Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20688
(711 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 170 7e-43
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 169 2e-42
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 168 4e-42
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 166 1e-41
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 166 1e-41
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 164 4e-41
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 164 6e-41
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 162 2e-40
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 162 2e-40
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 99 3e-21
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 99 3e-21
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 98 4e-21
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 98 4e-21
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 98 4e-21
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 98 4e-21
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 97 1e-20
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 73 1e-13
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 73 2e-13
At4g37190.1 68417.m05265 expressed protein 31 0.75
At3g28920.1 68416.m03611 zinc finger homeobox family protein / Z... 31 1.00
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 30 1.3
At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,... 30 1.7
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 29 2.3
At5g56250.2 68418.m07020 expressed protein 29 4.0
At5g56250.1 68418.m07019 expressed protein 29 4.0
At4g28550.1 68417.m04084 RabGAP/TBC domain-containing protein si... 28 5.3
At3g23480.1 68416.m02958 cyclopropane fatty acid synthase-relate... 28 5.3
At3g07470.1 68416.m00891 expressed protein contains Pfam profile... 28 7.0
At1g15880.1 68414.m01905 Golgi SNARE 11 protein identical to Gol... 28 7.0
At5g01100.1 68418.m00014 expressed protein similar to axi 1 [Nic... 27 9.3
At2g35670.1 68415.m04375 transcription factor, putative / fertil... 27 9.3
At1g29355.1 68414.m03589 expressed protein 27 9.3
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 170 bits (414), Expect = 7e-43
Identities = 72/83 (86%), Positives = 80/83 (96%)
Frame = +3
Query: 261 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 440
SGG+YVPRA+L+DLEPGTMD++RSG YGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 56 SGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 115
Query: 441 AVLDVVRKECENCDCLQGFQLTH 509
AVLDVVRKE ENCDCLQGFQ+ H
Sbjct: 116 AVLDVVRKEAENCDCLQGFQVCH 138
Score = 99.1 bits (236), Expect = 3e-21
Identities = 43/56 (76%), Positives = 50/56 (89%), Gaps = 1/56 (1%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTS-DLQLERISVYYNEAS 246
MREI+H+Q GQCGNQIG+KFWE+I +EHG+DPTG Y G S DLQLERI+VYYNEAS
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEAS 56
Score = 78.6 bits (185), Expect = 4e-15
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = +1
Query: 574 PDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 711
PDR+M T+SV PSPKVSDTVVEPYNA LS+HQLVEN DE +DNE
Sbjct: 161 PDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNE 206
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 169 bits (410), Expect = 2e-42
Identities = 71/83 (85%), Positives = 80/83 (96%)
Frame = +3
Query: 261 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 440
SGG+YVPRA+L+DLEPGTMD++RSG +GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 56 SGGRYVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 115
Query: 441 AVLDVVRKECENCDCLQGFQLTH 509
AVLDVVRKE ENCDCLQGFQ+ H
Sbjct: 116 AVLDVVRKEAENCDCLQGFQVCH 138
Score = 97.5 bits (232), Expect = 8e-21
Identities = 43/56 (76%), Positives = 50/56 (89%), Gaps = 1/56 (1%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRG-TSDLQLERISVYYNEAS 246
MREI+H+Q GQCGNQIG+KFWE+I +EHGID TG Y G T+DLQLERI+VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEAS 56
Score = 78.6 bits (185), Expect = 4e-15
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = +1
Query: 574 PDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 711
PDR+M T+SV PSPKVSDTVVEPYNA LS+HQLVEN DE +DNE
