Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20688
(711 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 169 1e-42
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 168 4e-42
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 166 1e-41
03_01_0034 + 318432-318825,318902-319851 163 9e-41
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 163 1e-40
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 163 1e-40
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 155 2e-38
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 150 9e-37
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 99 2e-21
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 98 7e-21
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 97 9e-21
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 93 3e-19
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 76 2e-14
09_04_0325 + 16689613-16689772,16690043-16690329 32 0.52
08_02_1147 - 24688686-24689729,24689875-24690036,24690339-246903... 30 2.1
12_01_0777 - 7095081-7096259,7096636-7096725,7096827-7096902,709... 28 6.4
07_01_1194 - 11325882-11326337,11327152-11327262 28 6.4
03_05_0692 + 26800698-26800704,26802174-26802304,26802747-268028... 28 6.4
12_02_0931 + 24512496-24512567,24512705-24512806,24512939-245129... 28 8.4
06_01_0487 - 3459853-3459917,3460058-3460408,3460991-3461114,346... 28 8.4
03_06_0601 + 34991912-34992352,34993719-34994516 28 8.4
03_02_0319 - 7421357-7421757,7421768-7421843,7424695-7424796,742... 28 8.4
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 169 bits (412), Expect = 1e-42
Identities = 72/83 (86%), Positives = 80/83 (96%)
Frame = +3
Query: 261 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 440
SGG+YVPRA+L+DLEPGTMD+VRSG YGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 55 SGGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 441 AVLDVVRKECENCDCLQGFQLTH 509
+VLDVVRKE ENCDCLQGFQ+ H
Sbjct: 115 SVLDVVRKEAENCDCLQGFQVCH 137
Score = 101 bits (243), Expect = 4e-22
Identities = 44/55 (80%), Positives = 49/55 (89%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEAS 246
MREI+H+Q GQCGNQIGAKFWE+I +EHGID TG Y G SDLQLERI+VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEAS 55
Score = 78.6 bits (185), Expect = 5e-15
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = +1
Query: 574 PDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 711
PDR+M T+SV PSPKVSDTVVEPYNA LS+HQLVEN DE +DNE
Sbjct: 160 PDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNE 205
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 168 bits (408), Expect = 4e-42
Identities = 71/83 (85%), Positives = 80/83 (96%)
Frame = +3
Query: 261 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 440
SGG+YVPRA+L+DLEPGTMD+VRSG +GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 55 SGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 441 AVLDVVRKECENCDCLQGFQLTH 509
+VLDVVRKE ENCDCLQGFQ+ H
Sbjct: 115 SVLDVVRKEAENCDCLQGFQVCH 137
Score = 101 bits (242), Expect = 6e-22
Identities = 43/55 (78%), Positives = 49/55 (89%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEAS 246
MREI+H+Q GQCGNQIGAKFWE+I +EHG+D TG Y G SDLQLERI+VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEAS 55
Score = 78.6 bits (185), Expect = 5e-15
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = +1
Query: 574 PDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 711
PDR+M T+SV PSPKVSDTVVEPYNA LS+HQLVEN DE +DNE
Sbjct: 160 PDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNE 205
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 166 bits (404), Expect = 1e-41
Identities = 70/83 (84%), Positives = 80/83 (96%)
Frame = +3
Query: 261 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 440
SGG++VPRA+L+DLEPGTMD+VRSG +GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 55 SGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 441 AVLDVVRKECENCDCLQGFQLTH 509
+VLDVVRKE ENCDCLQGFQ+ H
Sbjct: 115 SVLDVVRKEAENCDCLQGFQVCH 137
Score = 101 bits (243), Expect = 4e-22
Identities = 44/55 (80%), Positives = 49/55 (89%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEAS 246
MREI+H+Q GQCGNQIGAKFWE+I +EHGID TG Y G SDLQLERI+VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEAS 55
Score = 78.6 bits (185), Expect = 5e-15
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = +1
