Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20697
(620 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 5e-22
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 2e-12
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 53 2e-07
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 46 2e-05
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 42 4e-04
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 39 0.004
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 38 0.009
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 37 0.011
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 37 0.015
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 36 0.027
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.035
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 35 0.046
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 35 0.046
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.046
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.081
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.19
SB_19664| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.43
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.57
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.75
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 31 0.75
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.75
SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) 31 1.00
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.00
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35) 30 1.7
SB_39892| Best HMM Match : TOBE (HMM E-Value=3.4) 29 2.3
SB_13998| Best HMM Match : Kringle (HMM E-Value=0.0016) 29 2.3
SB_25592| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 29 3.0
SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_24124| Best HMM Match : DUF1213 (HMM E-Value=3.9) 29 4.0
SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 29 4.0
SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012) 28 5.3
SB_6581| Best HMM Match : HEAT (HMM E-Value=3e-05) 28 5.3
SB_23424| Best HMM Match : Ank (HMM E-Value=1.1e-16) 28 7.0
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 27 9.3
SB_54542| Best HMM Match : Ribosomal_60s (HMM E-Value=0.39) 27 9.3
SB_51958| Best HMM Match : TBC (HMM E-Value=0.00039) 27 9.3
SB_27882| Best HMM Match : Cob_adeno_trans (HMM E-Value=3.6) 27 9.3
SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 27 9.3
SB_2034| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 101 bits (242), Expect = 5e-22
Identities = 57/122 (46%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Frame = +1
Query: 256 AAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFAN 432
A +SKTA APIERVKLL+Q Q + K D YKG++D R + +G LSFWRGN AN
Sbjct: 20 AIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEGFLSFWRGNLAN 79
Query: 433 VIRYFPTQALNFAFKTSTSSVPRRRYKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFGS 612
IRYFPTQALNFAFK ++ + + + + F SL FVY LD+
Sbjct: 80 CIRYFPTQALNFAFKDQVKALFKPKKTDSNAIK-FSKNIASGGAAGAMSLFFVYSLDYCR 138
Query: 613 TR 618
TR
Sbjct: 139 TR 140
Score = 32.7 bits (71), Expect = 0.25
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +1
Query: 349 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 441
+YKG +D ++I K++G +S +G AN++R
Sbjct: 248 KYKGSIDCTIQILKKEGAMSLMKGAGANILR 278
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 69.3 bits (162), Expect = 2e-12
Identities = 32/71 (45%), Positives = 51/71 (71%)
Frame = +1
Query: 259 AVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVI 438
AVS+T+V+P+ERVK+LLQ+Q + ++KG++ ++I KE+G+L +++GN NVI
Sbjct: 46 AVSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGILGYFKGNGTNVI 99
Query: 439 RYFPTQALNFA 471
