Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20694
(801 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 146 2e-36
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 145 6e-36
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 128 9e-31
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 120 2e-28
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 114 1e-26
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 67 3e-12
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 53 5e-08
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 52 1e-07
SPBC409.11 |meu18||sequence orphan|Schizosaccharomyces pombe|chr... 29 1.0
SPBC29B5.04c |||conserved fungal protein|Schizosaccharomyces pom... 27 4.1
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 26 5.4
SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharom... 26 5.4
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 26 7.2
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 26 7.2
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 25 9.5
SPAC25H1.07 |||DUF1620 family protein|Schizosaccharomyces pombe|... 25 9.5
SPAC3F10.03 |||glycine tRNA-ligase|Schizosaccharomyces pombe|chr... 25 9.5
SPAC3A11.03 |||methyltransferase |Schizosaccharomyces pombe|chr ... 25 9.5
SPBC1703.15c |vps33|SPBC2A9.01c|vacuolar sorting protein Vps33|S... 25 9.5
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 146 bits (355), Expect = 2e-36
Identities = 69/85 (81%), Positives = 79/85 (92%)
Frame = +1
Query: 1 NVLRIINEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVKSTAGDT 180
NVLRIINEPTAAA+AYGLD++ +GE NVLIFDLGGGTFDVS+LTI+EG +FEVK+TAGDT
Sbjct: 166 NVLRIINEPTAAAIAYGLDRSNQGESNVLIFDLGGGTFDVSLLTIEEG-IFEVKATAGDT 224
Query: 181 HLGGEDFDNRLVNHLAEEFKRKYKK 255
HLGGEDFD+RLVNH +EFKRK KK
Sbjct: 225 HLGGEDFDSRLVNHFIQEFKRKNKK 249
Score = 102 bits (244), Expect = 7e-23
Identities = 49/85 (57%), Positives = 63/85 (74%)
Frame = +2
Query: 509 VGGSTRIPKVQTMLQNFFCGKKLNLSINPDEXXXXXXXXXXXILSGETDSKIQDVLLVDV 688
VGGSTRIP+VQ ++ +FF GK+ SINPDE +L+G+T K QD+LL+DV
Sbjct: 335 VGGSTRIPRVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAVLTGDTSEKTQDLLLLDV 394
Query: 689 APLSLGIETAGGVMTKIIERNSKIP 763
APLS+GIETAGGVMT +I+RN+ IP
Sbjct: 395 APLSMGIETAGGVMTPLIKRNTTIP 419
Score = 96.3 bits (229), Expect = 4e-21
Identities = 42/64 (65%), Positives = 58/64 (90%)
Frame = +3
Query: 318 TLSSSTEATIEIDALYEGIDFYTRVSRARFEELNADLFRGTLEPVEKALKDAKLDKSQIH 497
TLSSS +A+IEID+L+EGIDFYT ++RARFEEL ADLFR T+EPVE+ L+D+K+DK+ ++
Sbjct: 271 TLSSSAQASIEIDSLFEGIDFYTSITRARFEELCADLFRKTMEPVERVLRDSKVDKASVN 330
Query: 498 DVVL 509
++VL
Sbjct: 331 EIVL 334
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 145 bits (352), Expect = 6e-36
Identities = 69/85 (81%), Positives = 79/85 (92%)
Frame = +1
