Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20698
(712 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 83 2e-16
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 70 1e-12
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 69 3e-12
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 59 4e-09
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 58 5e-09
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 51 9e-07
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 51 9e-07
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 51 9e-07
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 48 7e-06
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 43 2e-04
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 43 2e-04
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 43 2e-04
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 43 2e-04
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 43 2e-04
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 43 2e-04
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 43 2e-04
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 43 2e-04
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 43 2e-04
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 43 2e-04
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 43 2e-04
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 42 3e-04
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 42 3e-04
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 42 3e-04
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 41 0.001
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 39 0.004
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 39 0.004
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 39 0.004
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 38 0.005
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 38 0.005
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 38 0.007
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 38 0.009
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 38 0.009
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 36 0.029
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 36 0.029
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 36 0.029
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 34 0.087
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 34 0.12
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 33 0.20
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 32 0.47
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 31 0.61
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 30 1.9
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.3
U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical pr... 29 4.3
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 4.3
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 4.3
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 28 5.7
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 28 7.6
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 83.0 bits (196), Expect = 2e-16
Identities = 37/63 (58%), Positives = 50/63 (79%)
Frame = +3
Query: 522 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 701
++TGSGKTLA++LPA+VHI Q +RG+GP LVL PTRELAQQ+Q+V+ DF H+ ++
Sbjct: 173 AKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLK 232
Query: 702 NTC 710
TC
Sbjct: 233 MTC 235
Score = 62.1 bits (144), Expect = 4e-10
Identities = 29/83 (34%), Positives = 50/83 (60%)
Frame = +2
Query: 260 SLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV 439
+L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA P + + +
Sbjct: 86 NLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHE-L 144
Query: 440 KTMGYKEPTPIQAQGWPIAMSGK 508
+++PT IQ+ WPIAMSG+
Sbjct: 145 LYGKFQKPTVIQSISWPIAMSGR 167
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 70.1 bits (164), Expect = 1e-12
Identities = 31/63 (49%), Positives = 44/63 (69%)
Frame = +3
Query: 522 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 701
++TGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA Q+ Q A F +
Sbjct: 309 AKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNIN 368
Query: 702 NTC 710
C
Sbjct: 369 PIC 371
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/84 (30%), Positives = 45/84 (53%)
Frame = +2
Query: 257 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQG 436
+ Q FNKNFY+ H + + +V +N + V G++ P+ F +F + +
Sbjct: 220 IQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEA 279
Query: 437 VKTMGYKEPTPIQAQGWPIAMSGK 508
++ Y++PTPIQA P A+SG+
Sbjct: 280 IRKSEYEQPTPIQAMAIPSALSGR 303
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 69.3 bits (162), Expect = 3e-12
Identities = 32/63 (50%), Positives = 43/63 (68%)
Frame = +3
Query: 522 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 701
++TGSGKTLA++LP HI +QP + GDGPIA++LAPTRELA Q + A F ++
Sbjct: 348 AKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLK 407
Query: 702 NTC 710
C
Sbjct: 408 VAC 410
Score = 49.2 bits (112), Expect = 3e-06
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQ 433
V + F KNFY + + + EV+ YR + + +TV G++ PI+ + + +
Sbjct: 258 VYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMN 317
Query: 434 GVKTMGYKEPTPIQAQGWPIAMSGK 508
+K Y +PT IQAQ P MSG+
Sbjct: 318 VLKKFEYSKPTSIQAQAIPSIMSGR 342
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 4/58 (6%)
Frame = +3
Query: 522 SQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFG 683
++TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI++ FG
Sbjct: 345 AETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFG 402
Score = 58.4 bits (135), Expect = 5e-09
Identities = 25/57 (43%), Positives = 35/57 (61%)
Frame = +2
Query: 338 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 508