Sbjct: 161 PDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNE 206
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 168 bits (408), Expect = 4e-42
Identities = 71/83 (85%), Positives = 80/83 (96%)
Frame = +3
Query: 261 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 440
SGGKYVPRA+L+DLEPGTMD++RSG +GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 55 SGGKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 441 AVLDVVRKECENCDCLQGFQLTH 509
+VLDVVRKE ENCDCLQGFQ+ H
Sbjct: 115 SVLDVVRKEAENCDCLQGFQVCH 137
Score = 93.5 bits (222), Expect = 1e-19
Identities = 41/55 (74%), Positives = 47/55 (85%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEAS 246
MREI+H+Q GQCGNQIGAKFWE+I EHGID TG G +DLQLERI+VY+NEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEAS 55
Score = 79.0 bits (186), Expect = 3e-15
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = +1
Query: 574 PDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 711
PDR+M T+SV PSPKVSDTVVEPYNA LS+HQLVEN DE +DNE
Sbjct: 160 PDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNE 205
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 166 bits (404), Expect = 1e-41
Identities = 72/83 (86%), Positives = 79/83 (95%)
Frame = +3
Query: 261 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 440
S G+YVPRAIL+DLEPGTMD+VR+G YGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 55 SCGRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 441 AVLDVVRKECENCDCLQGFQLTH 509
AVLDVVRKE ENCDCLQGFQ+ H
Sbjct: 115 AVLDVVRKEAENCDCLQGFQVCH 137
Score = 102 bits (245), Expect = 2e-22
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEAS 246
MREI+H+Q GQCGNQIG+KFWE++ +EHGIDPTG Y G SDLQLER++VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEAS 55
Score = 78.6 bits (185), Expect = 4e-15
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = +1
Query: 574 PDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 711
PDR+M T+SV PSPKVSDTVVEPYNA LS+HQLVEN DE +DNE
Sbjct: 160 PDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNE 205
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 166 bits (403), Expect = 1e-41
Identities = 71/83 (85%), Positives = 79/83 (95%)
Frame = +3
Query: 261 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 440
S G+YVPRA+L+DLEPGTMD+VRSG YGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 55 SCGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 441 AVLDVVRKECENCDCLQGFQLTH 509
+VLDVVRKE ENCDCLQGFQ+ H
Sbjct: 115 SVLDVVRKEAENCDCLQGFQVCH 137
Score = 96.3 bits (229), Expect = 2e-20
Identities = 40/55 (72%), Positives = 49/55 (89%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEAS 246
MREI+H+Q GQCGNQIG+KFWE+++ EHGID TG Y G S+LQLER++VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEAS 55
Score = 79.0 bits (186), Expect = 3e-15
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = +1
Query: 574 PDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 711
PDR+M T+SV PSPKVSDTVVEPYNA LS+HQLVEN DE +DNE
Sbjct: 160 PDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNE 205
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 164 bits (399), Expect = 4e-41
Identities = 70/83 (84%), Positives = 79/83 (95%)
Frame = +3
Query: 261 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 440
S G++VPRA+L+DLEPGTMD+VRSG YGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 55 SCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 441 AVLDVVRKECENCDCLQGFQLTH 509
+VLDVVRKE ENCDCLQGFQ+ H
Sbjct: 115 SVLDVVRKEAENCDCLQGFQVCH 137
Score = 99.5 bits (237), Expect = 2e-21
Identities = 41/55 (74%), Positives = 49/55 (89%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEAS 246
MREI+H+Q GQCGNQIGAKFWE++ EHGID TG Y+G +DLQLER++VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEAS 55
Score = 78.6 bits (185), Expect = 4e-15
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = +1
Query: 574 PDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 711
PDR+M T+SV PSPKVSDTVVEPYNA LS+HQLVEN DE +DNE
Sbjct: 160 PDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNE 205
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 164 bits (398), Expect = 6e-41
Identities = 70/83 (84%), Positives = 79/83 (95%)
