Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20688
         (711 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory pro...    24   1.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   1.9  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   3.2  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   3.2  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   3.2  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    22   5.7  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   7.5  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   7.5  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   7.5  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   9.9  

>DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory
           protein 8 protein.
          Length = 99

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 423 GAELVDAVLDVVRKECENCDCLQ 491
           G ++  A+ +++ K CE CD  Q
Sbjct: 49  GNQIKGALPEIIGKNCERCDSRQ 71


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +3

Query: 369 VFGQSGAGNNW-AKGHYTEGAELVDAVLDVVRKECENCDCLQG 494
           +  + G  N + A+  Y  G+E   +++ +   +C  C C  G
Sbjct: 839 ILAEGGCPNLYDARKPYVNGSEYHPSIVSLGEYKCVTCKCENG 881


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 535 HGQPPHLKDPRRVPDRIMNTYSVVPSP 615
           H QPP  + P +      NT + +PSP
Sbjct: 205 HQQPPIQQQPNQGQQPPGNTAAALPSP 231


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 535 HGQPPHLKDPRRVPDRIMNTYSVVPSP 615
           H QPP  + P +      NT + +PSP
Sbjct: 207 HQQPPIQQQPNQGQQPPGNTAAALPSP 233


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +3

Query: 501 LTHPSAAAPVPAWATSSSQRSAKSTRQNHEHI 596
           +T P AAAP PA  +S S  S  S      HI
Sbjct: 27  MTSP-AAAPPPATTSSGSPASVASNASAPLHI 57


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = +3

Query: 405 KGHYT-EGAELVDAVLDVVRKECENC 479
           KG  T +GAEL   + D +  EC  C
Sbjct: 53  KGKCTPDGAELKRHLPDALHTECSKC 78


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 600 SSPLAQSIRHCRRTIQRSSLHPS 668
           SSP  + I    R+ + +SLHPS
Sbjct: 154 SSPFDKLIEEDSRSNEDTSLHPS 176


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 600 SSPLAQSIRHCRRTIQRSSLHPS 668
           SSP  + I    R+ + +SLHPS
Sbjct: 102 SSPFDKLIEEDSRSNEDTSLHPS 124


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 600 SSPLAQSIRHCRRTIQRSSLHPS 668
           SSP  + I    R+ + +SLHPS
Sbjct: 285 SSPFDKLIEEDSRSNEDTSLHPS 307


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 15/46 (32%), Positives = 18/46 (39%)
 Frame = +3

Query: 438 DAVLDVVRKECENCDCLQGFQLTHPSAAAPVPAWATSSSQRSAKST 575
           D V    RK  E C  LQGF          +  +A+ S    AK T
Sbjct: 233 DVVASNSRKTAEMCYKLQGFYPEEAPQRKELLRFASESRGSVAKFT 278


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,491
Number of Sequences: 336
Number of extensions: 2572
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)