Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20689
(703 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 95 2e-18
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 89 1e-16
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 88 2e-16
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 77 4e-13
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 77 4e-13
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 75 2e-12
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 75 2e-12
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 74 4e-12
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 73 7e-12
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 73 7e-12
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 73 9e-12
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 73 9e-12
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 72 2e-11
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 72 2e-11
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 72 2e-11
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 71 2e-11
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 71 4e-11
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 70 5e-11
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 69 8e-11
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 67 3e-10
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 66 6e-10
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 66 6e-10
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 64 2e-09
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 64 3e-09
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 64 4e-09
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 64 4e-09
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 64 4e-09
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 64 4e-09
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 63 6e-09
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 63 7e-09
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 62 2e-08
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 62 2e-08
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 60 4e-08
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 60 7e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 9e-08
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 57 4e-07
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 56 1e-06
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 54 3e-06
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 53 8e-06
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 52 2e-05
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 50 4e-05
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 48 3e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 47 4e-04
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 46 7e-04
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 46 9e-04
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 44 0.003
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 43 0.008
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 42 0.015
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 41 0.026
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 41 0.026
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 40 0.078
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 39 0.14
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 38 0.24
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 38 0.32
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 37 0.55
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 37 0.55
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 37 0.55
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 37 0.55
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 36 0.73
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 36 1.3
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 35 1.7
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 35 1.7
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 35 1.7
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 35 1.7
UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 34 2.9
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 33 5.1
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 33 9.0
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 33 9.0
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 94.7 bits (225), Expect = 2e-18
Identities = 62/150 (41%), Positives = 64/150 (42%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 68 PRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 127
Query: 433 ISSXXXXXXXXXXXXXXXXXXXSFDHYPYLYEL*GXXXXXXXXXXXXXXXXXXXX*QIET 612
ISS SFD P G
Sbjct: 128 ISSILGAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRN 187
Query: 613 *IHHFLILLEEETQFLYPHLF*FFGHPEVY 702
F LY HLF FFGHPEVY
Sbjct: 188 LNTSFFDPAGGGDPILYQHLFWFFGHPEVY 217
Score = 74.1 bits (174), Expect = 3e-12
Identities = 36/58 (62%), Positives = 39/58 (67%)
Frame = +3
Query: 510 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIF 683
+PLF+ AVGITA AGAIT+LLTDRNLNTSFFDPAGGGDPI F
Sbjct: 154 MPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFF 211
Score = 66.9 bits (156), Expect = 5e-10
Identities = 33/55 (60%), Positives = 36/55 (65%)
Frame = +2
Query: 89 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 253
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AF
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAF 67
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 89.0 bits (211), Expect = 1e-16
Identities = 59/149 (39%), Positives = 63/149 (42%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 92 PRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 151
Query: 433 ISSXXXXXXXXXXXXXXXXXXXSFDHYPYLYEL*GXXXXXXXXXXXXXXXXXXXX*QIET 612
ISS SFD P G
Sbjct: 152 ISSILGAINFITTIINMRMNNLSFDQMPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRN 211
Query: 613 *IHHFLILLEEETQFLYPHLF*FFGHPEV 699
F LY HLF FFGHP++
Sbjct: 212 LNTSFFDPAGGGDPILYQHLFWFFGHPKL 240
Score = 81.8 bits (193), Expect = 1e-14
Identities = 44/84 (52%), Positives = 46/84 (54%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
NHKDIGTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 8 NHKDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMV 67
Query: 182 XXXXXXXXXN*LVPLILGAPDIAF 253
N LVPL+LGAPD+AF
Sbjct: 68 MPIMIGGFGNWLVPLMLGAPDMAF 91
Score = 77.0 bits (181), Expect = 4e-13
Identities = 38/58 (65%), Positives = 40/58 (68%)
