Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20696
(499 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000104-1|AAH00104.1| 188|Homo sapiens transmembrane and coile... 98 2e-20
AY763589-1|AAV34755.1| 188|Homo sapiens xenogeneic cross-immune... 98 2e-20
AY359027-1|AAQ89386.1| 188|Homo sapiens STMF151 protein. 98 2e-20
AL451074-8|CAH74064.1| 188|Homo sapiens transmembrane and coile... 98 2e-20
AF277194-1|AAK07549.1| 149|Homo sapiens PNAS-136 protein. 98 2e-20
AF070626-1|AAC25388.1| 230|Homo sapiens unknown protein. 98 2e-20
AB020980-1|BAA86974.1| 188|Homo sapiens membrane protein protein. 98 2e-20
AF274935-1|AAK07514.1| 130|Homo sapiens PNAS-10 protein. 84 3e-16
BC101616-1|AAI01617.1| 1102|Homo sapiens WD repeat domain 72 pro... 30 3.9
BC101614-1|AAI01615.1| 1102|Homo sapiens WD repeat domain 72 pro... 30 3.9
>BC000104-1|AAH00104.1| 188|Homo sapiens transmembrane and
coiled-coil domains 1 protein.
Length = 188
Score = 97.9 bits (233), Expect = 2e-20
Identities = 50/85 (58%), Positives = 58/85 (68%)
Frame = +2
Query: 2 EVERQSKKLEKRKEAHGDSLDXXXXXXXXXXXXXXXXXXXDLSLVKMKSMFAIGFAFTAL 181
EVE+QSKKLEK+KE +S DLS+V+MKSMFAIGF FTAL
Sbjct: 42 EVEKQSKKLEKKKETITESAGRQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTAL 101
Query: 182 LSMFNSIFDGRVVAKLPFYPISWIQ 256
+ MFNSIFDGRVVAKLPF P+S+IQ
Sbjct: 102 MGMFNSIFDGRVVAKLPFTPLSYIQ 126
Score = 97.1 bits (231), Expect = 3e-20
Identities = 47/62 (75%), Positives = 49/62 (79%)
Frame = +1
Query: 235 LSYFMDSGLSHRNLPGDDYTDCSFIFLYILCTMSIRQNIQKLLGFAPSRAASKQGGALFA 414
LSY GLSHRNL GDD TDCSFIFLYILCTMSIRQNIQK+LG APSRAA+KQ G
Sbjct: 122 LSYIQ--GLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLG 179
Query: 415 AP 420
P
Sbjct: 180 PP 181
>AY763589-1|AAV34755.1| 188|Homo sapiens xenogeneic cross-immune
protein protein.
Length = 188
Score = 97.9 bits (233), Expect = 2e-20
Identities = 50/85 (58%), Positives = 58/85 (68%)
Frame = +2
Query: 2 EVERQSKKLEKRKEAHGDSLDXXXXXXXXXXXXXXXXXXXDLSLVKMKSMFAIGFAFTAL 181
EVE+QSKKLEK+KE +S DLS+V+MKSMFAIGF FTAL
Sbjct: 42 EVEKQSKKLEKKKETITESAGRQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTAL 101
Query: 182 LSMFNSIFDGRVVAKLPFYPISWIQ 256
+ MFNSIFDGRVVAKLPF P+S+IQ
Sbjct: 102 MGMFNSIFDGRVVAKLPFTPLSYIQ 126
Score = 97.1 bits (231), Expect = 3e-20
Identities = 47/62 (75%), Positives = 49/62 (79%)
Frame = +1
Query: 235 LSYFMDSGLSHRNLPGDDYTDCSFIFLYILCTMSIRQNIQKLLGFAPSRAASKQGGALFA 414
LSY GLSHRNL GDD TDCSFIFLYILCTMSIRQNIQK+LG APSRAA+KQ G
Sbjct: 122 LSYIQ--GLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLG 179
Query: 415 AP 420
P
Sbjct: 180 PP 181
>AY359027-1|AAQ89386.1| 188|Homo sapiens STMF151 protein.