+R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + +
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNR 339
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 58.4 bits (135), Expect = 5e-09
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 6/69 (8%)
Frame = +3
Query: 522 SQTGSGKTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPTRELAQQIQQVAADFG 683
SQTGSGKTLA++LPA++HI+ Q + D P LVL+PTRELAQQI+ +
Sbjct: 128 SQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYS 187
Query: 684 HTSYVRNTC 710
+ Y ++ C
Sbjct: 188 YNGY-KSVC 195
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +2
Query: 365 SGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGK 508
S V++ P+ FE+A + G ++ G+++P+PIQ+Q WP+ +SG+
Sbjct: 74 STVKIPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQ 122
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 50.8 bits (116), Expect = 9e-07
Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 10/70 (14%)
Frame = +3
Query: 522 SQTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQQVA 671
+QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A
Sbjct: 183 AQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEA 242
Query: 672 ADFGHTSYVR 701
F + S ++
Sbjct: 243 TKFSYKSNIQ 252
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +2
Query: 332 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 508
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ +
Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANR 177
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 50.8 bits (116), Expect = 9e-07
Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 10/70 (14%)
Frame = +3
Query: 522 SQTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQQVA 671
+QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A
Sbjct: 167 AQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEA 226
Query: 672 ADFGHTSYVR 701
F + S ++
Sbjct: 227 TKFSYKSNIQ 236
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +2
Query: 332 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 508
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ +
Sbjct: 104 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANR 161
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 50.8 bits (116), Expect = 9e-07
Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 10/70 (14%)
Frame = +3
Query: 522 SQTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQQVA 671
+QTGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI + A
Sbjct: 164 AQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEA 223
Query: 672 ADFGHTSYVR 701
F + S ++
Sbjct: 224 TKFSYKSNIQ 233
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +2
Query: 332 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 508
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ +
Sbjct: 101 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANR 158
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 48.0 bits (109), Expect = 7e-06
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Frame = +3
Query: 522 SQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQI 659
+ TGSGKT+ ++LP ++ Q P R +GP L++ P+RELA+QI
Sbjct: 234 ASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQI 282
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +2
Query: 293 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 469
P + ++S + E R + ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 470 IQAQGWPIAMSGK 508
IQ QG P+A+SG+
Sbjct: 216 IQIQGIPVALSGR 228
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 5/54 (9%)
Frame = +3
Query: 519 RSQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQIQQ 665
+++T +GKT A+ LP I I + R+ DGP+AL+LAPTRELA QI +
Sbjct: 424 QAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQIHE 477
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/63 (38%), Positives = 37/63 (58%)
Frame = +3
Query: 522 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 701
S+TGSGKT A+++P + + R G AL+++PTRELA Q +V + G + +R
Sbjct: 68 SRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLR 123
Query: 702 NTC 710
C
Sbjct: 124 CAC 126
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +2
Query: 380 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 508
H +++ V + ++ G+ +PTPIQ + P M GK
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGK 62
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/63 (38%), Positives = 37/63 (58%)
Frame = +3
Query: 522 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 701
S+TGSGKT A+++P + + R G AL+++PTRELA Q +V + G + +R
Sbjct: 68 SRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLR 123
Query: 702 NTC 710
C
Sbjct: 124 CAC 126
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +2
Query: 380 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 508
H +++ V + ++ G+ +PTPIQ + P M GK
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGK 62
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 43.2 bits (97), Expect = 2e-04
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 356 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 508
V +G +V PI F + + +++++ +KT GY PTP+Q P G+
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGR 204
Score = 37.1 bits (82), Expect = 0.012
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 11/66 (16%)
Frame = +3
Query: 522 SQTGSGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTRELAQQIQQV 668
+QTGSGKT A+++P + I P R+ P ALVL+PTREL+ QI
Sbjct: 210 AQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNE 269
Query: 669 AADFGH 686
+ F +
Sbjct: 270 SRKFAY 275
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/55 (41%), Positives = 37/55 (67%)
Frame = +3
Query: 519 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 683
++Q+G+GKT + + + I+++ P + ALV+APTRELAQQIQ+V + G
Sbjct: 72 QAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALG 121
