Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20684
(736 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC064350-1|AAH64350.1| 801|Homo sapiens MAP7D3 protein protein. 35 0.35
AL078638-13|CAM21578.1| 802|Homo sapiens MAP7 domain containing... 35 0.35
AL078638-12|CAI41063.2| 876|Homo sapiens MAP7 domain containing... 35 0.35
AL078638-11|CAI41064.2| 841|Homo sapiens MAP7 domain containing... 35 0.35
AK022463-1|BAB14044.1| 507|Homo sapiens protein ( Homo sapiens ... 35 0.35
BC040518-1|AAH40518.1| 904|Homo sapiens MAP7D3 protein protein. 33 1.1
Z82901-1|CAI42864.2| 1593|Homo sapiens THO complex 2 protein. 31 3.2
BC072400-1|AAH72400.1| 414|Homo sapiens THOC2 protein protein. 31 3.2
AL030996-5|CAI42273.1| 387|Homo sapiens THO complex 2 protein. 31 3.2
AL030996-3|CAI42271.2| 1593|Homo sapiens THO complex 2 protein. 31 3.2
AL023575-1|CAO03594.1| 1593|Homo sapiens THO complex 2 protein. 31 3.2
AF441770-1|AAM28436.1| 1478|Homo sapiens Tho2 protein. 31 3.2
>BC064350-1|AAH64350.1| 801|Homo sapiens MAP7D3 protein protein.
Length = 801
Score = 34.7 bits (76), Expect = 0.35
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +2
Query: 128 EVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEVRLLKMVMLKKATMHLRT 307
EVAP+E PKES ++ SP V+A+ E + +P+ + KK+ M +
Sbjct: 381 EVAPKESVKGSPKES-MEASPEAMVKASPKTSLEASMEASPKAKARDAP--KKSEMDKQA 437
Query: 308 VMPQKRKRL 334
++P +KRL
Sbjct: 438 LIPIAKKRL 446
>AL078638-13|CAM21578.1| 802|Homo sapiens MAP7 domain containing 3
protein.
Length = 802
Score = 34.7 bits (76), Expect = 0.35
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +2
Query: 128 EVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEVRLLKMVMLKKATMHLRT 307
EVAP+E PKES ++ SP V+A+ E + +P+ + KK+ M +
Sbjct: 382 EVAPKESVKGSPKES-MEASPEAMVKASPKTSLEASMEASPKAKARDAP--KKSEMDKQA 438
Query: 308 VMPQKRKRL 334
++P +KRL
Sbjct: 439 LIPIAKKRL 447
>AL078638-12|CAI41063.2| 876|Homo sapiens MAP7 domain containing 3
protein.
Length = 876
Score = 34.7 bits (76), Expect = 0.35
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +2
Query: 128 EVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEVRLLKMVMLKKATMHLRT 307
EVAP+E PKES ++ SP V+A+ E + +P+ + KK+ M +
Sbjct: 423 EVAPKESVKGSPKES-MEASPEAMVKASPKTSLEASMEASPKAKARDAP--KKSEMDKQA 479
Query: 308 VMPQKRKRL 334
++P +KRL
Sbjct: 480 LIPIAKKRL 488
>AL078638-11|CAI41064.2| 841|Homo sapiens MAP7 domain containing 3
protein.
Length = 841
Score = 34.7 bits (76), Expect = 0.35
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +2
Query: 128 EVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEVRLLKMVMLKKATMHLRT 307
EVAP+E PKES ++ SP V+A+ E + +P+ + KK+ M +
Sbjct: 388 EVAPKESVKGSPKES-MEASPEAMVKASPKTSLEASMEASPKAKARDAP--KKSEMDKQA 444
Query: 308 VMPQKRKRL 334
++P +KRL
Sbjct: 445 LIPIAKKRL 453
>AK022463-1|BAB14044.1| 507|Homo sapiens protein ( Homo sapiens
cDNA FLJ12401 fis, clone MAMMA1002796. ).
Length = 507
Score = 34.7 bits (76), Expect = 0.35
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +2
Query: 128 EVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEVRLLKMVMLKKATMHLRT 307
EVAP+E PKES ++ SP V+A+ E + +P+ + KK+ M +
Sbjct: 289 EVAPKESVKGSPKES-MEASPEAMVKASPKTSLEASMEASPKAKARDAP--KKSEMDKQA 345
Query: 308 VMPQKRKRL 334
++P +KRL
Sbjct: 346 LIPIAKKRL 354
>BC040518-1|AAH40518.1| 904|Homo sapiens MAP7D3 protein protein.