Frame = +3
Query: 261 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 440
SGGKYVPRA+L+DLEPGTMD++RSG +GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 55 SGGKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 441 AVLDVVRKECENCDCLQGFQLTH 509
+VLDVVRKE EN DCLQGFQ+ H
Sbjct: 115 SVLDVVRKEAENSDCLQGFQVCH 137
Score = 96.3 bits (229), Expect = 2e-20
Identities = 42/55 (76%), Positives = 47/55 (85%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEAS 246
MREI+H+Q GQCGNQIGAKFWE+I +EHGID TG Y G S LQLERI VY+NEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEAS 55
Score = 79.0 bits (186), Expect = 3e-15
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = +1
Query: 574 PDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 711
PDR+M T+SV PSPKVSDTVVEPYNA LS+HQLVEN DE +DNE
Sbjct: 160 PDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNE 205
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 162 bits (393), Expect = 2e-40
Identities = 69/83 (83%), Positives = 78/83 (93%)
Frame = +3
Query: 261 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 440
S G++VPRA+L+DLEPGTMD++RSG YGQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 55 SCGRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 441 AVLDVVRKECENCDCLQGFQLTH 509
+VLDVVRKE ENCDCLQGFQ+ H
Sbjct: 115 SVLDVVRKEAENCDCLQGFQVCH 137
Score = 103 bits (247), Expect = 1e-22
Identities = 44/55 (80%), Positives = 49/55 (89%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEAS 246
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y G SDLQLERI+VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEAS 55
Score = 78.6 bits (185), Expect = 4e-15
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = +1
Query: 574 PDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 711
PDR+M T+SV PSPKVSDTVVEPYNA LS+HQLVEN DE +DNE
Sbjct: 160 PDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNE 205
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 162 bits (393), Expect = 2e-40
Identities = 69/83 (83%), Positives = 78/83 (93%)
Frame = +3
Query: 261 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 440
S G++VPRA+L+DLEPGTMD++RSG YGQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D
Sbjct: 55 SCGRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELID 114
Query: 441 AVLDVVRKECENCDCLQGFQLTH 509
+VLDVVRKE ENCDCLQGFQ+ H
Sbjct: 115 SVLDVVRKEAENCDCLQGFQVCH 137
Score = 103 bits (247), Expect = 1e-22
Identities = 44/55 (80%), Positives = 49/55 (89%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEAS 246
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y G SDLQLERI+VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEAS 55
Score = 78.6 bits (185), Expect = 4e-15
Identities = 35/46 (76%), Positives = 39/46 (84%)
Frame = +1
Query: 574 PDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 711
PDR+M T+SV PSPKVSDTVVEPYNA LS+HQLVEN DE +DNE
Sbjct: 160 PDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNE 205
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 99.1 bits (236), Expect = 3e-21
Identities = 45/82 (54%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Frame = +3
Query: 255 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 431
+E+G GK+VPRA+ +DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E
Sbjct: 54 SETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKE 113
Query: 432 LVDAVLDVVRKECENCDCLQGF 497
+VD LD VRK +NC LQGF
Sbjct: 114 IVDLCLDRVRKLADNCTGLQGF 135
Score = 53.2 bits (122), Expect = 2e-07
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +1
Query: 595 YSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 711
+++ PSP+VS VVEPYN+VLS H L+E+TD +DNE
Sbjct: 169 FTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNE 207
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGV 186
MREI+ + GQ G Q+G WE+ EHGI P G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGM 35
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 99.1 bits (236), Expect = 3e-21
Identities = 45/82 (54%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Frame = +3
Query: 255 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 431
+E+G GK+VPRA+ +DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E