Frame = +3
Query: 510 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIF 683
+PLFV AVGITAF AGAIT+LLTDRNLNTSFFDPAGGGDPI F
Sbjct: 178 MPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFF 235
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 88.2 bits (209), Expect = 2e-16
Identities = 49/93 (52%), Positives = 56/93 (60%)
Frame = -2
Query: 297 KGGG*ESKSYIIYSWNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 118
K GG + NA+SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 117 PINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 19
PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
Score = 85.4 bits (202), Expect = 1e-15
Identities = 40/63 (63%), Positives = 47/63 (74%)
Frame = -3
Query: 440 DEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLILF 261
+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG +QNL+LF
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLF 137
Query: 260 IRG 252
IRG
Sbjct: 138 IRG 140
Score = 72.9 bits (171), Expect = 7e-12
Identities = 35/52 (67%), Positives = 40/52 (76%)
Frame = -1
Query: 655 IGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGNDQM 500
IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G M
Sbjct: 6 IGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSM 57
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 77.0 bits (181), Expect = 4e-13
Identities = 40/84 (47%), Positives = 45/84 (53%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
NHKDIGTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 12 NHKDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMV 71
Query: 182 XXXXXXXXXN*LVPLILGAPDIAF 253
N LVPL++GAPD+AF
Sbjct: 72 MPIMIGGFGNWLVPLMIGAPDMAF 95
Score = 76.2 bits (179), Expect = 7e-13
Identities = 39/63 (61%), Positives = 43/63 (68%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAG
Sbjct: 96 PRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAG 155
Query: 433 ISS 441
ISS
Sbjct: 156 ISS 158
Score = 62.9 bits (146), Expect = 7e-09
Identities = 32/57 (56%), Positives = 35/57 (61%)
Frame = +3
Query: 513 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIF 683
PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPI F
Sbjct: 183 PLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFF 239
Score = 33.5 bits (73), Expect = 5.1
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1
Query: 658 LYPHLF*FFGHPEVY 702
LY HLF FFGHPEVY
Sbjct: 231 LYQHLFWFFGHPEVY 245
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 77.0 bits (181), Expect = 4e-13
Identities = 38/63 (60%), Positives = 42/63 (66%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NN+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG
Sbjct: 78 PRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAG 137
Query: 433 ISS 441
+SS
Sbjct: 138 VSS 140
Score = 64.9 bits (151), Expect = 2e-09
Identities = 34/57 (59%), Positives = 38/57 (66%)
Frame = +3
Query: 516 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIFW 686
LFV +V ITA AGAIT+LLTDRN NTSFFDPAGGGDPI + +FW
Sbjct: 166 LFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPIL---YQHLFW 219
Score = 60.5 bits (140), Expect = 4e-08
Identities = 29/55 (52%), Positives = 34/55 (61%)
Frame = +2
Query: 89 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 253
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AF
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAF 77
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 74.5 bits (175), Expect = 2e-12
Identities = 39/84 (46%), Positives = 44/84 (52%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
NHKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 11 NHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMV 70
Query: 182 XXXXXXXXXN*LVPLILGAPDIAF 253
N LVPL++GAPD+AF
Sbjct: 71 MPVMIGGFGNWLVPLMIGAPDMAF 94
Score = 72.9 bits (171), Expect = 7e-12
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 154
Query: 433 ISS 441
+SS
Sbjct: 155 VSS 157
Score = 62.5 bits (145), Expect = 1e-08
Identities = 31/57 (54%), Positives = 35/57 (61%)
Frame = +3
Query: 513 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIF 683
PLFV +V +TA A IT+LLTDRNLNT+FFDPAGGGDPI F
Sbjct: 182 PLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFF 238
Score = 33.5 bits (73), Expect = 5.1
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1
Query: 658 LYPHLF*FFGHPEVY 702
LY HLF FFGHPEVY
Sbjct: 230 LYQHLFWFFGHPEVY 244
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 74.5 bits (175), Expect = 2e-12
Identities = 39/84 (46%), Positives = 44/84 (52%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
NHKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 11 NHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMV 70
Query: 182 XXXXXXXXXN*LVPLILGAPDIAF 253
N LVPL++GAPD+AF
Sbjct: 71 MPILIGGFGNWLVPLMIGAPDMAF 94
Score = 72.9 bits (171), Expect = 7e-12
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 154
Query: 433 ISS 441
+SS
Sbjct: 155 VSS 157
Score = 63.7 bits (148), Expect = 4e-09
Identities = 32/57 (56%), Positives = 35/57 (61%)
Frame = +3
Query: 513 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIF 683
PLFV AV +TA A IT+LLTDRNLNT+FFDPAGGGDPI F
Sbjct: 182 PLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFF 238
Score = 33.5 bits (73), Expect = 5.1
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1
Query: 658 LYPHLF*FFGHPEVY 702
LY HLF FFGHPEVY
Sbjct: 230 LYQHLFWFFGHPEVY 244
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 73.7 bits (173), Expect = 4e-12
Identities = 37/63 (58%), Positives = 42/63 (66%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NNI F +VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG
Sbjct: 96 PRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAG 155
Query: 433 ISS 441
+SS
Sbjct: 156 LSS 158
Score = 68.5 bits (160), Expect = 1e-10
Identities = 38/100 (38%), Positives = 47/100 (47%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
NHKDIG+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 12 NHKDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLV 71
Query: 182 XXXXXXXXXN*LVPLILGAPDIAFHE*II*DFDSYPPPLY 301
N VPL++GAPD+AF F PP L+
Sbjct: 72 MPTMIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALF 111
Score = 63.3 bits (147), Expect = 6e-09
Identities = 32/58 (55%), Positives = 36/58 (62%)
Frame = +3
Query: 510 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIF 683
+PLFV +V ITA AGAIT+LLTDR NT+FFDPAGGGDPI F