Query: 1 NVLRIINEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVKSTAGDT 180
NVLRIINEPTAAA+AYGLD++ + E NVLIFDLGGGTFDVS+LTI+EG +FEVK+TAGDT
Sbjct: 166 NVLRIINEPTAAAIAYGLDRSNQHETNVLIFDLGGGTFDVSLLTIEEG-IFEVKATAGDT 224
Query: 181 HLGGEDFDNRLVNHLAEEFKRKYKK 255
HLGGEDFD+RLVNH A+EFKRK KK
Sbjct: 225 HLGGEDFDSRLVNHFAQEFKRKNKK 249
Score = 101 bits (243), Expect = 9e-23
Identities = 50/85 (58%), Positives = 62/85 (72%)
Frame = +2
Query: 509 VGGSTRIPKVQTMLQNFFCGKKLNLSINPDEXXXXXXXXXXXILSGETDSKIQDVLLVDV 688
VGGSTRIP++Q ++ +FF GK+ SINPDE IL G+T K QD+LL+DV
Sbjct: 335 VGGSTRIPRIQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAILVGDTSEKTQDLLLLDV 394
Query: 689 APLSLGIETAGGVMTKIIERNSKIP 763
APLSLGIETAGGVMT +I+RN+ IP
Sbjct: 395 APLSLGIETAGGVMTPLIKRNTTIP 419
Score = 101 bits (242), Expect = 1e-22
Identities = 45/64 (70%), Positives = 58/64 (90%)
Frame = +3
Query: 318 TLSSSTEATIEIDALYEGIDFYTRVSRARFEELNADLFRGTLEPVEKALKDAKLDKSQIH 497
TLSSS +A+IEID+LYEGIDFYT ++RARFEEL ADLFR T+EPVEK L+D+K+DKS ++
Sbjct: 271 TLSSSAQASIEIDSLYEGIDFYTSITRARFEELCADLFRNTMEPVEKVLRDSKIDKSSVN 330
Query: 498 DVVL 509
++VL
Sbjct: 331 EIVL 334
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 128 bits (309), Expect = 9e-31
Identities = 62/84 (73%), Positives = 69/84 (82%)
Frame = +1
Query: 1 NVLRIINEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVKSTAGDT 180
NVLRIINEPTAAA+AYGLD +NVLIFDLGGGTFDVS+L I +G +FEV +TAGDT
Sbjct: 170 NVLRIINEPTAAAIAYGLDAKSDKPKNVLIFDLGGGTFDVSLLKI-QGGVFEVLATAGDT 228
Query: 181 HLGGEDFDNRLVNHLAEEFKRKYK 252
HLGGEDFDN LV H +EFKRK K
Sbjct: 229 HLGGEDFDNALVEHFIQEFKRKQK 252
Score = 84.6 bits (200), Expect = 1e-17
Identities = 43/86 (50%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +2
Query: 509 VGGSTRIPKVQTMLQNFFCGKKLNLSINPDEXXXXXXXXXXXILSGETDS-KIQDVLLVD 685
VGGSTRIPKVQ ++ +FF G+ LN SINPDE +L+ + DS K QD+LL+D
Sbjct: 339 VGGSTRIPKVQRLVSDFFDGRALNKSINPDEAVAYGAAVQAAVLTNKADSDKTQDLLLLD 398
Query: 686 VAPLSLGIETAGGVMTKIIERNSKIP 763
V PLSLG+ G V + RN+ IP
Sbjct: 399 VVPLSLGVAMEGNVFGVVCPRNTPIP 424
Score = 80.6 bits (190), Expect = 2e-16
Identities = 33/63 (52%), Positives = 50/63 (79%)
Frame = +3
Query: 321 LSSSTEATIEIDALYEGIDFYTRVSRARFEELNADLFRGTLEPVEKALKDAKLDKSQIHD 500
LSS T+ T+E+D+L GIDF + ++RARFE++NA F+ T++PV K LKD+K+ K+ +HD
Sbjct: 276 LSSVTQTTVEVDSLSNGIDFSSSITRARFEDINATTFKATIDPVAKVLKDSKVPKADVHD 335
Query: 501 VVL 509
+VL
Sbjct: 336 IVL 338
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 120 bits (290), Expect = 2e-28
Identities = 54/82 (65%), Positives = 72/82 (87%)
Frame = +1
Query: 1 NVLRIINEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVKSTAGDT 180
NV+RI+NEPTAAA+AYGLDK E++++++DLGGGTFDVS+L+ID G +FEV +T+GDT
Sbjct: 199 NVIRIVNEPTAAAIAYGLDKT-DTEKHIVVYDLGGGTFDVSLLSIDNG-VFEVLATSGDT 256
