Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20692
         (748 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U48847-1|AAD00073.1|   89|Drosophila melanogaster 8kd dynein lig...   112   4e-25
AY069718-1|AAL39863.1|   89|Drosophila melanogaster LP02196p pro...   112   4e-25
AE014134-242|AAN10465.1|   89|Drosophila melanogaster CG5450-PB,...   112   4e-25
AE014134-241|AAF51383.1|   89|Drosophila melanogaster CG5450-PA,...   112   4e-25
U48848-1|AAD00074.1|   89|Drosophila melanogaster 8kd dynein lig...   112   6e-25
U48846-1|AAD00072.1|   89|Drosophila melanogaster 8kd dynein lig...   112   6e-25
U32855-1|AAB04148.1|   89|Drosophila melanogaster cytoplasmic dy...   112   6e-25
AE014298-666|AAN09128.1|   89|Drosophila melanogaster CG6998-PD,...   112   6e-25
AE014298-665|AAN09127.1|   89|Drosophila melanogaster CG6998-PC,...   112   6e-25
AE014298-664|AAN09126.1|   89|Drosophila melanogaster CG6998-PB,...   112   6e-25
AE014298-663|AAF45975.1|   89|Drosophila melanogaster CG6998-PA,...   112   6e-25
AE013599-1402|AAF58574.1|  104|Drosophila melanogaster CG8407-PA...    51   1e-06
AE014134-2863|AAF53626.1| 4010|Drosophila melanogaster CG5526-PA...    29   5.1  
BT011119-1|AAR82786.1| 1066|Drosophila melanogaster LD15941p pro...    29   6.7  
AE013599-815|AAF58971.2| 2408|Drosophila melanogaster CG8014-PA ...    29   6.7  

>U48847-1|AAD00073.1|   89|Drosophila melanogaster 8kd dynein light
           chain protein.
          Length = 89

 Score =  112 bits (270), Expect = 4e-25
 Identities = 49/54 (90%), Positives = 50/54 (92%)
 Frame = +3

Query: 54  KGHSCIIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 215
           K  +  IKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 36  KDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89



 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = +1

Query: 1   QQDAVDCATQALEKFNIEKDIAASSRKNLTR 93
           QQDAVDCATQALEK+NIEKDIAA  +K   +
Sbjct: 18  QQDAVDCATQALEKYNIEKDIAAFIKKEFDK 48


>AY069718-1|AAL39863.1|   89|Drosophila melanogaster LP02196p
           protein.
          Length = 89

 Score =  112 bits (270), Expect = 4e-25
 Identities = 49/54 (90%), Positives = 50/54 (92%)
 Frame = +3

Query: 54  KGHSCIIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 215
           K  +  IKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 36  KDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89



 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = +1

Query: 1   QQDAVDCATQALEKFNIEKDIAASSRKNLTR 93
           QQDAVDCATQALEK+NIEKDIAA  +K   +
Sbjct: 18  QQDAVDCATQALEKYNIEKDIAAFIKKEFDK 48


>AE014134-242|AAN10465.1|   89|Drosophila melanogaster CG5450-PB,
           isoform B protein.
          Length = 89

 Score =  112 bits (270), Expect = 4e-25
 Identities = 49/54 (90%), Positives = 50/54 (92%)
 Frame = +3

Query: 54  KGHSCIIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 215
           K  +  IKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 36  KDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89



 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = +1

Query: 1   QQDAVDCATQALEKFNIEKDIAASSRKNLTR 93
           QQDAVDCATQALEK+NIEKDIAA  +K   +
Sbjct: 18  QQDAVDCATQALEKYNIEKDIAAFIKKEFDK 48


>AE014134-241|AAF51383.1|   89|Drosophila melanogaster CG5450-PA,
           isoform A protein.
          Length = 89

 Score =  112 bits (270), Expect = 4e-25
 Identities = 49/54 (90%), Positives = 50/54 (92%)
 Frame = +3

Query: 54  KGHSCIIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 215
           K  +  IKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 36  KDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89



 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = +1

Query: 1   QQDAVDCATQALEKFNIEKDIAASSRKNLTR 93
           QQDAVDCATQALEK+NIEKDIAA  +K   +
Sbjct: 18  QQDAVDCATQALEKYNIEKDIAAFIKKEFDK 48


>U48848-1|AAD00074.1|   89|Drosophila melanogaster 8kd dynein light
           chain protein.
          Length = 89

 Score =  112 bits (269), Expect = 6e-25
 Identities = 49/54 (90%), Positives = 50/54 (92%)
 Frame = +3

Query: 54  KGHSCIIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 215
           K  +  IKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 36  KDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89



 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = +1

Query: 1   QQDAVDCATQALEKFNIEKDIAASSRKNLTR 93
           QQDAVDCATQALEK+NIEKDIAA  +K   +
Sbjct: 18  QQDAVDCATQALEKYNIEKDIAAYIKKEFDK 48


>U48846-1|AAD00072.1|   89|Drosophila melanogaster 8kd dynein light
           chain protein.
          Length = 89

 Score =  112 bits (269), Expect = 6e-25
 Identities = 49/54 (90%), Positives = 50/54 (92%)
 Frame = +3

Query: 54  KGHSCIIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 215
           K  +  IKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 36  KDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89



 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = +1

Query: 1   QQDAVDCATQALEKFNIEKDIAASSRKNLTR 93
           QQDAVDCATQALEK+NIEKDIAA  +K   +
Sbjct: 18  QQDAVDCATQALEKYNIEKDIAAYIKKEFDK 48


>U32855-1|AAB04148.1|   89|Drosophila melanogaster cytoplasmic
           dynein light chain 1 protein.
          Length = 89