Sbjct: 182 IPLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFF 239
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 72.9 bits (171), Expect = 7e-12
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NN+ F +E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 84 PRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 143
Query: 433 ISS 441
ISS
Sbjct: 144 ISS 146
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/83 (44%), Positives = 43/83 (51%)
Frame = +2
Query: 5 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 184
HKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 1 HKDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 60
Query: 185 XXXXXXXXN*LVPLILGAPDIAF 253
N L+PL++GAPD+AF
Sbjct: 61 PIMIGGFGNWLIPLMIGAPDMAF 83
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/41 (60%), Positives = 27/41 (65%)
Frame = +3
Query: 513 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 635
PLFV AV ITA A IT+LLTDRNLNT+FFDP
Sbjct: 171 PLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 72.9 bits (171), Expect = 7e-12
Identities = 38/84 (45%), Positives = 44/84 (52%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
NHKDIGTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 11 NHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMV 70
Query: 182 XXXXXXXXXN*LVPLILGAPDIAF 253
N LVPL++GAPD+AF
Sbjct: 71 MPIMIGGFGNWLVPLMIGAPDMAF 94
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/63 (55%), Positives = 41/63 (65%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NN+ F +VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAG 154
Query: 433 ISS 441
+SS
Sbjct: 155 VSS 157
Score = 62.9 bits (146), Expect = 7e-09
Identities = 32/57 (56%), Positives = 35/57 (61%)
Frame = +3
Query: 513 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIF 683
PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPI F
Sbjct: 182 PLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFF 238
Score = 33.5 bits (73), Expect = 5.1
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1
Query: 658 LYPHLF*FFGHPEVY 702
LY HLF FFGHPEVY
Sbjct: 230 LYQHLFWFFGHPEVY 244
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 72.5 bits (170), Expect = 9e-12
Identities = 38/63 (60%), Positives = 41/63 (65%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 433 ISS 441
ISS
Sbjct: 156 ISS 158
Score = 56.8 bits (131), Expect = 5e-07
Identities = 28/58 (48%), Positives = 34/58 (58%)
Frame = +3
Query: 510 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIF 683
LPLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPI F
Sbjct: 182 LPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFF 239
Score = 40.7 bits (91), Expect = 0.034
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 175
N KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 10 NAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFF 69
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAF 253
N L+PL++GA D AF
Sbjct: 70 LVMPALIGGFGNYLLPLMIGATDTAF 95
Score = 33.5 bits (73), Expect = 5.1
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1
Query: 658 LYPHLF*FFGHPEVY 702
LY HLF FFGHPEVY
Sbjct: 231 LYEHLFWFFGHPEVY 245
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 72.5 bits (170), Expect = 9e-12
Identities = 38/63 (60%), Positives = 41/63 (65%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 433 ISS 441
ISS
Sbjct: 156 ISS 158
Score = 56.8 bits (131), Expect = 5e-07
Identities = 28/58 (48%), Positives = 34/58 (58%)
Frame = +3
Query: 510 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIF 683
LPLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPI F
Sbjct: 182 LPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFF 239
Score = 40.7 bits (91), Expect = 0.034
Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 175
N KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 10 NAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFF 69
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAF 253
N L+PL++GA D AF
Sbjct: 70 LVMPALIGGFGNYLLPLMIGATDTAF 95
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 433 ISS 441
ISS
Sbjct: 155 ISS 157
Score = 68.1 bits (159), Expect = 2e-10
Identities = 33/58 (56%), Positives = 37/58 (63%)
Frame = +3
Query: 510 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIF 683
LPLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPI F
Sbjct: 181 LPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFF 238
Score = 54.0 bits (124), Expect = 3e-06
Identities = 33/86 (38%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 175
N KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 9 NAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFF 68
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAF 253
N LVP+++GAPD+AF
Sbjct: 69 MVMPAMVGGFGNYLVPVMIGAPDMAF 94
Score = 33.5 bits (73), Expect = 5.1
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1
Query: 658 LYPHLF*FFGHPEVY 702
LY HLF FFGHPEVY
Sbjct: 230 LYQHLFWFFGHPEVY 244
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 433 ISS 441
ISS
Sbjct: 155 ISS 157
Score = 67.7 bits (158), Expect = 3e-10
Identities = 32/49 (65%), Positives = 36/49 (73%)
Frame = +3
Query: 510 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPI 656
LPLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPI
Sbjct: 181 LPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPI 229
Score = 54.0 bits (124), Expect = 3e-06
Identities = 33/86 (38%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 175
N KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 9 NAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFF 68
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAF 253
N LVP+++GAPD+AF
Sbjct: 69 MVMPAMVGGFGNYLVPVMIGAPDMAF 94
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 433 ISS 441
ISS
Sbjct: 155 ISS 157
Score = 54.0 bits (124), Expect = 3e-06
Identities = 33/86 (38%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 175
N KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 9 NAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFF 68
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAF 253
N LVP+++GAPD+AF
Sbjct: 69 MVMPAMVGGFGNYLVPVMIGAPDMAF 94
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 71.3 bits (167), Expect = 2e-11
Identities = 38/63 (60%), Positives = 41/63 (65%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PRIN+I F +VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL
Sbjct: 96 PRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTS 155