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +3
Query: 522 SQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGH 686
+QTGSGKT A++LP + + + + G+G P ++L PTRELA QI F +
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAY 443
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 386 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 505
P + F EAN + +Q+ V GY + TPIQ P+ G
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQG 378
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/55 (41%), Positives = 37/55 (67%)
Frame = +3
Query: 519 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 683
++Q+G+GKT + + + I+++ P + ALV+APTRELAQQIQ+V + G
Sbjct: 72 QAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALG 121
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +3
Query: 522 SQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGH 686
+QTGSGKT A++LP + + + + G+G P ++L PTRELA QI F +
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAY 443
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 386 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 505
P + F EAN + +Q+ V GY + TPIQ P+ G
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQG 378
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Frame = +3
Query: 522 SQTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHT 689
+QTGSGKT A++LP + + + + G +G P ++L PTRELA QI F +
Sbjct: 342 AQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQ 401
Query: 690 S 692
S
Sbjct: 402 S 402
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 386 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA 520
P + F +++ P +++ V+ GY TPIQ P+ GK LA
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/51 (39%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = +3
Query: 519 RSQTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQIQQV 668
R++TGSGKT A+++P + + + G GP A+++APT+EL QI ++
Sbjct: 132 RARTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAVIIAPTKELITQIYKL 182
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Frame = +3
Query: 522 SQTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQQVAADFGHT 689
+QTGSGKT A++LP + + + + G +G P ++L PTRELA QI F +
Sbjct: 342 AQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQ 401
Query: 690 S 692
S
Sbjct: 402 S 402
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 386 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA 520
P + F +++ P +++ V+ GY TPIQ P+ GK LA
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +3
Query: 522 SQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGH 686
+QTGSGKT A++LP + + + + G+G P ++L PTRELA QI F +
Sbjct: 385 AQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAY 443
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 386 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 505
P + F EAN + +Q+ V GY + TPIQ P+ G
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQG 378
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +3
Query: 522 SQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGH 686
+QTGSGKT A++LP + + ++ + G+G P ++L PTREL QI F +
Sbjct: 596 AQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAY 654
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 398 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 505
F EAN + +++ V GY + TPIQ P+ G
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQG 589
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +3
Query: 522 SQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGH 686
+QTGSGKT A++LP + + ++ + G+G P ++L PTREL QI F +
Sbjct: 596 AQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAY 654
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 398 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 505
F EAN + +++ V GY + TPIQ P+ G
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQG 589
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +3
Query: 522 SQTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQQVAADFGH 686
+QTGSGKT A++LP + + ++ + G+G P ++L PTREL QI F +
Sbjct: 596 AQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAY 654
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 398 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG 505
F EAN + +++ V GY + TPIQ P+ G
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQG 589
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/53 (47%), Positives = 31/53 (58%)
Frame = +3
Query: 522 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADF 680
S TGSGKTLA++LP + I N G AL+L+P+REL QI V F
Sbjct: 53 SPTGSGKTLAFVLPMMRMIQNAKLQPADIG--ALILSPSRELCSQIVSVIQPF 103
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/52 (38%), Positives = 37/52 (71%)
Frame = +3
Query: 522 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 677
++TGSGKTLA++LPAI + ++ ++ +G ++++PTREL+ Q V ++
Sbjct: 112 AKTGSGKTLAFLLPAI-ELLHKLNWKQHNGTGVIIVSPTRELSMQTYGVLSE 162
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +3
Query: 522 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 665
++TG+GKTLA+ +P + ++ P G AL+L PTRELA QI +
Sbjct: 133 ARTGTGKTLAFAIPILQKLSVDP-----YGIYALILTPTRELAFQIAE 175
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +3
Query: 522 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 665
++TG+GKTLA+ +P + ++ P G AL+L PTRELA QI +
Sbjct: 133 ARTGTGKTLAFAIPILQKLSVDP-----YGIYALILTPTRELAFQIAE 175
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/53 (41%), Positives = 32/53 (60%)
Frame = +3
Query: 519 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAAD 677
R++ G+GKT AY +P I I QP ++ A+V+ PTRELA Q Q+ +
Sbjct: 86 RAKNGTGKTGAYCIPVIEKI--QPALKAIQ---AMVIVPTRELALQTSQICVE 133
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Frame = +3
Query: 522 SQTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQ 665
++TGSGKTLA+ +P + + + + GP AL++APTREL QI +
Sbjct: 33 AETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 86
