Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20698
         (712 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    47   5e-07
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    27   0.77 
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    24   4.1  
AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione S-tran...    24   4.1  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   5.4  
Z22925-1|CAA80505.1|  211|Anopheles gambiae ANG12 precursor prot...    23   7.2  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   7.2  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    23   7.2  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 47.2 bits (107), Expect = 5e-07
 Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
 Frame = +3

Query: 522 SQTGSGKTLAYILPAIVH-INNQPPIR-RGDGPIALVLAPTRELAQQIQQVAADFGH 686
           +QTGSGKT A++LP I H ++ +  +  R   P  +++APTRELA QI      F H
Sbjct: 218 AQTGSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAH 274



 Score = 37.5 bits (83), Expect = 4e-04
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = +2

Query: 353 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 508
           +V VSG    + ++ FE +   + V   V+   Y +PTPIQ    PI ++G+
Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGR 212


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 26.6 bits (56), Expect = 0.77
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
 Frame = -2

Query: 228 ALQRILFSHQSLQILQ------IYCHRCQTETNYRRNLCLLQNLNPP 106
           A +R+  SHQS  IL+      I CHRC+   + +R+ C +++ N P
Sbjct: 180 AQKRMEKSHQSESILRVGPEKKITCHRCRKPGHMKRD-CPMESNNTP 225


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/33 (27%), Positives = 19/33 (57%)
 Frame = +3

Query: 513 SWRSQTGSGKTLAYILPAIVHINNQPPIRRGDG 611
           ++++Q  + ++   I  A+V +  Q  +RR DG
Sbjct: 460 NYKAQKAAARSHVKIFKALVRLRKQRTLRRNDG 492


>AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione
           S-transferase e8 protein.
          Length = 217

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
 Frame = +1

Query: 457 RTDAHSSSRLADSYVWKDLVGVAKRVP--AKRWPTSCQ 564
           R  AH    +AD  +   L  VA  VP  A RWP  C+
Sbjct: 148 RYTAHDQLSVADFAIVATLSTVAIFVPLPADRWPRVCE 185


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -1

Query: 133 VPPPKFEPTVSTAIIPITRHDYFSDLVEDVYLNYGFFLTQG 11
           +P P   P  ++A+ P+   D F+ ++E + LN     T+G
Sbjct: 457 LPKPGKPPDDASALRPLALIDNFAKILEILILNRLVVYTEG 497


>Z22925-1|CAA80505.1|  211|Anopheles gambiae ANG12 precursor
           protein.
          Length = 211

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +1

Query: 112 VQILEEAQIPAIIRLGLATVAIDLEDLEALVGKKNSLEGRT 234
           +Q LEEA +PA   L +    + L  L+    +  SL  RT
Sbjct: 85  LQYLEEAGVPAYESLNVVADFLGLSPLKPTSVRSLSLAART 125


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 279 LLKGWSETDPNLGVACSALQRI 214
           LL G  + DP+LG AC  +  +
Sbjct: 406 LLVGRMKVDPDLGAACGRIHPV 427


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 305 VLKRSPYEVEEYRNKHEVTVSGVEVHNPIQY 397
           V++R P  V+  +  H+V    V VH P+ +
Sbjct: 139 VVRREPSAVKIAQPVHKVIAQPVHVHAPVAH 169


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 768,398
Number of Sequences: 2352
Number of extensions: 15708
Number of successful extensions: 35
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)