Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20691
         (459 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68338-1|CAA92757.1|  134|Caenorhabditis elegans Hypothetical pr...    93   1e-19
U39645-5|AAU05591.1|  345|Caenorhabditis elegans Hypothetical pr...    27   5.0  
U39645-4|AAU05592.1|  341|Caenorhabditis elegans Hypothetical pr...    27   5.0  
Z66494-10|CAF31472.1|  500|Caenorhabditis elegans Hypothetical p...    27   6.6  
Z66494-9|CAA91260.1|  502|Caenorhabditis elegans Hypothetical pr...    27   6.6  
Z81449-6|CAB03764.2|  489|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z81449-5|CAB03762.2|  488|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z75712-8|CAB00047.1|  319|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical pr...    27   8.7  
U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domai...    27   8.7  
AF022979-10|AAB69905.3|  651|Caenorhabditis elegans Nematode ast...    27   8.7  

>Z68338-1|CAA92757.1|  134|Caenorhabditis elegans Hypothetical
           protein T24B8.1 protein.
          Length = 134

 Score = 92.7 bits (220), Expect = 1e-19
 Identities = 37/63 (58%), Positives = 52/63 (82%)
 Frame = +2

Query: 65  IVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLP 244
           +VKK+  +F RH+SDRY ++  +WRKP+GIDNRVRRRF+G   MP IG+GS+++TR +LP
Sbjct: 11  VVKKKLTKFKRHESDRYRRVAPSWRKPKGIDNRVRRRFRGMRAMPTIGHGSDRRTRFVLP 70

Query: 245 NGF 253
           NG+
Sbjct: 71  NGY 73



 Score = 81.4 bits (192), Expect = 3e-16
 Identities = 39/65 (60%), Positives = 51/65 (78%)
 Frame = +1

Query: 241 PKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 420
           P    KVLV NVK+L++L+MQ+ KY  EI HGVS+K RK IVERA QL+I++TN  ARLR
Sbjct: 70  PNGYKKVLVQNVKDLDMLLMQSYKYIGEIGHGVSAKSRKGIVERAAQLNIKLTNGNARLR 129

Query: 421 SQENE 435
           ++E+E
Sbjct: 130 TEESE 134


>U39645-5|AAU05591.1|  345|Caenorhabditis elegans Hypothetical
           protein C14F11.4a protein.
          Length = 345

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = +2

Query: 53  YRPTIVKKRT--KRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKK 226
           Y P + KK    +RFI   ++R+D + RN   P     R  +  + Q L+ +  Y S+ +
Sbjct: 4   YPPLVTKKEIIYRRFIDDHNERFDNIVRN---PTSYPPRAPKPERPQNLVVSHNYHSDVE 60

Query: 227 TRHML 241
             + L
Sbjct: 61  AEYQL 65


>U39645-4|AAU05592.1|  341|Caenorhabditis elegans Hypothetical
           protein C14F11.4b protein.
          Length = 341

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = +2

Query: 53  YRPTIVKKRT--KRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKK 226
           Y P + KK    +RFI   ++R+D + RN   P     R  +  + Q L+ +  Y S+ +
Sbjct: 4   YPPLVTKKEIIYRRFIDDHNERFDNIVRN---PTSYPPRAPKPERPQNLVVSHNYHSDVE 60

Query: 227 TRHML 241
             + L
Sbjct: 61  AEYQL 65


>Z66494-10|CAF31472.1|  500|Caenorhabditis elegans Hypothetical
           protein C34C6.6b protein.
          Length = 500

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 17/54 (31%), Positives = 23/54 (42%)
 Frame = +1

Query: 220 QEDPSYAPKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQ 381
           Q+DP  A  W    L H   E + L MQ  + C +I  G       L V +A +
Sbjct: 244 QKDPQDARAWCKLGLAHAENEKDQLAMQAFQKCLQIDAGNKEALLGLSVSQANE 297


>Z66494-9|CAA91260.1|  502|Caenorhabditis elegans Hypothetical
           protein C34C6.6a protein.
          Length = 502

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 17/54 (31%), Positives = 23/54 (42%)
 Frame = +1

Query: 220 QEDPSYAPKWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQ 381
           Q+DP  A  W    L H   E + L MQ  + C +I  G       L V +A +
Sbjct: 246 QKDPQDARAWCKLGLAHAENEKDQLAMQAFQKCLQIDAGNKEALLGLSVSQANE 299


>Z81449-6|CAB03764.2|  489|Caenorhabditis elegans Hypothetical
           protein C46F11.5b protein.
          Length = 489

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 13/51 (25%), Positives = 29/51 (56%)
 Frame = +1

Query: 244 KWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRV 396
           +W+P ++ + VK     +   R+ C E+ +G+ +     IVER ++++ R+
Sbjct: 174 RWVPPLIAY-VKHF---IFNFRESCRELVNGIKNWIHVAIVERTKRVAQRI 220


>Z81449-5|CAB03762.2|  488|Caenorhabditis elegans Hypothetical
           protein C46F11.5a protein.
          Length = 488

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 13/51 (25%), Positives = 29/51 (56%)
 Frame = +1

Query: 244 KWIPKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRV 396
           +W+P ++ + VK     +   R+ C E+ +G+ +     IVER ++++ R+
Sbjct: 174 RWVPPLIAY-VKHF---IFNFRESCRELVNGIKNWIHVAIVERTKRVAQRI 220


>Z75712-8|CAB00047.1|  319|Caenorhabditis elegans Hypothetical
           protein K04G2.10 protein.
          Length = 319

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 31  QDGYKTCLQADNRQKEDEEIYQASIGSL*QT*EEL 135
           QD  K   + D+RQKE  E Y+  IGS+ +  E++
Sbjct: 238 QDMVKYMEENDDRQKESIEKYKRKIGSMKKVIEKM 272


>Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical protein
            K07G5.3 protein.
          Length = 1202

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -3

Query: 178  EPPADSVVN-TSRFTPIPLKFVIAIRLMPDKSLRPLFDDCRPVNRSYSHLV 29
            E P +S+   T R++ +P  +++ +R+  ++ ++  FD+ R       HLV
Sbjct: 1058 EEPLESIQTATVRYSKLPEDWIVELRISLEREIKIRFDESRKHAIPQWHLV 1108


>U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domain
           protein protein 1 protein.
          Length = 709

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +2

Query: 20  KETYKMAIRPVYRPTIVKKRTKR-FIRHQSDRYDKLKRNWRKPRGIDNRVRRR 175
           K+ +  A++P +R TI+ +R K   ++   DRY K K+ + K   +    +RR
Sbjct: 387 KKKHMTALKP-WRDTILIERGKMPKLKKIRDRYIKQKKKFNKENRLSKECKRR 438


>AF022979-10|AAB69905.3|  651|Caenorhabditis elegans Nematode
           astacin protease protein32 protein.
          Length = 651

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = -1

Query: 423 GAEASGRIRHSDAELLGSFHDQLPLLRRDTMSDLCAVLPVLHHQDF 286
           G E +G   H  A  LG FH Q+   R D ++     +P    Q+F
Sbjct: 282 GCEVTGTAAHEIAHTLGLFHTQMRSDRDDYVTIDLTDVPESSQQNF 327


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,233,930
Number of Sequences: 27780
Number of extensions: 203417
Number of successful extensions: 606
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)