R FP A+ FA
Sbjct: 100 RIFPYSAVQFA 110
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 60.5 bits (140), Expect = 1e-09
Identities = 33/72 (45%), Positives = 44/72 (61%)
Frame = +1
Query: 253 LAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFAN 432
LA VS+TA AP++R+K+LLQVQ A+ GIV F + +E G+ S WRGN AN
Sbjct: 146 LAGVSRTATAPLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGGIKSLWRGNGAN 199
Query: 433 VIRYFPTQALNF 468
VI+ P + F
Sbjct: 200 VIKIAPESGIKF 211
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/69 (26%), Positives = 39/69 (56%)
Frame = +1
Query: 265 SKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 444
S+T++ P+E +K L ++ + Y+G++ A I +++G+ SF+RG F +++
Sbjct: 244 SQTSIYPLEVLKTRLAIRKTGQ-------YRGLLHAASVIYQKEGIRSFYRGLFPSLLGI 296
Query: 445 FPTQALNFA 471
P ++ A
Sbjct: 297 IPYAGIDLA 305
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +1
Query: 256 AAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 417
A +SKTA APIERVKLL+Q Q + K YKG+VD +R + +G+ SFWR
Sbjct: 21 AIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDCTMRTYRAEGIGSFWR 75
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/72 (30%), Positives = 40/72 (55%)
Frame = +1
Query: 256 AAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 435
A ++++ +P+E VK+L QV + G++ F + K +G+ +FW+GN +
Sbjct: 69 AVLARSLTSPLEVVKVLAQV-------GTQEAKPGLIRTFASVYKREGIKAFWKGNGVSC 121
Query: 436 IRYFPTQALNFA 471
IR FP A+ +A
Sbjct: 122 IRLFPYSAVQYA 133
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +1
Query: 262 VSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 441
++ V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++G + +
Sbjct: 165 IAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKGVTPSFLG 221
Query: 442 YFP 450
FP
Sbjct: 222 LFP 224
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/64 (32%), Positives = 38/64 (59%)
Frame = +1
Query: 277 VAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQ 456
+AP++ VK+ LQ+Q +K+ + Y+G VD V++ + +GL ++GN +R P
Sbjct: 51 IAPVDLVKIKLQMQTEAKR-STRSVYRGPVDCLVKLYRSRGLAGCFQGNTVTAVRDIPGF 109
Query: 457 ALNF 468
A+ F
Sbjct: 110 AVYF 113
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +1
Query: 349 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 468
RYKG++D ++ KE+G++ F RG + ++R F Q L F
Sbjct: 170 RYKGMMDCALQSYKEEGMIVFTRGIWPTLLRGF-LQVLRF 208
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/68 (29%), Positives = 36/68 (52%)
Frame = +1
Query: 259 AVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVI 438
A TAV PI+ VK +Q Q + A++ YK +D F ++ + +G + +RG ++
Sbjct: 925 ATGATAVYPIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLL 982
Query: 439 RYFPTQAL 462
P +A+
Sbjct: 983 GVSPEKAI 990
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 37.5 bits (83), Expect = 0.009
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +1
Query: 262 VSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 420
++ V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++G
Sbjct: 434 IAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKG 483
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 37.1 bits (82), Expect = 0.011
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +1
Query: 334 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 468
I ++Y G+++AF RI +++G+ +F+RG +I P ++F
Sbjct: 19 ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISF 63
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 36.7 bits (81), Expect = 0.015
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +1
Query: 349 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFA 471
+Y G+ +I +++GL +++GN N++R P A+ FA
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFA 630