Length = 904
Score = 33.1 bits (72), Expect = 1.1
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = +2
Query: 128 EVAPEEVTSTEPKESPVKKSPAKKVEAAESNGKENGTDEAPEVRLLKMVMLKKATMHLRT 307
EVAP+E PKES ++ SP V+ + E + +P+ + KK+ M +
Sbjct: 451 EVAPKESVKGSPKES-MEASPEAMVKTSPKTSLEASMEASPKAKARDAP--KKSEMDKQA 507
Query: 308 VMPQKRKRL 334
++P +KRL
Sbjct: 508 LIPIAKKRL 516
>Z82901-1|CAI42864.2| 1593|Homo sapiens THO complex 2 protein.
Length = 1593
Score = 31.5 bits (68), Expect = 3.2
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 152 STEPKESPVKKSPAKKVEAAESNGKENGTDEAPEVRLLKMVM-LKKATMHLRTVMPQKRK 328
S P ESP K+ ++S+GKE G+D ++ K+ KK + H + + +K K
Sbjct: 1514 SESPCESPYPNEKDKEKNKSKSSGKEKGSDSFKSEKMDKISSGGKKESRHDKEKIEKKEK 1573
Query: 329 R 331
R
Sbjct: 1574 R 1574
>BC072400-1|AAH72400.1| 414|Homo sapiens THOC2 protein protein.
Length = 414
Score = 31.5 bits (68), Expect = 3.2
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 152 STEPKESPVKKSPAKKVEAAESNGKENGTDEAPEVRLLKMVM-LKKATMHLRTVMPQKRK 328
S P ESP K+ ++S+GKE G+D ++ K+ KK + H + + +K K
Sbjct: 335 SESPCESPYPNEKDKEKNKSKSSGKEKGSDSFKSEKMDKISSGGKKESRHDKEKIEKKEK 394
Query: 329 R 331
R
Sbjct: 395 R 395
>AL030996-5|CAI42273.1| 387|Homo sapiens THO complex 2 protein.
Length = 387
Score = 31.5 bits (68), Expect = 3.2
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 152 STEPKESPVKKSPAKKVEAAESNGKENGTDEAPEVRLLKMVM-LKKATMHLRTVMPQKRK 328
S P ESP K+ ++S+GKE G+D ++ K+ KK + H + + +K K
Sbjct: 308 SESPCESPYPNEKDKEKNKSKSSGKEKGSDSFKSEKMDKISSGGKKESRHDKEKIEKKEK 367
Query: 329 R 331
R
Sbjct: 368 R 368
>AL030996-3|CAI42271.2| 1593|Homo sapiens THO complex 2 protein.
Length = 1593
Score = 31.5 bits (68), Expect = 3.2
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 152 STEPKESPVKKSPAKKVEAAESNGKENGTDEAPEVRLLKMVM-LKKATMHLRTVMPQKRK 328
S P ESP K+ ++S+GKE G+D ++ K+ KK + H + + +K K
Sbjct: 1514 SESPCESPYPNEKDKEKNKSKSSGKEKGSDSFKSEKMDKISSGGKKESRHDKEKIEKKEK 1573
Query: 329 R 331
R
Sbjct: 1574 R 1574
>AL023575-1|CAO03594.1| 1593|Homo sapiens THO complex 2 protein.
Length = 1593
Score = 31.5 bits (68), Expect = 3.2
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 152 STEPKESPVKKSPAKKVEAAESNGKENGTDEAPEVRLLKMVM-LKKATMHLRTVMPQKRK 328
S P ESP K+ ++S+GKE G+D ++ K+ KK + H + + +K K
Sbjct: 1514 SESPCESPYPNEKDKEKNKSKSSGKEKGSDSFKSEKMDKISSGGKKESRHDKEKIEKKEK 1573
Query: 329 R 331
R
Sbjct: 1574 R 1574
>AF441770-1|AAM28436.1| 1478|Homo sapiens Tho2 protein.
Length = 1478
Score = 31.5 bits (68), Expect = 3.2
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 152 STEPKESPVKKSPAKKVEAAESNGKENGTDEAPEVRLLKMVM-LKKATMHLRTVMPQKRK 328
S P ESP K+ ++S+GKE G+D ++ K+ KK + H + + +K K
Sbjct: 1399 SESPCESPYPNEKDKEKNKSKSSGKEKGSDSFKSEKMDKISSGGKKESRHDKEKIEKKEK 1458
Query: 329 R 331
R
Sbjct: 1459 R 1459
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,310,180
Number of Sequences: 237096
Number of extensions: 1679977
Number of successful extensions: 5417
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5396
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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