Query: 181 HLGGEDFDNRLVNHLAEEFKRK 246
HLGGEDFDNR++N+LA + RK
Sbjct: 257 HLGGEDFDNRVINYLARTYNRK 278
Score = 91.9 bits (218), Expect = 1e-19
Identities = 48/85 (56%), Positives = 60/85 (70%)
Frame = +2
Query: 509 VGGSTRIPKVQTMLQNFFCGKKLNLSINPDEXXXXXXXXXXXILSGETDSKIQDVLLVDV 688
VGGSTRIPKVQ +L++FF GKK + INPDE +LSGE S +++L+DV
Sbjct: 367 VGGSTRIPKVQELLESFF-GKKASKGINPDEAVAYGAAVQAGVLSGEEGS--DNIVLLDV 423
Query: 689 APLSLGIETAGGVMTKIIERNSKIP 763
PL+LGIET GGVMTK+I RN+ IP
Sbjct: 424 IPLTLGIETTGGVMTKLIGRNTPIP 448
Score = 75.4 bits (177), Expect = 9e-15
Identities = 35/64 (54%), Positives = 47/64 (73%)
Frame = +3
Query: 318 TLSSSTEATIEIDALYEGIDFYTRVSRARFEELNADLFRGTLEPVEKALKDAKLDKSQIH 497
TLSS IEI++ + G DF +SRA+FEE+N DLF+ TL+PVE+ LKD+ L KS+I
Sbjct: 303 TLSSQKSVRIEIESFFNGQDFSETLSRAKFEEINMDLFKKTLKPVEQVLKDSNLKKSEID 362
Query: 498 DVVL 509
D+VL
Sbjct: 363 DIVL 366
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 114 bits (275), Expect = 1e-26
Identities = 55/81 (67%), Positives = 66/81 (81%)
Frame = +1
Query: 1 NVLRIINEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVKSTAGDT 180
NVLR++NEPTAAALAYGLDK K + V +FDLGGGTFD+SIL ++ G +FEV+ST GDT
Sbjct: 212 NVLRVVNEPTAAALAYGLDK--KNDAIVAVFDLGGGTFDISILELNNG-VFEVRSTNGDT 268
Query: 181 HLGGEDFDNRLVNHLAEEFKR 243
HLGGEDFD LV H+ E FK+
Sbjct: 269 HLGGEDFDVALVRHIVETFKK 289
Score = 69.7 bits (163), Expect = 4e-13
Identities = 37/85 (43%), Positives = 53/85 (62%)
Frame = +2
Query: 509 VGGSTRIPKVQTMLQNFFCGKKLNLSINPDEXXXXXXXXXXXILSGETDSKIQDVLLVDV 688
VGG TR+P+V +++ F + S+NPDE +LSG ++D++L+DV
Sbjct: 383 VGGMTRMPRVVETVKSIFKREPAK-SVNPDEAVAIGAAIQGGVLSGH----VKDLVLLDV 437
Query: 689 APLSLGIETAGGVMTKIIERNSKIP 763
PLSLGIET GGV T++I RN+ IP
Sbjct: 438 TPLSLGIETLGGVFTRLINRNTTIP 462
Score = 44.8 bits (101), Expect = 1e-05
Identities = 20/40 (50%), Positives = 31/40 (77%)
Frame = +3
Query: 390 VSRARFEELNADLFRGTLEPVEKALKDAKLDKSQIHDVVL 509
+SRA+FE+L L R T++P ++ALKDA L S+I++V+L
Sbjct: 343 ISRAQFEKLVDPLVRRTIDPCKRALKDANLQTSEINEVIL 382
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 66.9 bits (156), Expect = 3e-12
Identities = 37/88 (42%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Frame = +1
Query: 1 NVLRIINEPTAAALAYGLDKNLKGE----RNVLIFDLGGGTFDVSILTIDEGSLFEVKST 168
N LR++N+ AAAL YG+ K E R V I D G + VSI+ G F +KST
Sbjct: 170 NPLRLMNDNAAAALTYGITKTDLPEPESPRRVAIVDFGHSNYSVSIVEFSRGQ-FHIKST 228
Query: 169 AGDTHLGGEDFDNRLVNHLAEEFKRKYK 252
D +LG + D L+++ A EFK KYK
Sbjct: 229 VCDRNLGSRNMDKALIDYFAAEFKEKYK 256
Score = 37.9 bits (84), Expect = 0.002
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +3
Query: 321 LSSSTEATIEIDALYEGIDFYTRVSRARFEELNADLFRGTLEPVEKALKDAKLDKSQIHD 500
LS++ A + ++ + ID + + R+ FEEL L P+EKAL+ A + K ++
Sbjct: 280 LSANANAPLNVEMIMNDIDASSFIKRSDFEELIKPLLERLTPPIEKALELAGIKKEDLYS 339
Query: 501 V 503
