Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20683
         (707 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    26   0.26 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.80 
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   2.4  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   2.4  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   7.4  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   9.8  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   9.8  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -2

Query: 457 SARLHVPAVR*CYSFNNITRSHYQFFSGQSNVHLFDRY 344
           SA LH+PA R  Y    + R H Q+     N H F++Y
Sbjct: 52  SAPLHIPAKRAAYDCEGVIRHHGQWNYSPDN-H-FEQY 87


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -3

Query: 510 FCSLESQAQCGSCNETHSLHDCTFPQ 433
           FC+       G C   H+ H CT P+
Sbjct: 341 FCATSPCQNGGVCTTIHAGHKCTCPE 366


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 393 TINFSVVRATCICLIG 346
           +  F +VR  C+CL G
Sbjct: 325 SFGFLIVRTVCLCLFG 340


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 393 TINFSVVRATCICLIG 346
           +  F +VR  C+CL G
Sbjct: 325 SFGFLIVRTVCLCLFG 340


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 218 W*SHQSC*CCL*QGVFDASV 277
           W   +SC CC   G  +ASV
Sbjct: 81  WQMERSCMCCQESGEREASV 100


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 495 SQAQCGSCNETHSLHDC 445
           S+ +CGS  E   + DC
Sbjct: 409 SEKKCGSLREIKEVSDC 425


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = -1

Query: 578 FPCSTFCKNLSGFGNCLFPTHEHFVPWSPKRS 483
           F    F K L+GFG        H  P   KRS
Sbjct: 106 FKLPYFWKMLTGFGKIEQVLPPHHAPEEKKRS 137


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,855
Number of Sequences: 336
Number of extensions: 3371
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)