Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20692
         (748 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   3.4  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   6.0  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   6.0  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   7.9  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   7.9  

>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 19/73 (26%), Positives = 32/73 (43%)
 Frame = -3

Query: 260 CVAANKKIEVMLNGLTALKEQYSHLSQVEVDEVASLVCHIRAKITTHDAMPGRIVFLVKF 81
           C    KK++ +L+    L+  +  L+  E DEV      I   +  H+    +     +F
Sbjct: 172 CDTILKKVDDILSQAYKLEASFDDLATYETDEV-----QIFIDVVQHNRPEFK---AARF 223

Query: 80  FLDDAAMSFSMLN 42
           F  D +  FS+LN
Sbjct: 224 FSIDRSTLFSVLN 236


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 436 NQKFTMLDINCVLPLHLVPGACGV 507
           N KFT LD++  L  HL+    G+
Sbjct: 37  NGKFTALDVDPTLCTHLLYAFVGL 60


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +3

Query: 114 CIVGRNFGSYVTHETRHFIYFYLGQ 188
           C+ G     + TH T H  Y Y G+
Sbjct: 70  CLNGATCQDHTTHYTCHCPYGYTGK 94


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 430 LFNQKFTMLDINCVLPLHLVPGACGV 507
           L N KFT+ DI+  L  HL+    G+
Sbjct: 34  LNNGKFTVEDIDPTLCTHLIYSFVGL 59


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +1

Query: 592 LVNYYPRLI 618
           LVN+YPRLI
Sbjct: 89  LVNWYPRLI 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,732
Number of Sequences: 336
Number of extensions: 3389
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)