 Score =  112 bits (269), Expect = 6e-25
 Identities = 49/54 (90%), Positives = 50/54 (92%)
 Frame = +3

Query: 54  KGHSCIIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 215
           K  +  IKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 36  KDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89



 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = +1

Query: 1   QQDAVDCATQALEKFNIEKDIAASSRKNLTR 93
           QQDAVDCATQALEK+NIEKDIAA  +K   +
Sbjct: 18  QQDAVDCATQALEKYNIEKDIAAYIKKEFDK 48


>AE014298-666|AAN09128.1|   89|Drosophila melanogaster CG6998-PD,
           isoform D protein.
          Length = 89

 Score =  112 bits (269), Expect = 6e-25
 Identities = 49/54 (90%), Positives = 50/54 (92%)
 Frame = +3

Query: 54  KGHSCIIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 215
           K  +  IKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 36  KDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89



 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = +1

Query: 1   QQDAVDCATQALEKFNIEKDIAASSRKNLTR 93
           QQDAVDCATQALEK+NIEKDIAA  +K   +
Sbjct: 18  QQDAVDCATQALEKYNIEKDIAAYIKKEFDK 48


>AE014298-665|AAN09127.1|   89|Drosophila melanogaster CG6998-PC,
           isoform C protein.
          Length = 89

 Score =  112 bits (269), Expect = 6e-25
 Identities = 49/54 (90%), Positives = 50/54 (92%)
 Frame = +3

Query: 54  KGHSCIIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 215
           K  +  IKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 36  KDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89



 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = +1

Query: 1   QQDAVDCATQALEKFNIEKDIAASSRKNLTR 93
           QQDAVDCATQALEK+NIEKDIAA  +K   +
Sbjct: 18  QQDAVDCATQALEKYNIEKDIAAYIKKEFDK 48


>AE014298-664|AAN09126.1|   89|Drosophila melanogaster CG6998-PB,
           isoform B protein.
          Length = 89

 Score =  112 bits (269), Expect = 6e-25
 Identities = 49/54 (90%), Positives = 50/54 (92%)
 Frame = +3

Query: 54  KGHSCIIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 215
           K  +  IKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 36  KDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89



 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = +1

Query: 1   QQDAVDCATQALEKFNIEKDIAASSRKNLTR 93
           QQDAVDCATQALEK+NIEKDIAA  +K   +
Sbjct: 18  QQDAVDCATQALEKYNIEKDIAAYIKKEFDK 48


>AE014298-663|AAF45975.1|   89|Drosophila melanogaster CG6998-PA,
           isoform A protein.
          Length = 89

 Score =  112 bits (269), Expect = 6e-25
 Identities = 49/54 (90%), Positives = 50/54 (92%)
 Frame = +3

Query: 54  KGHSCIIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 215
           K  +  IKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG
Sbjct: 36  KDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89



 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = +1

Query: 1   QQDAVDCATQALEKFNIEKDIAASSRKNLTR 93
           QQDAVDCATQALEK+NIEKDIAA  +K   +
Sbjct: 18  QQDAVDCATQALEKYNIEKDIAAYIKKEFDK 48


>AE013599-1402|AAF58574.1|  104|Drosophila melanogaster CG8407-PA
           protein.
          Length = 104

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 22/48 (45%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
 Frame = +3

Query: 69  IIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIY-FYLGQVAILLFK 209
           IIK+  DKK+   WH +VG  FG  V++ET + +Y F+ G +AI+L+K
Sbjct: 55  IIKENMDKKFGIYWHVVVGEGFGFEVSYETENILYLFFAGNLAIVLWK 102


>AE014134-2863|AAF53626.1| 4010|Drosophila melanogaster CG5526-PA
           protein.
          Length = 4010

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 16/57 (28%), Positives = 30/57 (52%)
 Frame = +2

Query: 2   SKMLLTVQLKRSRNLTLKRT*LHHQERI*QEIQSYLALHRGS*FWLVCDTRDSPLHL 172
           ++M LTV    +  + LK   +H +E +  E+++ L ++     WL+  T  SPL +
Sbjct: 562 ARMALTVPKDTAELMQLKAYVVHAEENLVPEMEARLKVNMSEILWLMDHTLYSPLEI 618


>BT011119-1|AAR82786.1| 1066|Drosophila melanogaster LD15941p
           protein.
          Length = 1066

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = -3

Query: 260 CVAANKKIEVMLNGLTALKEQYSHLSQVEVDEVASLVCHIRAKITTHDAMPGRIVFLVKF 81
           CV+     E++ N L ALK+     SQV+V E  S + +++  I    A  G  ++L+  
Sbjct: 632 CVSEVAACEILGNYLVALKDPELRASQVKVLETLSGLMNVQEMIKEAQA-KGATIYLLDM 690

Query: 80  F 78
           F
Sbjct: 691 F 691


>AE013599-815|AAF58971.2| 2408|Drosophila melanogaster CG8014-PA
            protein.
          Length = 2408

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = -3

Query: 260  CVAANKKIEVMLNGLTALKEQYSHLSQVEVDEVASLVCHIRAKITTHDAMPGRIVFLVKF 81
            CV+     E++ N L ALK+     SQV+V E  S + +++  I    A  G  ++L+  
Sbjct: 1974 CVSEVAACEILGNYLVALKDPELRASQVKVLETLSGLMNVQEMIKEAQA-KGATIYLLDM 2032

Query: 80   F 78
            F
Sbjct: 2033 F 2033


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,524,886
Number of Sequences: 53049
Number of extensions: 562266
Number of successful extensions: 1066
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1066
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)