Sbjct: 54 SETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKE 113
Query: 432 LVDAVLDVVRKECENCDCLQGF 497
+VD LD VRK +NC LQGF
Sbjct: 114 IVDLCLDRVRKLADNCTGLQGF 135
Score = 53.2 bits (122), Expect = 2e-07
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +1
Query: 595 YSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 711
+++ PSP+VS VVEPYN+VLS H L+E+TD +DNE
Sbjct: 169 FTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNE 207
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGV 186
MREI+ + GQ G Q+G WE+ EHGI P G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGM 35
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 98.3 bits (234), Expect = 4e-21
Identities = 44/82 (53%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Frame = +3
Query: 255 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 431
+E+G GK+VPRA+ +DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E
Sbjct: 54 SETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKE 113
Query: 432 LVDAVLDVVRKECENCDCLQGF 497
+VD LD +RK +NC LQGF
Sbjct: 114 IVDLCLDRIRKLADNCTGLQGF 135
Score = 54.4 bits (125), Expect = 7e-08
Identities = 23/39 (58%), Positives = 32/39 (82%)
Frame = +1
Query: 595 YSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 711
++V PSP+VS +VVEPYN+VLS H L+E+TD + +DNE
Sbjct: 169 FTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNE 207
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRG 195
MRE + + GQ G Q+G WE+ EHGI P G G
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPG 38
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 98.3 bits (234), Expect = 4e-21
Identities = 44/82 (53%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Frame = +3
Query: 255 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 431
+E+G GK+VPRA+ +DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E
Sbjct: 54 SETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKE 113
Query: 432 LVDAVLDVVRKECENCDCLQGF 497
+VD LD +RK +NC LQGF
Sbjct: 114 IVDLCLDRIRKLADNCTGLQGF 135
Score = 54.4 bits (125), Expect = 7e-08
Identities = 23/39 (58%), Positives = 32/39 (82%)
Frame = +1
Query: 595 YSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 711
++V PSP+VS +VVEPYN+VLS H L+E+TD + +DNE
Sbjct: 169 FTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNE 207
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRG 195
MRE + + GQ G Q+G WE+ EHGI P G G
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPG 38
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 98.3 bits (234), Expect = 4e-21
Identities = 44/82 (53%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Frame = +3
Query: 255 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 431
+E+G GK+VPRA+ +DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E
Sbjct: 54 SETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKE 113
Query: 432 LVDAVLDVVRKECENCDCLQGF 497
+VD LD +RK +NC LQGF
Sbjct: 114 IVDLCLDRIRKLADNCTGLQGF 135
Score = 54.4 bits (125), Expect = 7e-08
Identities = 23/39 (58%), Positives = 32/39 (82%)
Frame = +1
Query: 595 YSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 711
++V PSP+VS +VVEPYN+VLS H L+E+TD + +DNE
Sbjct: 169 FTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNE 207
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 183
MRE + + GQ G Q+G WE+ EHGI P G
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDG 34
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 98.3 bits (234), Expect = 4e-21
Identities = 44/82 (53%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Frame = +3
Query: 255 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 431
+E+G GK+VPRA+ +DLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E
Sbjct: 54 SETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKE 113
Query: 432 LVDAVLDVVRKECENCDCLQGF 497
+VD LD +RK +NC LQGF
Sbjct: 114 IVDLCLDRIRKLADNCTGLQGF 135
Score = 54.4 bits (125), Expect = 7e-08
Identities = 23/39 (58%), Positives = 32/39 (82%)
Frame = +1
Query: 595 YSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 711
++V PSP+VS +VVEPYN+VLS H L+E+TD + +DNE
Sbjct: 169 FTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNE 207
