Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20694
         (801 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein...   103   8e-24
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.51 
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    24   4.8  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    24   4.8  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    24   4.8  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        24   6.3  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   8.3  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   8.3  

>AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein 70
           protein.
          Length = 78

 Score =  103 bits (246), Expect = 8e-24
 Identities = 49/50 (98%), Positives = 50/50 (100%)
 Frame = +1

Query: 1   NVLRIINEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSL 150
           NV+RIINEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSL
Sbjct: 28  NVMRIINEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSL 77


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.5 bits (58), Expect = 0.51
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +1

Query: 271 LAHSDASARPLSAPRGHSHPAPRPPSRLTLCMRASTSTRESPAPASR 411
           ++ S      L++P  H H      + L L    S ST  SP PA+R
Sbjct: 704 VSSSPTGGHHLASPSPHHHLTSPHGAPLALTSSKSASTHPSPHPATR 750


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 388 ESPAPASRN*TRTCSGELWNPSRRH 462
           E+P   +R+   + S  LWN ++RH
Sbjct: 327 ENPLTTNRSAVDSLSSNLWNYTKRH 351


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
 Frame = +1

Query: 310 PRGHSHPAPRPPSRLTLCMRASTSTRESPAPASRN*TRTCSGELWNPSRRHSRMLNSTRV 489
           P+ H+HP+   P+ +   + A    ++S              +L +P+ + +R LNS  +
Sbjct: 368 PQPHTHPSYGSPAEIPKHISA-LGAKQSKMEVME------LSDLHHPNCKMNRKLNSGDL 420

Query: 490 RSTTWSCRRLHPHSESTNYAPKL-LLWEETELIHQSGRSRSL 612
                SCRR    S+S   +P+     E  E I +  R+  L
Sbjct: 421 GIGADSCRRESESSDSILLSPEASKATEAVEFIAEHLRNEDL 462


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
 Frame = +1

Query: 289  SARPLSAP-RGHSHPAPRPPSR 351
            SAR  S   RG  HP P PP R
Sbjct: 1112 SARNTSEEQRGRRHPTPSPPPR 1133


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 343 PSRLTLCMRASTSTRESPAPASRN 414
           P+R    +    STR SPAP SR+
Sbjct: 17  PNRYRRIVSGLDSTRGSPAPGSRH 40


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -2

Query: 218 LTSRLSKSSPPRCVSPAVDFTSNNDPSSIVRMDTSKVPPP 99
           L S  S ++    +SP  +F SN    S++ ++ +  PPP
Sbjct: 426 LKSPKSPTATTHLISPPAEF-SNGSSKSLLLLNGNGPPPP 464


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 369 PHTERQSRWWPRCWMRVSSWRAQR 298
           P   R +RW  R    V SW AQ+
Sbjct: 891 PGASRYARWAHRLIPEVHSWMAQK 914


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 793,785
Number of Sequences: 2352
Number of extensions: 16769
Number of successful extensions: 31
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)