Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20685
         (754 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   147   9e-38
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   147   9e-38
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...   125   4e-31
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    27   0.16 
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   6.0  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  147 bits (356), Expect = 9e-38
 Identities = 67/90 (74%), Positives = 81/90 (90%)
 Frame = +2

Query: 2   RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKD 181
           RNVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFDNR+V +  Q+FK+K+K D
Sbjct: 21  RNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVEYCTQDFKKKHKAD 80

Query: 182 LATNKRALRRLRTACERAKRTLSSSHKRAL 271
           ++ N RALRRLRT CERAKRTLSS+ + ++
Sbjct: 81  ISGNPRALRRLRTQCERAKRTLSSATQASI 110



 Score =  124 bits (298), Expect = 1e-30
 Identities = 56/88 (63%), Positives = 74/88 (84%)
 Frame = +1

Query: 235 KEDLVIVTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 414
           K  L   TQASIEIDSLF+GID+ T+ITRARFE++N D F+  ++PV+K L+DAK+ K+ 
Sbjct: 99  KRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPVDKVLQDAKIGKSA 158

Query: 415 IHDIVLVGGSTRIPKVQKLLQDFFNGKE 498
           +H+IVLVGGSTRIPKVQ+L+ ++FNGKE
Sbjct: 159 VHEIVLVGGSTRIPKVQQLITEYFNGKE 186


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  147 bits (356), Expect = 9e-38
 Identities = 67/90 (74%), Positives = 81/90 (90%)
 Frame = +2

Query: 2   RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKD 181
           RNVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFDNR+V +  Q+FK+K+K D
Sbjct: 21  RNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVEYCTQDFKKKHKAD 80

Query: 182 LATNKRALRRLRTACERAKRTLSSSHKRAL 271
           ++ N RALRRLRT CERAKRTLSS+ + ++
Sbjct: 81  ISGNPRALRRLRTQCERAKRTLSSATQASI 110



 Score =  124 bits (298), Expect = 1e-30
 Identities = 56/88 (63%), Positives = 74/88 (84%)
 Frame = +1

Query: 235 KEDLVIVTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQ 414
           K  L   TQASIEIDSLF+GID+ T+ITRARFE++N D F+  ++PV+K L+DAK+ K+ 
Sbjct: 99  KRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFKKCIDPVDKVLQDAKIGKSA 158

Query: 415 IHDIVLVGGSTRIPKVQKLLQDFFNGKE 498
           +H+IVLVGGSTRIPKVQ+L+ ++FNGKE
Sbjct: 159 VHEIVLVGGSTRIPKVQQLITEYFNGKE 186


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score =  125 bits (301), Expect = 4e-31
 Identities = 53/90 (58%), Positives = 77/90 (85%)
 Frame = +2

Query: 2   RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKD 181
           +N+L++DLGGGTFDVSILTI++G+FEV +T+GDTHLGGEDFD +++++F++  K+K+KKD
Sbjct: 20  QNILVYDLGGGTFDVSILTIDNGVFEVVATSGDTHLGGEDFDQKVMDYFIKMVKQKHKKD 79

Query: 182 LATNKRALRRLRTACERAKRTLSSSHKRAL 271
           +  +K+AL++LR   E+AKR LSS HK  L
Sbjct: 80  IRADKKALQKLRREVEKAKRDLSSVHKTTL 109



 Score =  108 bits (259), Expect = 5e-26
 Identities = 51/93 (54%), Positives = 70/93 (75%)
 Frame = +1

Query: 229 EGKEDLVIVTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDK 408
           + K DL  V + ++ I++L    DF  ++TRA+FEELN D F  T++PV+K L DA M K
Sbjct: 96  KAKRDLSSVHKTTLTIENLLADYDFSETLTRAKFEELNNDQFLKTLKPVKKVLEDADMTK 155

Query: 409 AQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNK 507
            QI +IVLVGGSTRIPK+Q+L++DFF+GKELN+
Sbjct: 156 DQIDEIVLVGGSTRIPKIQQLIKDFFDGKELNR 188


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = -1

Query: 418 GFEPY-PSWHHGETSPLAPW*T*TDRRSAPRSEHE 317
           GF P+ PS H G   P  PW T  D R   +  H+
Sbjct: 468 GFGPWKPSMHGGVCDPYTPWHTFYDYRPWVQHGHQ 502


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 433 PVQYRGFEPYPSWHHGETSPLAP 365
           PV      P+ + HHG T P +P
Sbjct: 17  PVVLDVIPPHYNIHHGATPPQSP 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,988
Number of Sequences: 336
Number of extensions: 3909
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)