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 35.9 bits (79), Expect = 0.027
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +1
Query: 280 APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 420
AP ERVK LLQVQ K+ RY+G+ D +++ + GL ++G
Sbjct: 179 APTERVKCLLQVQ---KESGTKARYQGLGDCLLQVYRTGGLRGVFKG 222
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 35.5 bits (78), Expect = 0.035
Identities = 20/73 (27%), Positives = 31/73 (42%)
Frame = +1
Query: 283 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 462
P++ VK Q + +Y G D +I G+ +F +G A ++R FPT A
Sbjct: 377 PVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQGLLATILRGFPTNAA 436
Query: 463 NFAFKTSTSSVPR 501
T T + R
Sbjct: 437 TLTVVTLTLRLAR 449
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 35.1 bits (77), Expect = 0.046
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +1
Query: 274 AVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 453
A P++ K +Q + I YKG +D RI + +G+ + W+G R P
Sbjct: 110 ASMPVDIAKTRIQNMRI---IDGKPEYKGTMDVLARIVRNEGVFALWKGFTPYYFRIGPH 166
Query: 454 QALNFAF 474
L F F
Sbjct: 167 TVLTFIF 173
Score = 32.7 bits (71), Expect = 0.25
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 352 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFA 471
Y + +A R+ KE+G+L+ WRG +R A A
Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLA 74
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 35.1 bits (77), Expect = 0.046
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +1
Query: 283 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 462
PI+ K +QVQ + Q A +Y+ + A I + G+ ++G A ++R P
Sbjct: 221 PIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVRNIPANGF 280
Query: 463 NFAFKTSTSSV 495
F F T ++
Sbjct: 281 FFGFYEFTKNL 291
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 35.1 bits (77), Expect = 0.046
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +1
Query: 262 VSKTAVAPIERVKLLLQVQ---HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 420
+SK + P + +K +QVQ + Q+Y G+ D F I KE+G + ++G
Sbjct: 42 ISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCFRTILKEEGAMGLFKG 97
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 34.3 bits (75), Expect = 0.081
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Frame = +1
Query: 238 PGWRYLAAVSKTAVA-----PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 402
P WR+++ + VA P++ V+ L VQ +S + ++ Y GIV A RI E+G+
Sbjct: 28 PLWRFVSGATAGVVATASTHPLDVVRARLTVQDMSTRSISN--YTGIVSALRRIHIEEGI 85
Query: 403 LSFWRGNFANVIRYFP 450
++G +++ P
Sbjct: 86 RGLYKGLVPSLVSIAP 101
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/36 (38%), Positives = 25/36 (69%)
Frame = +1
Query: 361 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 468
++ AF I + +GLL++++GN A ++R FP A+ F
Sbjct: 13 VLTAFRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQF 48
>SB_19664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 32.7 bits (71), Expect = 0.25
Identities = 24/61 (39%), Positives = 29/61 (47%)
Frame = +3
Query: 189 RTKCRTSPIRSRSLRTSWLAVSRRRLQDRRSTNRACQAAAPSTARQQADRRRPALQGYRR 368
RT+ R + R R + V+RRR DRR T A T R+Q DRRR Q R
Sbjct: 115 RTRARVTSRRQVDRRRTRAQVTRRRQVDRRRTR------ARVTRRRQVDRRRTRAQVTSR 168
Query: 369 R 371
R
Sbjct: 169 R 169
Score = 30.7 bits (66), Expect = 1.00
Identities = 23/61 (37%), Positives = 29/61 (47%)
Frame = +3
Query: 189 RTKCRTSPIRSRSLRTSWLAVSRRRLQDRRSTNRACQAAAPSTARQQADRRRPALQGYRR 368
RT+ R + R R + V+ RR DRR T A T R+Q DRRR + RR
Sbjct: 100 RTRARVTIRRQVDRRRTRARVTSRRQVDRRRTR------AQVTRRRQVDRRRTRARVTRR 153
Query: 369 R 371
R
Sbjct: 154 R 154
Score = 29.9 bits (64), Expect = 1.7
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 9/70 (12%)
Frame = +3