Query: 574 PDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 711
PDR+M T+SV PSPKVSDTVVEPYNA LS+HQLVEN DE +DNE
Sbjct: 160 PDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNE 205
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 163 bits (397), Expect = 9e-41
Identities = 70/83 (84%), Positives = 78/83 (93%)
Frame = +3
Query: 261 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 440
S G++VPRA+L+DLEPGTMD+VRSG YG +FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 55 SCGRFVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 441 AVLDVVRKECENCDCLQGFQLTH 509
AVLDVVRKE ENCDCLQGFQ+ H
Sbjct: 115 AVLDVVRKEAENCDCLQGFQVCH 137
Score = 99.5 bits (237), Expect = 2e-21
Identities = 42/55 (76%), Positives = 48/55 (87%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEAS 246
MREI+H+Q GQCGNQIGAKFWE++ EHGID TG Y G SDLQLER++VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLERVNVYYNEAS 55
Score = 78.6 bits (185), Expect = 5e-15
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = +1
Query: 574 PDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 711
PDR+M T+SV PSPKVSDTVVEPYNA LS+HQLVEN DE +DNE
Sbjct: 160 PDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNE 205
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 163 bits (396), Expect = 1e-40
Identities = 69/83 (83%), Positives = 79/83 (95%)
Frame = +3
Query: 261 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 440
S G++VPRA+L+DLEPGTMD+VR+G YGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 235 SCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 294
Query: 441 AVLDVVRKECENCDCLQGFQLTH 509
+VLDVVRKE ENCDCLQGFQ+ H
Sbjct: 295 SVLDVVRKEAENCDCLQGFQVCH 317
Score = 105 bits (252), Expect = 3e-23
Identities = 43/55 (78%), Positives = 51/55 (92%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEAS 246
MREI+H+Q GQCGNQIG+KFWE++ +EHGIDPTG Y GTSDLQLER++VYYNEAS
Sbjct: 181 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEAS 235
Score = 78.6 bits (185), Expect = 5e-15
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = +1
Query: 574 PDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 711
PDR+M T+SV PSPKVSDTVVEPYNA LS+HQLVEN DE +DNE
Sbjct: 340 PDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNE 385
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 163 bits (396), Expect = 1e-40
Identities = 69/83 (83%), Positives = 79/83 (95%)
Frame = +3
Query: 261 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 440
S G++VPRA+L+DLEPGTMD+VR+G YGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 55 SCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 441 AVLDVVRKECENCDCLQGFQLTH 509
+VLDVVRKE ENCDCLQGFQ+ H
Sbjct: 115 SVLDVVRKEAENCDCLQGFQVCH 137
Score = 104 bits (250), Expect = 6e-23
Identities = 43/55 (78%), Positives = 51/55 (92%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEAS 246
MREI+H+Q GQCGNQIG+KFWE++ +EHGIDPTG Y GTSDLQLER++VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEAS 55
Score = 78.6 bits (185), Expect = 5e-15
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = +1
Query: 574 PDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 711
PDR+M T+SV PSPKVSDTVVEPYNA LS+HQLVEN DE +DNE
Sbjct: 160 PDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNE 205
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 155 bits (377), Expect = 2e-38
Identities = 66/78 (84%), Positives = 75/78 (96%)
Frame = +3
Query: 261 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 440
S G++VPRA+L+DLEPGTMD+VR+G YGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 55 SCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 441 AVLDVVRKECENCDCLQG 494
+VLDVVRKE ENCDCLQG
Sbjct: 115 SVLDVVRKEAENCDCLQG 132
Score = 104 bits (250), Expect = 6e-23
Identities = 43/55 (78%), Positives = 50/55 (90%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEAS 246
MREI+H+Q GQCGNQIGAKFWE++ +EHGIDPTG Y G SDLQLER++VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEAS 55
Score = 78.6 bits (185), Expect = 5e-15
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = +1
Query: 574 PDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 711
PDR+M T+SV PSPKVSDTVVEPYNA LS+HQLVEN DE +DNE
Sbjct: 181 PDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNE 226
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 150 bits (364), Expect = 9e-37