Query: 433 ISS 441
ISS
Sbjct: 156 ISS 158
Score = 60.5 bits (140), Expect = 4e-08
Identities = 29/50 (58%), Positives = 34/50 (68%)
Frame = +3
Query: 510 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIF 659
+PLFV A+ ITAF + IT+LL DRN NTSFF+ AGGGDPIF
Sbjct: 182 MPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIF 231
Score = 38.3 bits (85), Expect = 0.18
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 175
N KDI +Y EL PGS L G+ Q++N +V HA
Sbjct: 10 NAKDISIMYFMLALFSGMAGSAMSMIIRMELAAPGSQYLHGNSQLFNVLVVGHAVLMIFF 69
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAF 253
N ++PL++GA D++F
Sbjct: 70 LAMPALIGGFGNYMLPLMIGATDMSF 95
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 70.5 bits (165), Expect = 4e-11
Identities = 36/59 (61%), Positives = 41/59 (69%)
Frame = +3
Query: 510 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIFW 686
+PLFV AV ITA AGAIT+LLTDRN+NTSFFDPAGGGDPI + +FW
Sbjct: 100 MPLFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPIL---YQHLFW 155
Score = 68.5 bits (160), Expect = 1e-10
Identities = 37/63 (58%), Positives = 41/63 (65%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR N+ F VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG
Sbjct: 14 PRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAG 73
Query: 433 ISS 441
+ S
Sbjct: 74 VXS 76
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 70.1 bits (164), Expect = 5e-11
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PRINNI F +VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+
Sbjct: 96 PRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTS 155
Query: 433 ISS 441
ISS
Sbjct: 156 ISS 158
Score = 57.2 bits (132), Expect = 4e-07
Identities = 29/61 (47%), Positives = 35/61 (57%)
Frame = +3
Query: 510 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIFWT 689
LPLFV A+ ITA + +T+LL DRN NTSFF+ AGGGDPI F T
Sbjct: 182 LPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFGT 241
Query: 690 S 692
+
Sbjct: 242 T 242
Score = 38.7 bits (86), Expect = 0.14
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 175
N KDI LY EL PG L G++Q++N +V HA
Sbjct: 10 NAKDIAVLYFLLALFSGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAILMIFF 69
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAF 253
N ++PL++GA D AF
Sbjct: 70 MVMPALIGGFGNYMLPLMIGATDTAF 95
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 69.3 bits (162), Expect = 8e-11
Identities = 34/63 (53%), Positives = 41/63 (65%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NNI F +VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G
Sbjct: 98 PRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSG 157
Query: 433 ISS 441
+SS
Sbjct: 158 VSS 160
Score = 69.3 bits (162), Expect = 8e-11
Identities = 34/58 (58%), Positives = 38/58 (65%)
Frame = +3
Query: 510 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIF 683
LPLFV +V +TAF AGAIT+LLTDRN NT+FFDPAGGGDPI F
Sbjct: 184 LPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFF 241
Score = 56.4 bits (130), Expect = 6e-07
Identities = 31/86 (36%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXX 175
NHKDIGTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 12 NHKDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFF 71
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAF 253
N VP+++GAPD+AF
Sbjct: 72 MVMPAMIGGFGNWFVPILIGAPDMAF 97
Score = 33.5 bits (73), Expect = 5.1
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1
Query: 658 LYPHLF*FFGHPEVY 702
LY HLF FFGHPEVY
Sbjct: 233 LYQHLFWFFGHPEVY 247
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 67.3 bits (157), Expect = 3e-10
Identities = 34/63 (53%), Positives = 40/63 (63%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NNI F +VE G GTG TVYPPLSS +H G +VDLAIFSLH++G
Sbjct: 103 PRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISG 162
Query: 433 ISS 441
SS
Sbjct: 163 ASS 165
Score = 64.9 bits (151), Expect = 2e-09
Identities = 31/58 (53%), Positives = 37/58 (63%)
Frame = +3
Query: 510 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIF 683
+PLFV ++ +TAF AGAIT+LLTDRN NTSFFD +GGGDPI F
Sbjct: 189 IPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFF 246
Score = 56.8 bits (131), Expect = 5e-07
Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 175
NHKDIGTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 17 NHKDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFF 76
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAF 253
N LVP+++G+PD+AF
Sbjct: 77 MVMPVMIGGFGNWLVPIMIGSPDMAF 102
Score = 33.5 bits (73), Expect = 5.1
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1
Query: 658 LYPHLF*FFGHPEVY 702
LY HLF FFGHPEVY
Sbjct: 238 LYQHLFWFFGHPEVY 252
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 66.5 bits (155), Expect = 6e-10
Identities = 39/84 (46%), Positives = 44/84 (52%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
NHKD GTL AELG PG+L+GDDQ N IVTAHA
Sbjct: 12 NHKDXGTLXXIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXMX 71
Query: 182 XXXXXXXXXN*LVPLILGAPDIAF 253
N LVPL++GAPD+AF
Sbjct: 72 MPIMIGGFGNWLVPLMIGAPDMAF 95
Score = 36.7 bits (81), Expect = 0.55
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 369
PR+NN+ F VE GAGTG TVYPPL+
Sbjct: 96 PRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 66.5 bits (155), Expect = 6e-10
Identities = 33/63 (52%), Positives = 39/63 (61%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NNI + +ENG GTG T+YPPLS +H G SVDLAIF LHL+G
Sbjct: 96 PRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSG 155
Query: 433 ISS 441
ISS
Sbjct: 156 ISS 158
Score = 56.0 bits (129), Expect = 8e-07
Identities = 30/58 (51%), Positives = 33/58 (56%)
Frame = +3
Query: 510 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIF 683
L LF AV ITA AG IT++LTDRN NTSFF+ AGGGDPI F
Sbjct: 182 LILFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFF 239
Score = 49.6 bits (113), Expect = 7e-05
Identities = 30/85 (35%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXX 178
N KDIG LY EL PG I D+Q+YN+I+TAHA
Sbjct: 11 NAKDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFM 70
Query: 179 XXXXXXXXXXN*LVPLILGAPDIAF 253
N L+PL LG PD+ F
Sbjct: 71 VMPALIGGFGNFLLPLGLGGPDMGF 95
Score = 33.5 bits (73), Expect = 5.1
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1
Query: 658 LYPHLF*FFGHPEVY 702
LY HLF FFGHPEVY
Sbjct: 231 LYQHLFWFFGHPEVY 245
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 64.5 bits (150), Expect = 2e-09