+
Sbjct: 340 I 340
Score = 34.7 bits (76), Expect = 0.015
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +2
Query: 509 VGGSTRIPKVQTMLQNFFCGKKLNLSINPDEXXXXXXXXXXXILS 643
VGG TR+P V+ ++ N+F GK L+ ++N DE ILS
Sbjct: 343 VGGCTRVPIVKEVIANYF-GKGLSFTLNQDEAVARGCALSCAILS 386
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 52.8 bits (121), Expect = 5e-08
Identities = 25/63 (39%), Positives = 41/63 (65%)
Frame = +3
Query: 321 LSSSTEATIEIDALYEGIDFYTRVSRARFEELNADLFRGTLEPVEKALKDAKLDKSQIHD 500
LS+++EA I+ L +GIDF +++R+ E L D+ +EP+ KALK A L S+I+
Sbjct: 308 LSANSEAIASIEELADGIDFRLKITRSVLESLCKDMEDAAVEPINKALKKANLTFSEINS 367
Query: 501 VVL 509
++L
Sbjct: 368 IIL 370
Score = 30.3 bits (65), Expect = 0.33
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 512 GGSTRIPKVQTMLQNFFCGKKLNLSINPDE 601
GG++RIP +Q+ L ++ K++ ++N DE
Sbjct: 372 GGASRIPFIQSTLADYVSSDKISKNVNADE 401
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 51.6 bits (118), Expect = 1e-07
Identities = 25/81 (30%), Positives = 50/81 (61%)
Frame = +1
Query: 4 VLRIINEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVKSTAGDTH 183
VL++I++P A LA + + ++ V++ + G +VS++++ +G L + ++ D +
Sbjct: 193 VLQLIHDPAAVILALMYSEEVLIDKTVVVANFGATRSEVSVVSV-KGGLMTILASVHDEN 251
Query: 184 LGGEDFDNRLVNHLAEEFKRK 246
LGGE + LVN A+EF++K
Sbjct: 252 LGGEQLTDVLVNFFAKEFEKK 272
Score = 40.3 bits (90), Expect = 3e-04
Identities = 18/64 (28%), Positives = 39/64 (60%)
Frame = +3
Query: 321 LSSSTEATIEIDALYEGIDFYTRVSRARFEELNADLFRGTLEPVEKALKDAKLDKSQIHD 500
LS+ T A+ +D+L +GIDF++ ++R R++ + + V +A++ A ++ I +
Sbjct: 298 LSNGTTASAAVDSLADGIDFHSSINRLRYDLAASATLNRMADLVTEAVEKANMEPFDISE 357
Query: 501 VVLS 512
V+L+
Sbjct: 358 VILA 361
>SPBC409.11 |meu18||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 553
Score = 28.7 bits (61), Expect = 1.0
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Frame = +3
Query: 366 EGIDFYTRVSRARFEELNA-DLFRGTL-----EPVEKALKDAKLDKSQIHDVVLSEAPPA 527
E ++F + +R RF E N +L R T+ + +EK A+L K+ D VL P
Sbjct: 175 EIVNFTSNPNRYRFYETNMQELIRKTICEKSDKAIEKTFLCAQLFKTFCEDGVLQTFQPG 234
Query: 528 FRKYKLCSKTSSVGRN*TYPSIRTKP*PTVQQSRQ 632
F + + S + + S+++ T ++S +
Sbjct: 235 FIQLDIASNLQEIKKGTKEYSLKSLEMTTTKESNE 269
>SPBC29B5.04c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 605
Score = 26.6 bits (56), Expect = 4.1
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 231 FRKMVD*SVIKVFASQVRVAGCGLHFEQRSLVDSQDG 121
F +++ SV + S + +A C +FE+RSL Q G
Sbjct: 173 FNRIMTPSVNSQYISTIGLAKCEEYFEERSLASLQRG 209
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 534 KYKLCSKTSSVGRN*TYPSIRTKP*PTVQQSRQPS 638
K+K+ K SS G+ T PS K + + +R+PS
Sbjct: 481 KHKVARKPSSTGQEPTTPSTPAKSAQSSKHARRPS 515
>SPCC1183.07 |||U3 snoRNP-associated protein
Rrp5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1690