Query: 189 RTKCRTSPIRSRSLRTSWLAVSRRRLQDRRSTNRAC---------QAAAPSTARQQADRR 341
RT+ R + R R + V+ RR DRR T + A T+R+Q DRR
Sbjct: 70 RTRARVTSRRQVDRRRTRARVTSRRQVDRRRTRARVTIRRQVDRRRTRARVTSRRQVDRR 129
Query: 342 RPALQGYRRR 371
R Q RRR
Sbjct: 130 RTRAQVTRRR 139
Score = 28.7 bits (61), Expect = 4.0
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = +3
Query: 189 RTKCRTSPIRSRSLRTSWLAVSRRRLQDRRSTNRACQAAAPSTARQQADRRR 344
RT+ R + R R + V+ RR DRR T A T+R+Q DRRR
Sbjct: 55 RTRARVTSRRQVDRRRTRARVTSRRQVDRRRTR------ARVTSRRQVDRRR 100
Score = 27.9 bits (59), Expect = 7.0
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +3
Query: 189 RTKCRTSPIRSRSLRTSWLAVSRRRLQDRRSTNRACQAAAPSTARQQADRRRPALQGYRR 368
RT+ + + R R + V+ RR DRR T A T+R+Q DRRR + R
Sbjct: 40 RTRAQVTSRRQVDQRRTRARVTSRRQVDRRRTR------ARVTSRRQVDRRRTRARVTSR 93
Query: 369 R 371
R
Sbjct: 94 R 94
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = +1
Query: 364 VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKTSTSSVPRRRYKKTQFW 528
+DA ++IP+ +GL S WRG ++ P + F + +T W
Sbjct: 64 IDALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLKISYGFKNNETNLW 118
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 31.9 bits (69), Expect = 0.43
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +1
Query: 283 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 462
P++ +K+ LQ + K +KG +D F++ + +GL ++G + ++ P+ AL
Sbjct: 40 PLDLLKVRLQAMNQVKP-GETAPFKGAMDCFMKTVRLEGLRGLYKGMLSPLLMATPSTAL 98
Query: 463 NF 468
F
Sbjct: 99 TF 100
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 31.5 bits (68), Expect = 0.57
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Frame = +1
Query: 256 AAVSKTAVAPIERVKLLLQVQHVSKQIAA---------DQRYKGIVDAFVRIPKEQGLLS 408
A++++ A PI+ K+ LQ+Q S +A+ D Y+G++ V + K +G+ +
Sbjct: 25 ASIAEAATIPIDTAKVRLQIQGESAVMASIAQGVRTTHDAHYRGMLGTMVTLFKTEGMKT 84
Query: 409 FWRGNFANVIR 441
++G + R
Sbjct: 85 MYKGLIPGIHR 95
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 31.1 bits (67), Expect = 0.75
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +1
Query: 262 VSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 420
+ P + VK+ Q + + I YK + AF +I K++G L W G
Sbjct: 127 IGSAIATPTDLVKIRFQAVKIGETIP----YKNMFHAFYKIAKKEGFLGLWTG 175
Score = 28.7 bits (61), Expect = 4.0
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Frame = +1
Query: 142 AATPTSTYSPSEDHI--IEQNVEPRRSGRVR*GLPGWRYLAAVSKTAVAPIERVKLLLQV 315
AA + T P+ DH + N E R G V L V+ +P++ V+
Sbjct: 183 AACISGTQIPTYDHTKHLLLNAELMREG-VALHLASALVAGFVATCVASPVDIVRTRFMT 241
Query: 316 QHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 441
Q + Y+G +D + + +G+L+ ++G F N R
Sbjct: 242 QPKDTK-GRPLVYQGTLDCIYKTVRHEGILALYKGFFPNWTR 282
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 31.1 bits (67), Expect = 0.75
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +1
Query: 265 SKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 444
+ AV P++ +K LQ+ + + + Y GI+D +I +GL +F++G +I
Sbjct: 219 ASVAVNPLDVIKTRLQLLNRPQ---GEPNYNGIIDCAKKIYSNEGLAAFYKGAVPRMIVI 275
Query: 445 FP 450
P
Sbjct: 276 AP 277
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 31.1 bits (67), Expect = 0.75
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 253 LAAVSKTAV-APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 429
+A V+ + V P++RVK +LQ++ + Y G VD RI +E G+ ++G
Sbjct: 146 IAGVATSFVLTPLDRVKCILQIE----KAFGGSSYGGPVDCLRRIYREAGVRGVYKGISV 201
Query: 430 NVIRYFP 450
+R P
Sbjct: 202 TAMRDIP 208
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/63 (23%), Positives = 29/63 (46%)
Frame = +1
Query: 283 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 462
P++ +K+ LQ + K YK D F +I + +G+ +RG ++ P +
Sbjct: 58 PLDTIKVRLQAMPLPKP-GEPWMYKNSFDCFFKIIRNEGVYYLFRGVTVPILNSIPNTTV 116