Length = 188
Score = 97.9 bits (233), Expect = 2e-20
Identities = 50/85 (58%), Positives = 58/85 (68%)
Frame = +2
Query: 2 EVERQSKKLEKRKEAHGDSLDXXXXXXXXXXXXXXXXXXXDLSLVKMKSMFAIGFAFTAL 181
EVE+QSKKLEK+KE +S DLS+V+MKSMFAIGF FTAL
Sbjct: 42 EVEKQSKKLEKKKETITESAGRQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTAL 101
Query: 182 LSMFNSIFDGRVVAKLPFYPISWIQ 256
+ MFNSIFDGRVVAKLPF P+S+IQ
Sbjct: 102 MGMFNSIFDGRVVAKLPFTPLSYIQ 126
Score = 97.1 bits (231), Expect = 3e-20
Identities = 47/62 (75%), Positives = 49/62 (79%)
Frame = +1
Query: 235 LSYFMDSGLSHRNLPGDDYTDCSFIFLYILCTMSIRQNIQKLLGFAPSRAASKQGGALFA 414
LSY GLSHRNL GDD TDCSFIFLYILCTMSIRQNIQK+LG APSRAA+KQ G
Sbjct: 122 LSYIQ--GLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLG 179
Query: 415 AP 420
P
Sbjct: 180 PP 181
>AL451074-8|CAH74064.1| 188|Homo sapiens transmembrane and
coiled-coil domains 1 protein.
Length = 188
Score = 97.9 bits (233), Expect = 2e-20
Identities = 50/85 (58%), Positives = 58/85 (68%)
Frame = +2
Query: 2 EVERQSKKLEKRKEAHGDSLDXXXXXXXXXXXXXXXXXXXDLSLVKMKSMFAIGFAFTAL 181
EVE+QSKKLEK+KE +S DLS+V+MKSMFAIGF FTAL
Sbjct: 42 EVEKQSKKLEKKKETITESAGRQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTAL 101
Query: 182 LSMFNSIFDGRVVAKLPFYPISWIQ 256
+ MFNSIFDGRVVAKLPF P+S+IQ
Sbjct: 102 MGMFNSIFDGRVVAKLPFTPLSYIQ 126
Score = 97.1 bits (231), Expect = 3e-20
Identities = 47/62 (75%), Positives = 49/62 (79%)
Frame = +1
Query: 235 LSYFMDSGLSHRNLPGDDYTDCSFIFLYILCTMSIRQNIQKLLGFAPSRAASKQGGALFA 414
LSY GLSHRNL GDD TDCSFIFLYILCTMSIRQNIQK+LG APSRAA+KQ G
Sbjct: 122 LSYIQ--GLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLG 179
Query: 415 AP 420
P
Sbjct: 180 PP 181
>AF277194-1|AAK07549.1| 149|Homo sapiens PNAS-136 protein.
Length = 149
Score = 97.9 bits (233), Expect = 2e-20
Identities = 50/85 (58%), Positives = 58/85 (68%)
Frame = +2
Query: 2 EVERQSKKLEKRKEAHGDSLDXXXXXXXXXXXXXXXXXXXDLSLVKMKSMFAIGFAFTAL 181
EVE+QSKKLEK+KE +S DLS+V+MKSMFAIGF FTAL
Sbjct: 42 EVEKQSKKLEKKKETITESAGRQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTAL 101
Query: 182 LSMFNSIFDGRVVAKLPFYPISWIQ 256
+ MFNSIFDGRVVAKLPF P+S+IQ
Sbjct: 102 MGMFNSIFDGRVVAKLPFTPLSYIQ 126
Score = 46.8 bits (106), Expect = 4e-05
Identities = 23/30 (76%), Positives = 23/30 (76%)
Frame = +1
Query: 235 LSYFMDSGLSHRNLPGDDYTDCSFIFLYIL 324
LSY GL HRNL GDD TDCSFIFLYIL
Sbjct: 122 LSYIQ--GLPHRNLLGDDTTDCSFIFLYIL 149
>AF070626-1|AAC25388.1| 230|Homo sapiens unknown protein.
Length = 230
Score = 97.9 bits (233), Expect = 2e-20
Identities = 50/85 (58%), Positives = 58/85 (68%)
Frame = +2
Query: 2 EVERQSKKLEKRKEAHGDSLDXXXXXXXXXXXXXXXXXXXDLSLVKMKSMFAIGFAFTAL 181
EVE+QSKKLEK+KE +S DLS+V+MKSMFAIGF FTAL
Sbjct: 84 EVEKQSKKLEKKKETITESAGRQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTAL 143
Query: 182 LSMFNSIFDGRVVAKLPFYPISWIQ 256
+ MFNSIFDGRVVAKLPF P+S+IQ
Sbjct: 144 MGMFNSIFDGRVVAKLPFTPLSYIQ 168
Score = 97.1 bits (231), Expect = 3e-20
Identities = 47/62 (75%), Positives = 49/62 (79%)
Frame = +1
Query: 235 LSYFMDSGLSHRNLPGDDYTDCSFIFLYILCTMSIRQNIQKLLGFAPSRAASKQGGALFA 414
LSY GLSHRNL GDD TDCSFIFLYILCTMSIRQNIQK+LG APSRAA+KQ G
Sbjct: 164 LSYIQ--GLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLG 221
Query: 415 AP 420
P
Sbjct: 222 PP 223
>AB020980-1|BAA86974.1| 188|Homo sapiens membrane protein protein.