Score = 26.2 bits (55), Expect = 5.4
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 635 ILSGETDSKIQDVLLVDVAPLSLGIETAGGVMTKIIERNSKIPANSLRHSRR 790
+LSG K +D ++VD+ G+ T G + + + SK+ N LR S +
Sbjct: 668 VLSGIVLQKTEDSVIVDLGDKVTGVITLGQLCDGDLNKCSKV-MNKLRASTK 718
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = -2
Query: 455 LDGFQSSPEQVRVQFLEAGAGDSRVEVDALIQSVNLDG 342
L+ Q +++++ +A GD R E+D +++S+ G
Sbjct: 644 LEQTQDGKPELKIKKRKAEKGDQRQELDRIVKSIKRSG 681
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 25.8 bits (54), Expect = 7.2
Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Frame = +1
Query: 106 GTFDVSIL-TIDEGSLFEVKSTAGDTHLGGEDFDNRLVNHLAEEFKRKYKKICA*TLAHS 282
G D+ L T+ S + K T+ G + D + EF+ K +K ++ +
Sbjct: 353 GLMDLDALKTVASNSKYRTKPKNCKTYGDGTELDTLDELPVDYEFELKLRKKQTTKVSGT 412
Query: 283 DASARPLSAPRGHSHPAPRPPSR 351
S S HSH PR S+
Sbjct: 413 PKSKHAGSTQEWHSHTTPRSTSK 435
>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 855
Score = 25.4 bits (53), Expect = 9.5
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Frame = +1
Query: 220 HLAEEFKRKYKKICA*TLAHSDASARPLSAPRG----HSHPAPR-PPS 348
H + F + I + ++ DASA P+S P HSH P PPS
Sbjct: 191 HASNSFNFVKRDIDSSNFSNLDASALPISPPSDFFSVHSHNLPNAPPS 238
>SPAC25H1.07 |||DUF1620 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 885
Score = 25.4 bits (53), Expect = 9.5
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +1
Query: 13 IINEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVKSTAGDTH 183
++N P A L + N +I+ + D+S L IDE FE S G H
Sbjct: 200 VLNVPENAQLLVTEKDVIIYSSNGVIYGIHVSMADISQLLIDEYKTFEWSSIPGKRH 256
>SPAC3F10.03 |||glycine tRNA-ligase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 652
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 673 DVLYLGVGLAAQDGCLDCCTVGYGFVRI 590
D+L + +G A + G +D T+GY RI
Sbjct: 309 DILEMPIGDAVKKGIVDNTTLGYFMARI 336
>SPAC3A11.03 |||methyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 247
Score = 25.4 bits (53), Expect = 9.5
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 88 IFDLGGGTFDVSILTIDEGSLFEVKSTAGDTHLGGEDFDNRLVNH 222
+ +LG GT VSIL GS+ V +T GDT + +N +N+
Sbjct: 174 VLELGAGTGLVSILCAKMGSI--VLATDGDTKVCDGVRENARLNN 216
>SPBC1703.15c |vps33|SPBC2A9.01c|vacuolar sorting protein
Vps33|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 52 LDKNLKGERNVLIFDLGGGTF 114
L N+ G+R VL+F +GG T+
Sbjct: 528 LKTNVPGKRRVLVFFIGGCTY 548
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,076,888
Number of Sequences: 5004
Number of extensions: 62022
Number of successful extensions: 271
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 258
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 388424860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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