Query: 463 NFA 471
F+
Sbjct: 117 LFS 119
>SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)
Length = 553
Score = 30.7 bits (66), Expect = 1.00
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +1
Query: 265 SKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 423
S+ VA ER +L+ Q Q +D RY+G +D+F + +G L +RG+
Sbjct: 278 SRQTVACPERCGVLMASQGKRGQYMSDARYRGHLDSFRGDARYRGHLDSFRGD 330
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 30.7 bits (66), Expect = 1.00
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 277 VAPIERVKLLLQVQHVSKQIAADQRYK-GIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 450
+ P E +K LQ QH + I+ K G++D ++I + G +RG A R P
Sbjct: 124 LCPAELIKCRLQAQHQTNLISGMAGPKSGVIDVTMQIIRNDGFQGLFRGMTATWAREVP 182
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 30.3 bits (65), Expect = 1.3
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +1
Query: 283 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 462
P E VK LQ+ + AA Y+G +D + K G+L +RG + + P ++
Sbjct: 60 PTEYVKTQLQLD----EKAAKPIYRGPIDCVKKTVKGHGVLGLYRGLSSLLYGSVPKASV 115
Query: 463 NFA-FKTSTSSVPRRRYKKTQF 525
FA F+ + + K TQF
Sbjct: 116 RFAVFEYLKNKMADENGKLTQF 137
>SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -2
Query: 607 RSRGGTRSTERWLRRHHRRPDYQRSNARTAS-SCNAAE 497
RS+ +R++ RWL R R+P S+ R++S SC+ +
Sbjct: 13 RSQVRSRNSNRWLLRQQRQPQRHLSHKRSSSNSCSPGD 50
>SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35)
Length = 965
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -3
Query: 255 EIPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWGI 124
++PP R +A + + FD+ + I TR RGG ++ WG+
Sbjct: 539 DLPPDRTEVAPSFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 581
>SB_39892| Best HMM Match : TOBE (HMM E-Value=3.4)
Length = 345
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 76 RNYSKSPVQKSGVVFRDPPSACAATPTSTYSPSEDHII 189
R YS P + V +D P A TPT+ Y+ D +I
Sbjct: 133 RTYSGFPSATAKVAIKDQPLLKAITPTNQYASPGDEVI 170
>SB_13998| Best HMM Match : Kringle (HMM E-Value=0.0016)
Length = 832
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 76 RNYSKSPVQKSGVVFRDPPSACAATPTSTYSPSEDHII 189
R YS P + V +D P A TPT+ Y+ D +I
Sbjct: 344 RTYSGFPSATAKVAIKDQPLLKAITPTNQYASPGDEVI 381
>SB_25592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -3
Query: 483 TCLEGEVERLGREVPDDVGEVTTPE*KETLLLGD 382
T GE +R+G+ + + G +TTPE K+ L GD
Sbjct: 101 TGTSGERQRVGQHLEQNEGWITTPELKDLLDSGD 134
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +1
Query: 274 AVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 453
A+ PIE +K LQ+ Y+G++ + KE+G+ +F+R + P
Sbjct: 14 AMNPIEVIKQRLQMY--------GSPYRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPF 65
Query: 454 QALNF 468
Q L+F
Sbjct: 66 QTLHF 70
>SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1616
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -3
Query: 255 EIPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWGI 124
++PP R +A + FD+ + I TR RGG ++ WG+
Sbjct: 1266 DLPPDRTEVAPPFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 1308
>SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 303 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 404
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 83 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 117
>SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 303 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 404
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 217
>SB_24124| Best HMM Match : DUF1213 (HMM E-Value=3.9)
Length = 283
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +3
Query: 252 SRRRLQDRRSTNRACQAAAPSTARQQADRRRPALQGYRRRLRPHPQGAGSP 404
S+ + QD++ST++ QA +P ++QQA R+ Q ++ P +P