Identities = 33/59 (55%), Positives = 39/59 (66%)
Frame = +3
Query: 510 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIFW 686
+PLF +V +TA+ AGAIT+LLTDRN T+FFDPAGGGDPI F IFW
Sbjct: 287 VPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPIL---FQHIFW 342
Score = 52.8 bits (121), Expect = 8e-06
Identities = 23/63 (36%), Positives = 36/63 (57%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G
Sbjct: 201 PRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSG 260
Query: 433 ISS 441
SS
Sbjct: 261 ASS 263
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 64.1 bits (149), Expect = 3e-09
Identities = 30/63 (47%), Positives = 37/63 (58%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NN+ + I+ENG GTG T+YPPLS +H VDL IF LHL+G
Sbjct: 122 PRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSG 181
Query: 433 ISS 441
ISS
Sbjct: 182 ISS 184
Score = 52.8 bits (121), Expect = 8e-06
Identities = 30/58 (51%), Positives = 33/58 (56%)
Frame = +3
Query: 510 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIF 683
L LF AV ITA A AIT+LLTDRNLNTSF++ AGGGD I F
Sbjct: 208 LALFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFF 265
Score = 45.6 bits (103), Expect = 0.001
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXX 178
N KDI LY EL PG I D+Q+YN+I+T+H
Sbjct: 37 NAKDIAILYLIFALFSGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIFFM 96
Query: 179 XXXXXXXXXXN*LVPLILGAPDIAF 253
N L+P+++G PD+AF
Sbjct: 97 VMPALIGGFGNFLLPILIGGPDMAF 121
Score = 33.5 bits (73), Expect = 5.1
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1
Query: 658 LYPHLF*FFGHPEVY 702
LY HLF FFGHPEVY
Sbjct: 257 LYQHLFWFFGHPEVY 271
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 433 ISS 441
+SS
Sbjct: 173 LSS 175
Score = 52.4 bits (120), Expect = 1e-05
Identities = 29/59 (49%), Positives = 35/59 (59%)
Frame = +3
Query: 510 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIFW 686
LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+ + IFW
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLL---YEHIFW 254
Score = 32.7 bits (71), Expect = 9.0
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1
Query: 658 LYPHLF*FFGHPEVY 702
LY H+F FFGHPEVY
Sbjct: 248 LYEHIFWFFGHPEVY 262
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 433 ISS 441
+SS
Sbjct: 173 LSS 175
Score = 52.4 bits (120), Expect = 1e-05
Identities = 29/59 (49%), Positives = 35/59 (59%)
Frame = +3
Query: 510 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIFW 686
LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+ + IFW
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLL---YEHIFW 254
Score = 32.7 bits (71), Expect = 9.0
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1
Query: 658 LYPHLF*FFGHPEVY 702
LY H+F FFGHPEVY
Sbjct: 248 LYEHIFWFFGHPEVY 262
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 433 ISS 441
+SS
Sbjct: 173 LSS 175
Score = 52.4 bits (120), Expect = 1e-05
Identities = 29/59 (49%), Positives = 35/59 (59%)
Frame = +3
Query: 510 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIFW 686
LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+ + IFW
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLL---YEHIFW 254
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 63.7 bits (148), Expect = 4e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 433 ISS 441
+SS
Sbjct: 173 LSS 175
Score = 51.2 bits (117), Expect = 2e-05
Identities = 26/49 (53%), Positives = 31/49 (63%)
Frame = +3
Query: 510 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPI 656
LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPL 247
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 63.3 bits (147), Expect = 6e-09
Identities = 32/63 (50%), Positives = 36/63 (57%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NN+ F + G GTG TVYPPLS + H G SVDL IFSLHLAG
Sbjct: 79 PRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAG 138
Query: 433 ISS 441
SS
Sbjct: 139 ASS 141
Score = 62.1 bits (144), Expect = 1e-08
Identities = 31/58 (53%), Positives = 36/58 (62%)
Frame = +3
Query: 510 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIF 683
+ LF +V ITA AGAIT+LLTDRN+NTSFFDP+GGGDPI F
Sbjct: 165 MSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFF 222
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = +2
Query: 89 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 253
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++F
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSF 78
Score = 33.5 bits (73), Expect = 5.1
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1
Query: 658 LYPHLF*FFGHPEVY 702
LY HLF FFGHPEVY
Sbjct: 214 LYQHLFWFFGHPEVY 228
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 62.9 bits (146), Expect = 7e-09
Identities = 31/55 (56%), Positives = 35/55 (63%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 417
PR+NN+ F +VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 11 PRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 40.7 bits (91), Expect = 0.034
Identities = 20/44 (45%), Positives = 22/44 (50%)
Frame = +2
Query: 521 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRP 652
CM C +Y TCFS S+Y IIN K KY IF W P
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSP 140
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 61.7 bits (143), Expect = 2e-08
Identities = 32/63 (50%), Positives = 34/63 (53%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NN F E G GTG TVYPPLSS +H G SVDL IFS HL G
Sbjct: 99 PRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVG 158
Query: 433 ISS 441
I S
Sbjct: 159 IGS 161
Score = 59.3 bits (137), Expect = 9e-08
Identities = 28/58 (48%), Positives = 34/58 (58%)
Frame = +3
Query: 510 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIF 683
LPLFV +V +T+F A AIT+LL DRN NTSF+DP GGGD + F
Sbjct: 185 LPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFF 242
Score = 41.9 bits (94), Expect = 0.015
Identities = 26/86 (30%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 175
NHK IG LY EL PG L G+ YN I T H
Sbjct: 13 NHKRIGILYLFFGVFNGFLAVLLSMLMRLELAFPGDQILFGEYHFYNMITTVHGVLMLFV 72
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAF 253
N VP+++GAPD++F
Sbjct: 73 VVMPILFGGFGNYFVPILIGAPDMSF 98
Score = 33.5 bits (73), Expect = 5.1
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1
Query: 658 LYPHLF*FFGHPEVY 702
LY HLF FFGHPEVY
Sbjct: 234 LYQHLFWFFGHPEVY 248
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/67 (49%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSL 420