Identities = 64/77 (83%), Positives = 73/77 (94%)
Frame = +3
Query: 261 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 440
SGG++VPRA+L+DLEPGTMD++RSG G +FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 55 SGGRHVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 441 AVLDVVRKECENCDCLQ 491
+VLDVVRKE ENCDCLQ
Sbjct: 115 SVLDVVRKEAENCDCLQ 131
Score = 99 bits (238), Expect = 2e-21
Identities = 42/55 (76%), Positives = 48/55 (87%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEAS 246
MREI+H+Q GQCGNQIGAKFWE+I EHG+DPTG Y GTS QLERI+VY+NEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERINVYFNEAS 55
Score = 78.6 bits (185), Expect = 5e-15
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = +1
Query: 574 PDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 711
PDR+M T+SV PSPKVSDTVVEPYNA LS+HQLVEN DE +DNE
Sbjct: 176 PDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNE 221
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 99 bits (238), Expect = 2e-21
Identities = 46/82 (56%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Frame = +3
Query: 255 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 431
+E+G GK+VPRAI +DLEP +D VR+G+Y QLF P+ + G+ A NN+A+GHYT G E
Sbjct: 54 SETGAGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKE 113
Query: 432 LVDAVLDVVRKECENCDCLQGF 497
+VD LD VRK +NC LQGF
Sbjct: 114 IVDLCLDRVRKLADNCTGLQGF 135
Score = 53.2 bits (122), Expect = 2e-07
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +1
Query: 595 YSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 711
+++ PSP+VS VVEPYN+VLS H L+E+TD +DNE
Sbjct: 169 FTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNE 207
Score = 42.3 bits (95), Expect = 4e-04
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 183
MREI+ + GQ G Q+G WE+ EHGI+P G
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDG 34
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 97.9 bits (233), Expect = 7e-21
Identities = 44/82 (53%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Frame = +3
Query: 255 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 431
+E+G GK+VPRA+ +DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E
Sbjct: 54 SETGAGKHVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKE 113
Query: 432 LVDAVLDVVRKECENCDCLQGF 497
+VD LD +RK +NC LQGF
Sbjct: 114 IVDLCLDRIRKLADNCTGLQGF 135
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +1
Query: 595 YSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 711
++V PSP+VS +VVEPYN+VLS H L+E+TD +DNE
Sbjct: 169 FTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNE 207
Score = 36.3 bits (80), Expect = 0.024
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 183
MRE + + GQ G Q+G WE+ EHGI G
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADG 34
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 97.5 bits (232), Expect = 9e-21
Identities = 44/82 (53%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Frame = +3
Query: 255 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 431
+E+G GK+VPRA+ +DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E
Sbjct: 54 SETGAGKHVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKE 113
Query: 432 LVDAVLDVVRKECENCDCLQGF 497
+VD LD +RK +NC LQGF
Sbjct: 114 IVDLCLDRIRKLADNCTGLQGF 135
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +1
Query: 595 YSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 711
++V PSP+VS +VVEPYN+VLS H L+E+TD +DNE
Sbjct: 169 FTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNE 207
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRG 195
MRE + + GQ G Q+G WE+ EHGI P G G
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPG 38
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 92.7 bits (220), Expect = 3e-19
Identities = 41/79 (51%), Positives = 55/79 (69%)
Frame = +3
Query: 261 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 440
S GK+VPRA+ +DLEP +D V++G Y QLF P+ + + A NN+A+GHYT G E+VD
Sbjct: 117 SSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVD 176
Query: 441 AVLDVVRKECENCDCLQGF 497
LD +RK +NC LQGF
Sbjct: 177 LCLDRLRKLADNCTGLQGF 195
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +1
Query: 616 KVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 711
K+S VVEPYN+VLS H L+E+TD +DNE
Sbjct: 257 KISTAVVEPYNSVLSTHSLIEHTDVVVLLDNE 288