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Frame = +3
Query: 522 SQTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQQ 665
++TGSGKTLA+ +P + + + + GP AL++APTREL QI +
Sbjct: 200 AETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMK 253
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +3
Query: 528 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQV 668
TG+GKT A++LP + + +P + LVL PTRELA Q+ QV
Sbjct: 194 TGTGKTAAFVLPILERMIYRP--KGASCTRVLVLVPTRELAIQVFQV 238
Score = 34.3 bits (75), Expect = 0.087
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 398 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 508
FE+ N + + GY +PTPIQ P+A++GK
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGK 186
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = +3
Query: 519 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 683
++Q+G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+V G
Sbjct: 69 QAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALG 118
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = +3
Query: 519 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 683
++Q+G+GKT + + + ++ Q +R AL+L+PTRELA QIQ+V G
Sbjct: 69 QAQSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALG 118
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 35.9 bits (79), Expect = 0.029
Identities = 21/48 (43%), Positives = 28/48 (58%)
Frame = +3
Query: 522 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 665
++TGSGKT A+ +P + + + P LVL PTRELA QI Q
Sbjct: 88 AETGSGKTGAFAIPVLQSLLDHP-----QAFFCLVLTPTRELAFQIGQ 130
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = +3
Query: 522 SQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQ 656
+ TGSGKTLA+++P ++ + ++ P L++APTREL Q
Sbjct: 780 AHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQ 829
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Frame = +3
Query: 522 SQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQ 656
+ TGSGKTLA+++P ++ + ++ P L++APTREL Q
Sbjct: 780 AHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQ 829
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 34.3 bits (75), Expect = 0.087
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +3
Query: 528 TGSGKTLAYILPA---IVHINNQPPIRRGDGP--IALVLAPTRELAQQ 656
TGSGKTLA+ LP I+ + + + +A+VL PTRELA Q
Sbjct: 172 TGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +3
Query: 519 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 683
++Q+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 254 QAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 303
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +3
Query: 519 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 683
++Q+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 279 QAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 328
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +3
Query: 519 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 683
++Q+G+GKT A++L + I+ P + LAPT ELA+QI +V G
Sbjct: 663 QAQSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 712
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 33.1 bits (72), Expect = 0.20
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +3
Query: 522 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 656
++TGSGKTLA ++P ++ + G AL+++PTRELA Q
Sbjct: 120 AKTGSGKTLALVIP-VLEALWRAKWSPDYGLGALIISPTRELALQ 163
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 31.9 bits (69), Expect = 0.47
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 528 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 659
TGSGKT+ Y+LP + + ++P A++L P + L QI
Sbjct: 165 TGSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLVAQI 204
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 31.5 bits (68), Expect = 0.61
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 528 TGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTRELAQQI 659
TG GKT A+++PAI + + +P I P L+LA T L +Q+
Sbjct: 138 TGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQL 185
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 13 PASERIHSLNKHLQLNPKNNHVW 81
PAS ++H L++ LQLN N+ W
Sbjct: 773 PASHQLHCLSRALQLNKANDSAW 795
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3
Query: 528 TGSGKTLAYILPAIVH 575
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical
protein B0361.10 protein.
Length = 201
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 460 TDAHSSSRLADSYVWKDLVGVAKRVPAKRWP 552
TDA R+A S++ + L RVPA +WP
Sbjct: 83 TDAEYQQRVAMSFLGRVLDDFTTRVPATQWP 113
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = -1
Query: 502 RHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILFD 329
R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F+
Sbjct: 29 RKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIFN 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = -1
Query: 502 RHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILFD 329
R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F+
Sbjct: 29 RKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIFN 86
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +3
Query: 519 RSQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 698
+SQ GSGKT+ ++ + I+ + + ++LAP R +AQ+ + G V
Sbjct: 39 QSQAGSGKTVISLIDILQGIDCEDAHLQ-----VILLAPQRGMAQRAHEQLKSLGRNLNV 93
Query: 699 RNTC 710
TC
Sbjct: 94 NATC 97
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 293 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 451
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 293 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 451
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,875,522
Number of Sequences: 27780
Number of extensions: 375088
Number of successful extensions: 1209
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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