Length = 188
Score = 97.9 bits (233), Expect = 2e-20
Identities = 50/85 (58%), Positives = 58/85 (68%)
Frame = +2
Query: 2 EVERQSKKLEKRKEAHGDSLDXXXXXXXXXXXXXXXXXXXDLSLVKMKSMFAIGFAFTAL 181
EVE+QSKKLEK+KE +S DLS+V+MKSMFAIGF FTAL
Sbjct: 42 EVEKQSKKLEKKKETITESAGRQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTAL 101
Query: 182 LSMFNSIFDGRVVAKLPFYPISWIQ 256
+ MFNSIFDGRVVAKLPF P+S+IQ
Sbjct: 102 MGMFNSIFDGRVVAKLPFTPLSYIQ 126
Score = 97.1 bits (231), Expect = 3e-20
Identities = 47/62 (75%), Positives = 49/62 (79%)
Frame = +1
Query: 235 LSYFMDSGLSHRNLPGDDYTDCSFIFLYILCTMSIRQNIQKLLGFAPSRAASKQGGALFA 414
LSY GLSHRNL GDD TDCSFIFLYILCTMSIRQNIQK+LG APSRAA+KQ G
Sbjct: 122 LSYIQ--GLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLG 179
Query: 415 AP 420
P
Sbjct: 180 PP 181
>AF274935-1|AAK07514.1| 130|Homo sapiens PNAS-10 protein.
Length = 130
Score = 83.8 bits (198), Expect = 3e-16
Identities = 49/85 (57%), Positives = 57/85 (67%)
Frame = +2
Query: 2 EVERQSKKLEKRKEAHGDSLDXXXXXXXXXXXXXXXXXXXDLSLVKMKSMFAIGFAFTAL 181
EVE+QSKKLEK+KE +S LS+V+MKSMFAIGF FTAL
Sbjct: 42 EVEKQSKKLEKKKETITESAGR-------------------LSMVRMKSMFAIGFCFTAL 82
Query: 182 LSMFNSIFDGRVVAKLPFYPISWIQ 256
+ MFNSIFDGRVVAKLPF P+S+IQ
Sbjct: 83 MGMFNSIFDGRVVAKLPFTPLSYIQ 107
Score = 46.8 bits (106), Expect = 4e-05
Identities = 23/30 (76%), Positives = 23/30 (76%)
Frame = +1
Query: 235 LSYFMDSGLSHRNLPGDDYTDCSFIFLYIL 324
LSY GL HRNL GDD TDCSFIFLYIL
Sbjct: 103 LSYIQ--GLPHRNLLGDDTTDCSFIFLYIL 130
>BC101616-1|AAI01617.1| 1102|Homo sapiens WD repeat domain 72
protein.
Length = 1102
Score = 30.3 bits (65), Expect = 3.9
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 208 WQSSG*TSILSYFMDSGLSHRNLPGDDYTDCSFIFLYILCTMSIRQN 348
W G S + ++SGLS P D I+L++LC+ S+++N
Sbjct: 272 WTEDG-HSYIYQLLNSGLSKSIYPADGRVLKETIYLHLLCSTSVQEN 317
>BC101614-1|AAI01615.1| 1102|Homo sapiens WD repeat domain 72
protein.
Length = 1102
Score = 30.3 bits (65), Expect = 3.9
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 208 WQSSG*TSILSYFMDSGLSHRNLPGDDYTDCSFIFLYILCTMSIRQN 348
W G S + ++SGLS P D I+L++LC+ S+++N
Sbjct: 272 WTEDG-HSYIYQLLNSGLSKSIYPADGRVLKETIYLHLLCSTSVQEN 317
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,127,505
Number of Sequences: 237096
Number of extensions: 1125366
Number of successful extensions: 2150
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2143
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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