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTG 183
MRE + + GQ G Q+G WE+ EHGI P G
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDG 34
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 97.1 bits (231), Expect = 1e-20
Identities = 42/79 (53%), Positives = 56/79 (70%)
Frame = +3
Query: 261 SGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 440
S G++VPRA+ LDLEP +D VR+G Y QLF P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 57 SSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVD 116
Query: 441 AVLDVVRKECENCDCLQGF 497
L+ +RK +NC LQGF
Sbjct: 117 TCLERLRKLADNCTGLQGF 135
Score = 53.2 bits (122), Expect = 2e-07
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +1
Query: 595 YSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 711
+++ PSP+VS VVEPYN+VLS H L+E+TD +DNE
Sbjct: 169 FTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNE 207
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQL--ERISVYYNEAS 246
MREI+ + GQ G Q+G WE+ EHGI P G S + + + +++E S
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETS 57
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 73.3 bits (172), Expect = 1e-13
Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Frame = +3
Query: 273 YVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDAV 446
Y+PRA+L+DLEP ++ +++G Y L+ +N GAGNNWA G Y +G + + +
Sbjct: 60 YIPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEI 118
Query: 447 LDVVRKECENCDCLQGFQLTHPSA 518
+D++ +E + D L+GF L H A
Sbjct: 119 MDMIDREADGSDSLEGFVLCHSIA 142
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = +1
Query: 85 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEA 243
REI+ LQ GQCGNQIG +FW+ + EHGI G+ + +R V++ +A
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQA 55
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +1
Query: 568 RVPDRIMNTYSVVPSP-KVSDTVVEPYNAVLSIHQLVENTDETYCIDN 708
R +++ TYSV P+ + SD VV+PYN++L++ +L N D +DN
Sbjct: 160 RYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDN 207
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 72.5 bits (170), Expect = 2e-13
Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Frame = +3
Query: 273 YVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDAV 446
Y+PRA+L+DLEP ++ +++G Y L+ +N GAGNNWA G Y +G + + +
Sbjct: 60 YIPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEI 118
Query: 447 LDVVRKECENCDCLQGFQLTHPSA 518
+D++ +E + D L+GF L H A
Sbjct: 119 MDMIDREADGSDSLEGFVLCHSIA 142
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = +1
Query: 85 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEA 243
REI+ LQ GQCGNQIG +FW+ + EHGI G+ + +R V++ +A
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQA 55
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +1
Query: 568 RVPDRIMNTYSVVPSP-KVSDTVVEPYNAVLSIHQLVENTDETYCIDN 708
R +++ TYSV P+ + SD VV+PYN++L++ +L N D +DN
Sbjct: 160 RYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDN 207
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 31.1 bits (67), Expect = 0.75
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 82 MREIVHLQAGQCGNQIGAKFWEIISEEHGI 171
MREIV +Q G+ N +G+ FW E G+
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGL 30
>At3g28920.1 68416.m03611 zinc finger homeobox family protein /
ZF-HD homeobox family protein contains Pfam PF04770:
ZF-HD protein dimerisation region; contains Pfam
TIGR01566: ZF-HD homeobox protein Cys/His-rich domain;
contains TIGRFAM TIGR01565: homeobox domain, ZF-HD
class; similar to ZF-HD homeobox protein (GI:13277220)
[Flaveria bidentis]
Length = 312
Score = 30.7 bits (66), Expect = 1.00
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +3
Query: 450 DVVRKECENCDCLQGFQL--THPSAAAPVPAWATSSSQRSAKSTRQNHEHILSSPLA 614
D +C C C + F T S+A P P+ SS+ +A + +H H PLA
Sbjct: 84 DPTSLKCAACGCHRNFHRRETDDSSAVPPPSLLPSSTTTAAIEYQPHHRHHPPPPLA 140
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +3
Query: 453 VVRKECENCDCLQGF 497
VVRKE ENC+CLQ F
Sbjct: 7 VVRKEAENCNCLQVF 21
>At2g32810.1 68415.m04016 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase GI:7939617 from
[Lycopersicon esculentum]
Length = 887
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 73 VVTMREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRG 195