PR+NNI F I+E G GTG T+ YPPLS +H G SVDLAIF+L
Sbjct: 124 PRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFAL 183
Query: 421 HLAGISS 441
HL+G+SS
Sbjct: 184 HLSGVSS 190
Score = 52.8 bits (121), Expect = 8e-06
Identities = 30/85 (35%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXX 178
N KDIGTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 39 NAKDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFM 98
Query: 179 XXXXXXXXXXN*LVPLILGAPDIAF 253
N L+PL++G PD+AF
Sbjct: 99 VMPALIGGFGNFLMPLMIGGPDMAF 123
Score = 47.2 bits (107), Expect = 4e-04
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +3
Query: 585 ITILLTDRNLNTSFFDPAGGGDPIFISTFILIFW 686
IT++LTDRN NTSFF+ AGGGDPI F +FW
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPIL---FQHLFW 262
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 60.5 bits (140), Expect = 4e-08
Identities = 32/62 (51%), Positives = 38/62 (61%)
Frame = +1
Query: 256 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 435
R+NNI F +VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G
Sbjct: 102 RLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGF 161
Query: 436 SS 441
SS
Sbjct: 162 SS 163
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = +3
Query: 507 SLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIFW 686
++PLF AV TA A +T+ + DRN NTSFF+ AGGGD + L +W
Sbjct: 186 NVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQH--LFYW 243
Score = 44.4 bits (100), Expect = 0.003
Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 175
N KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 15 NAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFF 74
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAF 253
N L+PL+LGA D+AF
Sbjct: 75 FVMPALVGGFGNYLMPLMLGASDMAF 100
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 59.7 bits (138), Expect = 7e-08
Identities = 53/181 (29%), Positives = 70/181 (38%), Gaps = 1/181 (0%)
Frame = +2
Query: 89 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFHE*II 268
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AF
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 269 *DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISHIEEDP*ILLFFHYI*QVFHXXX 448
F +P +Y + K +DE TP + + + +F ++ V
Sbjct: 84 MSFGFFPLHWHY-YSFFTVKGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSSILG 142
Query: 449 XXXXXXXXXXXXXXXXXXXXXXXXCMSCRDYSXXXXXXTTCFSWSYYNIINRS-KLKYII 625
C+ Y TC S SYY IIN L YII
Sbjct: 143 SYWLYYNNSLYTVSSSSNGTTTFICLISVYYRYPSTPFFTCTSSSYYYIINSPLLLHYII 202
Query: 626 F 628
+
Sbjct: 203 W 203
Score = 33.1 bits (72), Expect = 6.8
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 388 GRSVDLAIFSLHLAGISS 441
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 9e-08
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +1
Query: 319 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 441
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 57.2 bits (132), Expect = 4e-07
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = +3
Query: 510 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDP 653
+PLFV +V +TAF A AIT+LLTDRN T+F+D AGGGDP
Sbjct: 224 MPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDP 271
Score = 50.0 bits (114), Expect = 6e-05
Identities = 31/67 (46%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVE----NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSL 420
PR+NNI F V NGAGTG TVY PLS++ G +VD+AI SL
Sbjct: 135 PRMNNISFWLLIPAFALLLGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAILSL 193
Query: 421 HLAGISS 441
H+AG SS
Sbjct: 194 HIAGASS 200
Score = 33.5 bits (73), Expect = 5.1
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1
Query: 658 LYPHLF*FFGHPEVY 702
LY HLF FFGHPEVY
Sbjct: 273 LYQHLFWFFGHPEVY 287
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 55.6 bits (128), Expect = 1e-06
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXX 175
NHKDIGTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 13 NHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFF 72
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAF 253
N VP+++G+PD+AF
Sbjct: 73 MVMPAMIGGFGNWFVPILIGSPDMAF 98
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 54.0 bits (124), Expect = 3e-06
Identities = 33/86 (38%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 175
N KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 9 NAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFF 68
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAF 253
N LVP+++GAPD+AF
Sbjct: 69 MVMPAMVGGFGNYLVPVMIGAPDMAF 94
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 52.8 bits (121), Expect = 8e-06
Identities = 29/63 (46%), Positives = 34/63 (53%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+ N+ F + G G VYPP SS +AH +VDL IF LHLAG
Sbjct: 85 PRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAG 144
Query: 433 ISS 441
ISS
Sbjct: 145 ISS 147
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 51.6 bits (118), Expect = 2e-05
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NN+ + G G G T+YPPLS++ G +DLA+FSLH+AG
Sbjct: 97 PRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAG 156
Query: 433 ISS 441
+SS
Sbjct: 157 MSS 159
Score = 39.9 bits (89), Expect = 0.059
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +3
Query: 576 AGAITILLTDRNLNTSFFDPAGGGDPI 656
A +T+LL DR+ +TSF+ P GGGDPI
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGDPI 232
Score = 37.5 bits (83), Expect = 0.32
Identities = 21/83 (25%), Positives = 33/83 (39%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
NHKDIGT+Y EL +PG + +Y++I+T HA
Sbjct: 13 NHKDIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFV 72
Query: 182 XXXXXXXXXN*LVPLILGAPDIA 250
N +PL++ D++
Sbjct: 73 MPTSIGGLGNWFIPLMIKIKDLS 95
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 50.4 bits (115), Expect = 4e-05
Identities = 28/60 (46%), Positives = 33/60 (55%)
Frame = +3
Query: 507 SLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIFW 686
S LF+ A ITA AG +T++L DRN NTSF+D GGGD I F IFW
Sbjct: 183 SWSLFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLIL---FQHIFW 239
Score = 44.0 bits (99), Expect = 0.004
Identities = 22/63 (34%), Positives = 30/63 (47%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+NN+ F + E G G G T+YP L H + D +F++HL G
Sbjct: 98 PRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLG 157
Query: 433 ISS 441
ISS
Sbjct: 158 ISS 160
Score = 33.9 bits (74), Expect = 3.9
