKSVDLFVIFPLTKAEKVRNLKEDEVTFSVQKIQELSHLHYKLANFTVKISGL 277


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 15/58 (25%), Positives = 27/58 (46%)
 Frame = +3

Query: 171 HFL*QLKSIKLPSYTAWRRSPKMKPAEERHRGHKE*TVQRLSTARWKILVWTVHVQDL 344
           HF  Q+KS+ L       ++ K++  +E         +Q LS   +K+  +TV +  L
Sbjct: 176 HFRRQIKSVDLFVIFPLTKAEKVRNLKEDEVTFSVQKIQELSHLHYKLANFTVKISGL 233


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 591 AMSMGTTRGSLVSQAAARGHCI 526
           A+ +G+ R S  S     GHC+
Sbjct: 24  AVGVGSGRNSAPSICGEHGHCV 45


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 328 YTYKIYHLASK 360
           Y + +YHLASK
Sbjct: 286 YCFNLYHLASK 296


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 328 YTYKIYHLASK 360
           Y + +YHLASK
Sbjct: 286 YCFNLYHLASK 296


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,782
Number of Sequences: 336
Number of extensions: 3837
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)