Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20698
         (712 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    47   2e-07
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    25   0.46 
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    24   1.4  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   3.2  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    23   3.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   3.2  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    22   5.7  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   7.5  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   9.9  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 46.8 bits (106), Expect = 2e-07
 Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
 Frame = +3

Query: 522 SQTGSGKTLAYILPAIVHI--NNQPPIRRGD--GPIALVLAPTRELAQQIQQVAADFGHT 689
           +QTGSGKT A++LP I ++  +  PP    +   P+ ++++PTRELA QI      F + 
Sbjct: 202 AQTGSGKTAAFMLPIIHNLLSDKNPPNTENNCAQPVVVIMSPTRELAIQIADQGKKFAYN 261

Query: 690 SYVR 701
           S V+
Sbjct: 262 STVK 265



 Score = 40.7 bits (91), Expect = 1e-05
 Identities = 19/52 (36%), Positives = 29/52 (55%)
 Frame = +2

Query: 353 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 508
           EV V+G +   PI  FE +    ++ + VK  GY +PT IQ    P+ +SG+
Sbjct: 145 EVKVTGNDAPPPITSFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGR 196


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 154 DELSPEFVPPPKFEPTVSTAIIP 86
           DE+ PE VP P+ +PT +T   P
Sbjct: 389 DEIPPEPVPTPEPQPTQTTESEP 411


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 7   VDPASERIHSLNKHLQLNPKN 69
           VDP SER+    + L++NP N
Sbjct: 511 VDPDSERMAFWQRILKINPNN 531


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 7   VDPASERIHSLNKHLQLNPKN 69
           VDP S+R+    + L++NP N
Sbjct: 511 VDPDSDRMAFWQRILKINPNN 531


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 7   VDPASERIHSLNKHLQLNPKN 69
           VDP S+R+    + L++NP N
Sbjct: 511 VDPDSDRMAFWQRILKINPNN 531


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 588 VGYLCAQWLARCRPTFCRN 532
           +GY+C   +  CRP  C N
Sbjct: 253 LGYICEINVDDCRPGACHN 271



 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +1

Query: 226 GRTCDAQIGICFTPTFQQKLL*STSYSSQKIT 321
           GR C++++  C T   Q   + +T ++  K T
Sbjct: 332 GRHCESKVNFCATSPCQNGGVCTTIHAGHKCT 363


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 157 GLATVAIDLEDLEALVGKKNSLEGRTCDA 243
           G+   +I+ +DL A  G KN+L     DA
Sbjct: 345 GVMIWSIETDDLHATCGTKNALLHAVNDA 373


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -1

Query: 112 PTVSTAIIPITRHDYFSDLVEDVYLNYGFFLT 17
           P   T  IP    DY  DLV  + +N+   +T
Sbjct: 211 PFRKTTEIPPEPEDYVEDLVGHIEVNHSAPIT 242


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory
          receptor candidate 50 protein.
          Length = 350

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 97 AIIPITRHDYFSDLVEDVYL 38
          A++P+ +H     LV  VYL
Sbjct: 18 ALLPVKKHHRLEKLVPCVYL 37


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,796
Number of Sequences: 336
Number of extensions: 4120
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)