V+ + + QA G IG ++W IIS++ G D T YRG
Sbjct: 668 VLNLESMGRGQAWVNGQHIG-RYWNIISQKDGCDRTCDYRG 707
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 79 TMREIVHLQAGQCGNQIGAKFWEIISE 159
T +I++ A + G+ GA FWE+ISE
Sbjct: 343 TTYDIIYASAQKGGSAAGALFWEVISE 369
>At5g56250.2 68418.m07020 expressed protein
Length = 811
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 581 ES*THTQ*SPRPKYQTLSSNHTTQFSPSIN 670
E +H + SP+P Q L + T Q SPS+N
Sbjct: 760 EEPSHNESSPKPTSQFLDLSKTQQASPSVN 789
>At5g56250.1 68418.m07019 expressed protein
Length = 811
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 581 ES*THTQ*SPRPKYQTLSSNHTTQFSPSIN 670
E +H + SP+P Q L + T Q SPS+N
Sbjct: 760 EEPSHNESSPKPTSQFLDLSKTQQASPSVN 789
>At4g28550.1 68417.m04084 RabGAP/TBC domain-containing protein
similar to SP|P09379 GTPase-activating protein GYP7
(Fragment) {Yarrowia lipolytica}; contains Pfam profile
PF00566: TBC domain
Length = 424
Score = 28.3 bits (60), Expect = 5.3
Identities = 23/71 (32%), Positives = 25/71 (35%)
Frame = +3
Query: 486 LQGFQLTHPSAAAPVPAWATSSSQRSAKSTRQNHEHILSSPLAQSIRHCRRTIQRSSLHP 665
LQGF A VP S S R+ H R RR IQR +HP
Sbjct: 15 LQGFYPVREECVADVPRTRFKSRAGKTLSARKWHAAFTGDGHLDMERVLRR-IQRGGIHP 73
Query: 666 STSREYRRNLL 698
S E LL
Sbjct: 74 SIKGEVWEFLL 84
>At3g23480.1 68416.m02958 cyclopropane fatty acid synthase-related
similar to cyclopropane synthase [Sterculia foetida]
GI:21069167
Length = 513
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 597 LSSPLAQSIRHCRRTIQRSSLHP-STSREYRRNLLHRQR 710
++S +A S R C ++ +H T R +R+NLL RQ+
Sbjct: 358 VTSAMASSSRLCIENVENIGIHYYPTLRYWRKNLLERQK 396
>At3g07470.1 68416.m00891 expressed protein contains Pfam profile
PF04398: Protein of unknown function, DUF538
Length = 169
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1
Query: 166 GIDPTGVYRGTSDLQLERISVYYNEASVA 252
GI P GV T D++ R SVY N+A A
Sbjct: 43 GIFPKGVREFTFDVETGRFSVYLNQACEA 71
>At1g15880.1 68414.m01905 Golgi SNARE 11 protein identical to Golgi
SNARE 11 protein (GI:13898893) {Arabidopsis thaliana};
similar to putative cis-Golgi SNARE protein GI:2583133
from [Arabidopsis thaliana];similar toSP|O95249| 28 kDa
Golgi SNARE protein (28 kDa cis-Golgi SNARE p28)
(GOS-28). [Homo sapiens]; similar to Golgi SNARE protein
(Golgi SNAP receptor complex member 1) (28 kDa cis-Golgi
SNARE p28) (GOS-28) (SP:Q62931) {Rattus norvegicus}
Length = 223
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/55 (25%), Positives = 23/55 (41%)
Frame = +3
Query: 522 APVPAWATSSSQRSAKSTRQNHEHILSSPLAQSIRHCRRTIQRSSLHPSTSREYR 686
A + AW +S T H+ IL + RH R +++ H S ++R
Sbjct: 63 AQMQAWVSSGGSEMVSHTLTRHQEILQDLTQEFYRH-RSSLRAKQEHASLLEDFR 116
>At5g01100.1 68418.m00014 expressed protein similar to axi 1
[Nicotiana tabacum] GI:559921; contains Pfam profile
PF03138: Plant protein family
Length = 631
Score = 27.5 bits (58), Expect = 9.3
Identities = 8/30 (26%), Positives = 22/30 (73%)
Frame = +3
Query: 507 HPSAAAPVPAWATSSSQRSAKSTRQNHEHI 596
+PS+++ +PA T++++R ++++H H+
Sbjct: 8 NPSSSSQLPAAPTTTTRRRVADSQEDHSHV 37
>At2g35670.1 68415.m04375 transcription factor, putative /
fertilization-independent seed 2 protein (FIS2)
identical to GB:AF096095
Length = 632
Score = 27.5 bits (58), Expect = 9.3
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +3
Query: 552 SQRSAKSTRQNHEHILSSPLAQSIR---HCRRTIQRSSLHPS---TSREYRRNLLHRQR 710
S + KSTR+N ++I S P +S + + T Q + PS +R RR LH +R
Sbjct: 413 SSKKNKSTRKNDDNIPSPPKTRSSKKTSNILATTQPAKAEPSEPKVTRVSRRKELHAER 471
>At1g29355.1 68414.m03589 expressed protein
Length = 307
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +3
Query: 498 QLTHPSAAAPVPAWATSSSQRSAKSTRQNHEHILSSPLAQSIRHCRRTIQRSS 656
++ +PS+ +P + S +R T +NH H SS +++ RR Q S
Sbjct: 154 EIKNPSSVREIPPFKDSGRKRRYDDTLENHNHKPSSSKERAV--TRRMNQNKS 204
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,841,833
Number of Sequences: 28952
Number of extensions: 239676
Number of successful extensions: 936
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 932
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1535986264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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