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +2
Query: 104 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 253
G L GD Q YN ++T+H N +P++ G PD+ F
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVF 97
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +1
Query: 361 PLSSNIAHRGRSVDLAIFSLHLAGISS 441
PL+S+IAH G SVD+AIFSLHLAG+SS
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSS 98
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +2
Query: 524 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF 628
M C +YS +TC WSYYN IN SKLKYI+F
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILF 118
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 46.4 bits (105), Expect = 7e-04
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 175
NHK IGT Y EL +PG G Q+YN+++T H
Sbjct: 20 NHKTIGTYYIVLGYWAGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFF 79
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAF 253
N ++PL+LGAP++AF
Sbjct: 80 LVMPILIGGFGNWMLPLMLGAPEMAF 105
Score = 41.9 bits (94), Expect = 0.015
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +3
Query: 510 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIF 683
+ +FV +T+F AG++ LL DRN NTSF+D GG+P+ F
Sbjct: 191 ISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFF 248
Score = 33.5 bits (73), Expect = 5.1
Identities = 20/63 (31%), Positives = 25/63 (39%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+N + F + G G+ T YPPLS S+D I LH G
Sbjct: 106 PRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHTVG 164
Query: 433 ISS 441
I S
Sbjct: 165 IGS 167
Score = 33.5 bits (73), Expect = 5.1
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1
Query: 658 LYPHLF*FFGHPEVY 702
LY HLF FFGHPEVY
Sbjct: 240 LYQHLFWFFGHPEVY 254
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 46.0 bits (104), Expect = 9e-04
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = +3
Query: 576 AGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIFW 686
A IT+LL DRN T+FF+P+GGGDPI F +FW
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPIL---FQHLFW 326
Score = 39.1 bits (87), Expect = 0.10
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +1
Query: 331 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 441
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 44.4 bits (100), Expect = 0.003
Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 175
N KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 15 NAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFF 74
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAF 253
N L+PL+LGA D+AF
Sbjct: 75 FVMPALVGGFGNYLMPLMLGASDMAF 100
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 42.7 bits (96), Expect = 0.008
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3
Query: 576 AGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIFW 686
AGA+T+L D+ L T+FF+PA GGDP+ IFW
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPLIYQN---IFW 192
Score = 33.1 bits (72), Expect = 6.8
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 101 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAF 253
PG + D + YN ++T H N L+PL++GA D+AF
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAF 52
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 41.9 bits (94), Expect = 0.015
Identities = 24/84 (28%), Positives = 36/84 (42%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
+HKDIG LY EL +PG + + YN+++T+H
Sbjct: 93 DHKDIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHG-ITMLFLF 151
Query: 182 XXXXXXXXXN*LVPLILGAPDIAF 253
N L+PL++GA D+AF
Sbjct: 152 ATPIIAAFSNYLIPLLIGADDMAF 175
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 41.1 bits (92), Expect = 0.026
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 432
PR+N +E G+GTG T+YPPLS+++++ G +D IF L AG
Sbjct: 103 PRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAG 160
Query: 433 ISS 441
I+S
Sbjct: 161 IAS 163
Score = 33.5 bits (73), Expect = 5.1
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1
Query: 658 LYPHLF*FFGHPEVY 702
LY HLF FFGHPEVY
Sbjct: 236 LYQHLFWFFGHPEVY 250
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 41.1 bits (92), Expect = 0.026
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLA 429
PRIN+I E G GTG T+YPPLS+++ +VD+ IF L ++
Sbjct: 100 PRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVS 159
Query: 430 GISS 441
G++S
Sbjct: 160 GVAS 163
Score = 35.5 bits (78), Expect = 1.3
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 579 GAITILLTDRNLNTSFFDPAGGGDPIFISTFILIF 683
G + +LL+D + NT FFDP GDPI F
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFF 244
Score = 33.5 bits (73), Expect = 5.1
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1
Query: 658 LYPHLF*FFGHPEVY 702
LY HLF FFGHPEVY
Sbjct: 236 LYQHLFWFFGHPEVY 250
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 39.5 bits (88), Expect = 0.078
Identities = 22/60 (36%), Positives = 31/60 (51%)
Frame = +3
Query: 507 SLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIFW 686
S+PLF A+ T+ A A+ +L D TSFF+P GGGDP+ + +FW
Sbjct: 191 SMPLFCWAMLATSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPV---VYQHLFW 247
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 38.7 bits (86), Expect = 0.14
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 507 SLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIF 683
SL LF ++ + + A IT++LTD++L T F+D GGDP+ F
Sbjct: 164 SLSLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFF 222
Score = 36.7 bits (81), Expect = 0.55
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +1
Query: 334 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 441
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
Score = 33.5 bits (73), Expect = 5.1
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1
Query: 658 LYPHLF*FFGHPEVY 702
LY HLF FFGHPEVY
Sbjct: 214 LYQHLFWFFGHPEVY 228
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 37.9 bits (84), Expect = 0.24
Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 175
N KDI LY EL PG+ L G+ Q++N +V HA
Sbjct: 10 NAKDIAILYFIFAIFCGMAGTAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHAVLMIFF 69
Query: 176 XXXXXXXXXXXN*LVPLILGAPDIAF 253
N L+PL++GA D++F
Sbjct: 70 LVMPALIGGFGNYLLPLMIGASDMSF 95
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 37.5 bits (83), Expect = 0.32
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +3
Query: 510 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIFW 686
+P+FV G +LL D + TSFF P GGGDP+ F FW