Score = 42.3 bits (95), Expect = 4e-04
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGV 186
MREI+ + GQ G Q+G WE+ EHGI P G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGL 35
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Frame = +3
Query: 273 YVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDAV 446
Y+PRA+L+DLEP ++ +++ Y L+ +N + GAGNNWA G Y +G ++VD +
Sbjct: 60 YIPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVVDDI 118
Query: 447 LDVVRKECENCDCLQGFQLTHPSA 518
+D++ +E + D L+GF L H A
Sbjct: 119 MDMIDREADGSDSLEGFVLCHSIA 142
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/53 (41%), Positives = 33/53 (62%)
Frame = +1
Query: 85 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEA 243
REI+ +Q GQCGNQIG +FW+ + EHGI G+ + +R V++ +A
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQA 55
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +1
Query: 568 RVPDRIMNTYSVVPSP-KVSDTVVEPYNAVLSIHQLVENTDETYCIDN 708
R +++ TYSV P+ + SD VV+PYN++L++ +L N D +DN
Sbjct: 160 RYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDN 207
>09_04_0325 + 16689613-16689772,16690043-16690329
Length = 148
Score = 31.9 bits (69), Expect = 0.52
Identities = 18/29 (62%), Positives = 19/29 (65%), Gaps = 6/29 (20%)
Frame = +3
Query: 336 AYGQLFR-----PDNFVFGQSGAGN-NWA 404
AY Q+FR PDNFVF QS AG NWA
Sbjct: 119 AYSQIFRLPRFNPDNFVFHQSVAGGINWA 147
>08_02_1147 -
24688686-24689729,24689875-24690036,24690339-24690368,
24690713-24690860,24691302-24691489
Length = 523
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +3
Query: 489 QGFQLTHPSAAAPVPAWATSSSQRSAKSTRQN 584
+GFQ PSA A A A+SS+Q SA S+++N
Sbjct: 84 EGFQALQPSAPAAAAA-ASSSAQASAGSSKKN 114
>12_01_0777 -
7095081-7096259,7096636-7096725,7096827-7096902,
7097150-7097367,7097502-7097717,7097922-7098107,
7098181-7098303,7098399-7098514,7099254-7099832,
7101485-7101517,7102485-7103679,7103732-7103797,
7104843-7104905,7105328-7105411
Length = 1407
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +3
Query: 519 AAPVPAWATSSSQRSAKSTRQNHEHILSS 605
AA VP+W + +++ SAK++ H+ + +S
Sbjct: 383 AAAVPSWLSRTTKTSAKTSSSKHQQLSNS 411
>07_01_1194 - 11325882-11326337,11327152-11327262
Length = 188
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -1
Query: 504 SVGNPGGNRSSHTPCGLHQGRRR 436
+VG PGG RSS G HQ RRR
Sbjct: 94 TVGTPGGRRSSRG--GSHQARRR 114
>03_05_0692 +
26800698-26800704,26802174-26802304,26802747-26802899,
26803025-26803092,26803739-26803745,26803931-26804038,
26804749-26804919,26805007-26805090
Length = 242
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Frame = +3
Query: 252 DAESGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGN---NWAKGHYTE 422
D + K +A+ LD T+ + RS Y Q+ + + W KGHY E
Sbjct: 148 DYLAASKIYTKALELDYFDATLYSNRSLCYLQIGKAQKALLDAKKCVKLRPKWMKGHYRE 207
Query: 423 GAELV 437
GA L+
Sbjct: 208 GAALM 212
>12_02_0931 +
24512496-24512567,24512705-24512806,24512939-24512984,
24513292-24513355,24513997-24514348,24514497-24514749,
24515069-24515311,24515399-24515518,24515710-24516158
Length = 566
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGI 171
MRE V +Q G N +G+ FW E G+
Sbjct: 1 MREAVTVQVGGFANYVGSHFWNFQDELLGL 30
>06_01_0487 -
3459853-3459917,3460058-3460408,3460991-3461114,
3461226-3461359,3462277-3462412,3462486-3462834,
3463994-3464000,3464058-3464226
Length = 444
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +3
Query: 309 GTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDA 443
G AV G G FRP SGA A G +G+ + DA
Sbjct: 12 GCWAAVARGLRGACFRPAGVAAAASGADEKGAAGGSAKGSHVHDA 56
>03_06_0601 + 34991912-34992352,34993719-34994516
Length = 412
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +3
Query: 501 LTHP--SAAAPVPAWATSSSQRSAKSTRQNHEHILSSPLAQSIR 626
L HP SAAAP+ A A ++ +++ ++ R+ E L+ +A + R
Sbjct: 137 LLHPPGSAAAPLLAMAVANQEQAEEACRRAEEFFLAGNIASAHR 180
>03_02_0319 -
7421357-7421757,7421768-7421843,7424695-7424796,
7424911-7424982
Length = 216
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGI 171
MRE V +Q G N +G+ FW E G+
Sbjct: 1 MREAVTVQVGGFANYVGSHFWNFQDELLGL 30
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,827,741
Number of Sequences: 37544
Number of extensions: 333225
Number of successful extensions: 1310
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1309
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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