Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20696
         (499 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50044-9|CAA90361.1|  186|Caenorhabditis elegans Hypothetical pr...    94   6e-20
U23179-2|AAK68207.1|  345|Caenorhabditis elegans Serpentine rece...    30   0.81 
U58754-4|AAX22292.1|  332|Caenorhabditis elegans Serpentine rece...    29   1.9  
Z92804-1|CAB07252.1|  338|Caenorhabditis elegans Hypothetical pr...    27   5.7  
U88176-2|AAO91740.3|  550|Caenorhabditis elegans Hypothetical pr...    27   7.6  

>Z50044-9|CAA90361.1|  186|Caenorhabditis elegans Hypothetical
           protein F22B5.10 protein.
          Length = 186

 Score = 93.9 bits (223), Expect = 6e-20
 Identities = 46/85 (54%), Positives = 59/85 (69%)
 Frame = +2

Query: 2   EVERQSKKLEKRKEAHGDSLDXXXXXXXXXXXXXXXXXXXDLSLVKMKSMFAIGFAFTAL 181
           ++++++KKLEK+K+  GD+ D                   D+S+ KMKSMFAIG AFTAL
Sbjct: 39  DMDKKTKKLEKKKQEVGDTNDKNIKRKLEREEERLKATNRDMSMFKMKSMFAIGLAFTAL 98

Query: 182 LSMFNSIFDGRVVAKLPFYPISWIQ 256
           LS FNSIF+GRVVAKLPFYPI +IQ
Sbjct: 99  LSTFNSIFEGRVVAKLPFYPIGFIQ 123



 Score = 92.3 bits (219), Expect = 2e-19
 Identities = 40/58 (68%), Positives = 50/58 (86%)
 Frame = +1

Query: 256 GLSHRNLPGDDYTDCSFIFLYILCTMSIRQNIQKLLGFAPSRAASKQGGALFAAPQTQ 429
           GLSHRNL G+D TDCSFIFLYILCTM++RQN+QK+LGFAPSRA ++Q  + +A P +Q
Sbjct: 124 GLSHRNLIGEDMTDCSFIFLYILCTMTVRQNLQKILGFAPSRAMARQQSSPWAPPNSQ 181


>U23179-2|AAK68207.1|  345|Caenorhabditis elegans Serpentine
           receptor, class b (beta)protein 5 protein.
          Length = 345

 Score = 30.3 bits (65), Expect = 0.81
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -3

Query: 371 AKPSNFCMFCLMLIVHRMYKN 309
           AK  NFC  C++LI H+ +KN
Sbjct: 196 AKIGNFCCNCVLLIFHKRFKN 216


>U58754-4|AAX22292.1|  332|Caenorhabditis elegans Serpentine
           receptor, class sx protein15 protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +2

Query: 344 KTYKSCLVLHLLELLQNKVVLYLLHLRHNSNEVLN*ISNF 463
           +T K  +VL ++      ++L LLH+ H + EV++ + NF
Sbjct: 216 RTLKYLIVLFVVFRFITSIILNLLHIIHVNREVVSFVENF 255


>Z92804-1|CAB07252.1|  338|Caenorhabditis elegans Hypothetical
           protein K05D4.2 protein.
          Length = 338

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +2

Query: 263 AIGIYLVMIT-QIVLSYFCTFCVQ*ASDKTYKSCLVLHLLELLQNKVVLYLLHLRHNSNE 439
           + GI L ++T      Y C  C +     + ++C +  LL L    +  Y  ++ + SN+
Sbjct: 101 SFGILLALLTIHFYYRYICVACPKKLLRFSLRNCFLWILLVLSNFSIWFYCCYIWNGSND 160

Query: 440 VLN 448
           + N
Sbjct: 161 IKN 163


>U88176-2|AAO91740.3|  550|Caenorhabditis elegans Hypothetical
           protein F18F11.4 protein.
          Length = 550

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 357 VAWFCTFSSCFKTRWCSICCTSDTIQM 437
           V WFC  +SCF   +CS+     +I++
Sbjct: 124 VEWFCFNASCFDYLFCSMATRFGSIRL 150


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,852,937
Number of Sequences: 27780
Number of extensions: 187436
Number of successful extensions: 480
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 479
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)