Sbjct: 124 SKPQDQDKQSTDQDKQATSPKISKQQAPRQASNKQQDKQATSPKTSKQQAP 174
>SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 404
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 303 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 404
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 261 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 295
>SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012)
Length = 550
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +3
Query: 303 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 404
A+ S RQQ R RP GY +R R +P+ SP
Sbjct: 84 ASGSNQRQQQARGRPQASGYNQRSRRGYPRARASP 118
>SB_6581| Best HMM Match : HEAT (HMM E-Value=3e-05)
Length = 1188
Score = 28.3 bits (60), Expect = 5.3
Identities = 34/121 (28%), Positives = 45/121 (37%), Gaps = 9/121 (7%)
Frame = +1
Query: 4 RTAIERDRSNFKKGTHL---PSVLP*LRNYSKSPVQKSGVVFRDPPSACAATPTSTYSPS 174
R I R SN HL + +P NYS S Q ++ S TPT SP
Sbjct: 736 RATINRPPSNTVDSHHLINQVTEVPTPANYSGSKTQGKKKSKKNKKSNQLQTPTDDNSPD 795
Query: 175 EDHIIEQNVEPRRSGRVR*G------LPGWRYLAAVSKTAVAPIERVKLLLQVQHVSKQI 336
+ + Q RR V G + GW + K +V P K + + H K I
Sbjct: 796 QRPVPSQPERDRRRKVVIAGDSMVKFVKGWELSNSDQKVSVMPFPGAK-VSAMDHCIKPI 854
Query: 337 A 339
A
Sbjct: 855 A 855
>SB_23424| Best HMM Match : Ank (HMM E-Value=1.1e-16)
Length = 494
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 231 RTSWLAVSRRRLQDRRSTNRACQAAAPSTARQQADRRRPAL 353
+T+ +AV L RRS +A P+T R+ + RP L
Sbjct: 337 KTAKIAVKTNNLLRRRSVAVTAPSAKPNTTRRMSTASRPTL 377
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/76 (22%), Positives = 32/76 (42%)
Frame = +1
Query: 283 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 462
P +K+ LQVQ + Y G +DAF ++ + +G+ ++G + F Q
Sbjct: 35 PANLIKIRLQVQRKTTL------YNGSLDAFTKVIRTEGVRGLYKGYLVSCAGLFAGQCY 88
Query: 463 NFAFKTSTSSVPRRRY 510
++ S + Y
Sbjct: 89 ITTYELVRSKTAQYNY 104
>SB_54542| Best HMM Match : Ribosomal_60s (HMM E-Value=0.39)
Length = 1037
Score = 27.5 bits (58), Expect = 9.3
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +3
Query: 204 TSPIRSRSLRTSWLAVSRRRLQDRRSTNRACQAAAPSTARQQADRRRPALQGYRRRLR 377
TSP+ SRS + ++ ++R ++ R C AAA + ++A AL R RLR
Sbjct: 778 TSPLTSRSRKALGKVEPNQQSEERGASCRRCAAAAGNPGAERA-AAGTALARRRCRLR 834
>SB_51958| Best HMM Match : TBC (HMM E-Value=0.00039)
Length = 491
Score = 27.5 bits (58), Expect = 9.3
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +3
Query: 213 IRSRSLRTSWLAVSRRRLQDRRSTNRACQAAAPSTARQQADRRRPALQG 359
+ S+ L S + R R + +RS NR + S RQQA RRRP+ G
Sbjct: 383 LSSQHLELSSIEADRERYK-QRSRNR--EKDESSKQRQQATRRRPSKVG 428
>SB_27882| Best HMM Match : Cob_adeno_trans (HMM E-Value=3.6)
Length = 822
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3
Query: 459 RLGREVPDDVGEVTTPE*KETLLLGD 382
R+G+ + + G +TTPE K+ L LGD
Sbjct: 525 RVGQHLEQNEGWITTPELKDLLDLGD 550
>SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 406
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 303 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 404
A+ S RQQ R RP +GY +R R +P+ +P
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARATP 217
>SB_2034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1003
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 459 RLGREVPDDVGEVTTPE*KETLLLGDADEGVDDTLVTLVG 340
R+G+ + + G +TTPE K+ L GD D ++ VG
Sbjct: 831 RVGQHLEQNEGWITTPELKDLLDSGDLDMATAREVLYSVG 870
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,583,061
Number of Sequences: 59808
Number of extensions: 417637
Number of successful extensions: 1659
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1647
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1536271375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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