Sbjct: 207 MPVFVWTAWAAQTIQLIGLPALTGGAVMLLFDLSFGTSFFRPEGGGDPVLFQHF---FW 262
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 36.7 bits (81), Expect = 0.55
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +3
Query: 510 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGD 650
+PLFV ++ +T+F A T L+ DR + T FF+PA GGD
Sbjct: 197 IPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGD 243
Score = 33.5 bits (73), Expect = 5.1
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = +1
Query: 622 HFLILLEEETQFLYPHLF*FFGHPEVY 702
HF E L+ HLF FFGHPEVY
Sbjct: 234 HFFNPAEGGDVLLWQHLFWFFGHPEVY 260
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 36.7 bits (81), Expect = 0.55
Identities = 23/84 (27%), Positives = 30/84 (35%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
+HK IG ++ EL PG I D YN T H
Sbjct: 41 DHKRIGLMFLFWVLLFFLVGGIFALLIRVELLTPGPTIMDAMTYNRTFTLHGLVMIFLFM 100
Query: 182 XXXXXXXXXN*LVPLILGAPDIAF 253
N ++PL+LGA D+AF
Sbjct: 101 IPAIPAVFGNFMLPLMLGAKDVAF 124
Score = 33.5 bits (73), Expect = 5.1
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 510 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL-NTSFFDPAGGGDPIFISTFILIFW 686
+PLFV A+ T+ G + +L+T NL FDPA GGDP+ F +FW
Sbjct: 207 MPLFVWAIYATS-CIQVLATPVIGLLLVLVTVENLFGFGMFDPARGGDPVL---FQHLFW 262
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 36.7 bits (81), Expect = 0.55
Identities = 22/84 (26%), Positives = 31/84 (36%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
+HK IG ++ EL PG I D YN + T H
Sbjct: 34 DHKRIGVMFLVATTISFALGGFFALLIRLELLTPGPTIMDAMTYNRMFTLHGVVMIFLFM 93
Query: 182 XXXXXXXXXN*LVPLILGAPDIAF 253
N L+P+++GA D+AF
Sbjct: 94 IPAIPSGFGNFLLPIMIGAKDVAF 117
Score = 32.7 bits (71), Expect = 9.0
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +3
Query: 510 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIFW 686
LPLFV ++ T+ ++ ++ + FDPA GGDP+ F FW
Sbjct: 200 LPLFVWSIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHF---FW 255
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 36.7 bits (81), Expect = 0.55
Identities = 22/55 (40%), Positives = 26/55 (47%)
Frame = +3
Query: 258 NK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 422
NK +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 81 NKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 36.3 bits (80), Expect = 0.73
Identities = 21/56 (37%), Positives = 27/56 (48%)
Frame = +3
Query: 516 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIF 683
LF ++ IT AG IT+LL+DRN N FF GG PI + +F
Sbjct: 16 LFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLF 71
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 35.5 bits (78), Expect = 1.3
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +3
Query: 576 AGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIFW 686
A A+ +LLTDR + FF+PA GGDPI + +FW
Sbjct: 205 AAALLMLLTDRLGVSGFFNPAVGGDPI---AYAHLFW 238
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 35.1 bits (77), Expect = 1.7
Identities = 23/85 (27%), Positives = 31/85 (36%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDD-QIYNTIVTAHAXXXXXXX 178
+HK +G LY EL G I DD +YNT + H
Sbjct: 13 DHKRVGILYLIGSIAAFAVAGIMAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAMILAF 72
Query: 179 XXXXXXXXXXN*LVPLILGAPDIAF 253
N +PL++GA D+AF
Sbjct: 73 QIPALTGFFANYFIPLMIGAKDVAF 97
Score = 33.1 bits (72), Expect = 6.8
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 582 AITILLTDRNLNTSFFDPAGGGDPIFISTFILIFW 686
A+T+L D+ + T FFD A GGD + T+ +FW
Sbjct: 205 AVTMLTFDKYIGTHFFDAAAGGDAL---TYQNLFW 236
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 35.1 bits (77), Expect = 1.7
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +3
Query: 510 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIF 683
+PLFV + + A A+ +LL DR L ++FFDP GG + + IF
Sbjct: 200 VPLFVWMMLMQAILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIF 257
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 35.1 bits (77), Expect = 1.7
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +1
Query: 253 PRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAHR-GRSVDLAIFSLHL 426
PR+N I F ++ +G T+YPPLS+ A G ++DL++ +H+
Sbjct: 105 PRMNGISFWMLIVGVVIFVISNVLMSKPISSGWTLYPPLSTRDADNIGVNIDLSLLVVHV 164
Query: 427 AGISS 441
GISS
Sbjct: 165 LGISS 169
Score = 33.5 bits (73), Expect = 5.1
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1
Query: 658 LYPHLF*FFGHPEVY 702
LY HLF FFGHPEVY
Sbjct: 240 LYQHLFWFFGHPEVY 254
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 35.1 bits (77), Expect = 1.7
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +3
Query: 510 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPIFISTFILIFW 686
+P++V +V + A ++L +R + S+F+PA GGDP+ F FW
Sbjct: 191 MPIYVWSVFAASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQQF---FW 246
>UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=21; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Sepia officinalis (Common cuttlefish)
Length = 375
Score = 34.3 bits (75), Expect = 2.9
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 1 KS*RYWNIIFYFWYLIRNNWNIFKTFNS 84
KS YWNI+F+FWYLI ++ K NS
Sbjct: 344 KSQSYWNIMFHFWYLISFISHLAKINNS 371
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 33.5 bits (73), Expect = 5.1
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +3
Query: 582 AITILLTDRNLNTSFFDPAGGGDPIF 659
A+ +LL DRN T+FF A GGDPIF
Sbjct: 260 ALIMLLLDRNFGTTFFTVA-GGDPIF 284
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 32.7 bits (71), Expect = 9.0
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 334 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 441
AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSS 190
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 32.7 bits (71), Expect = 9.0
Identities = 25/84 (29%), Positives = 31/84 (36%)
Frame = +2
Query: 2 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 181
NHKDIG LY EL + G+ + YN V+ H
Sbjct: 21 NHKDIGVLYLITALFFLVFGGVLALLFRLELISSGADLLGSMGYNQAVSTHGLLMVFWFI 80
Query: 182 XXXXXXXXXN*LVPLILGAPDIAF 253
N LVPL +GA D+AF
Sbjct: 81 SPFAFGFA-NYLVPLQIGADDLAF 103
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 538,800,327
Number of Sequences: 1657284
Number of extensions: 8898731
Number of successful extensions: 20842
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 19538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20744
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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