Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20683
(707 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC042914-1|AAH42914.1| 785|Homo sapiens sema domain, immunoglob... 66 1e-10
AC000063-1|AAB46344.1| 785|Homo sapiens semaphorin IV protein. 66 1e-10
AB209259-1|BAD92496.1| 750|Homo sapiens semaphorin 3F variant p... 66 1e-10
U33920-1|AAC50568.1| 785|Homo sapiens semaphorin protein. 65 2e-10
U38276-1|AAB18276.1| 753|Homo sapiens semaphorin III family hom... 65 3e-10
AK027867-1|BAB55418.1| 418|Homo sapiens protein ( Homo sapiens ... 62 2e-09
AK027501-1|BAB55158.1| 699|Homo sapiens protein ( Homo sapiens ... 62 2e-09
AF279656-1|AAG29378.1| 1030|Homo sapiens semaphorin SEMA6A1 prot... 62 2e-09
AB037789-1|BAA92606.1| 1049|Homo sapiens KIAA1368 protein protein. 62 2e-09
L26081-1|AAA65938.1| 771|Homo sapiens semaphorin-III protein. 61 3e-09
BC111416-1|AAI11417.1| 771|Homo sapiens sema domain, immunoglob... 61 3e-09
AC073221-1|AAP22350.1| 301|Homo sapiens unknown protein. 61 3e-09
BC030690-1|AAH30690.1| 751|Homo sapiens sema domain, immunoglob... 61 4e-09
AB000220-1|BAA32398.1| 751|Homo sapiens semaphorin E protein. 61 4e-09
BC038411-1|AAH38411.1| 770|Homo sapiens sema domain, immunoglob... 60 1e-08
BC029590-1|AAH29590.1| 416|Homo sapiens SEMA3D protein protein. 60 1e-08
BC018361-1|AAH18361.1| 615|Homo sapiens SEMA4F protein protein. 60 1e-08
AY358937-1|AAQ89296.1| 777|Homo sapiens Collapsin-2 protein. 60 1e-08
AK075384-1|BAC11584.1| 770|Homo sapiens protein ( Homo sapiens ... 60 1e-08
AF053369-1|AAF80660.1| 424|Homo sapiens semaphorin M protein. 60 1e-08
AC079799-1|AAS07488.1| 591|Homo sapiens unknown protein. 60 1e-08
AB022317-1|BAA75631.1| 615|Homo sapiens semaphorin W protein. 60 1e-08
AB002329-1|BAA20789.2| 814|Homo sapiens KIAA0331 protein. 60 1e-08
U73167-5|AAC02731.1| 750|Homo sapiens semaphorin V protein. 59 2e-08
U28369-1|AAD09138.1| 749|Homo sapiens semaphorin V protein. 59 2e-08
BC044602-1|AAH44602.1| 573|Homo sapiens SEMA3B protein protein. 59 2e-08
BC024220-1|AAH24220.1| 748|Homo sapiens sema domain, immunoglob... 59 2e-08
BC013975-1|AAH13975.1| 748|Homo sapiens sema domain, immunoglob... 59 2e-08
BC009113-1|AAH09113.1| 635|Homo sapiens SEMA3B protein protein. 59 2e-08
AB209322-1|BAD92559.1| 498|Homo sapiens semaphorin 3B isoform 2... 59 2e-08
AB083186-1|BAB88870.1| 754|Homo sapiens semaphorin 3B protein. 59 2e-08
BC109104-1|AAI09105.1| 833|Homo sapiens sema domain, immunoglob... 57 7e-08
BC109103-1|AAI09104.1| 833|Homo sapiens sema domain, immunoglob... 57 7e-08
BC062984-1|AAH62984.1| 543|Homo sapiens SEMA4C protein protein. 57 7e-08
BC017476-1|AAH17476.2| 645|Homo sapiens SEMA4C protein protein. 57 7e-08
AY358842-1|AAQ89201.1| 833|Homo sapiens SEMA4C protein. 57 7e-08
AC092636-5|AAY14967.1| 510|Homo sapiens unknown protein. 57 7e-08
AB051526-1|BAB21830.1| 963|Homo sapiens KIAA1739 protein protein. 57 7e-08
U60800-1|AAC50810.1| 862|Homo sapiens semaphorin protein. 56 2e-07
BC054500-1|AAH54500.1| 862|Homo sapiens sema domain, immunoglob... 56 2e-07
AL929575-4|CAI43250.2| 862|Homo sapiens sema domain, immunoglob... 56 2e-07
AL590233-3|CAI17379.2| 862|Homo sapiens sema domain, immunoglob... 56 2e-07
AB210030-1|BAE06112.1| 870|Homo sapiens SEMA4D variant protein ... 56 2e-07
BC142617-1|AAI42618.1| 888|Homo sapiens sema domain, transmembr... 55 2e-07
AY358939-1|AAQ89298.1| 888|Homo sapiens semaphorin Z protein. 55 2e-07
AF293363-1|AAK16831.1| 687|Homo sapiens semaphorin 6B isoform 2... 55 2e-07
AF216389-1|AAF87661.1| 517|Homo sapiens semaphorin 6B isoform 1... 55 2e-07
AB209278-1|BAD92515.1| 518|Homo sapiens semaphorin 6B isoform 3... 55 2e-07
AB022433-1|BAB20669.1| 888|Homo sapiens semaphorin Z protein. 55 2e-07
BC099724-1|AAH99724.1| 782|Homo sapiens sema domain, immunoglob... 54 4e-07
BC098137-1|AAH98137.1| 782|Homo sapiens sema domain, immunoglob... 54 4e-07
BC098104-1|AAH98104.1| 782|Homo sapiens semaphorin sem2 protein. 54 4e-07
AK024425-1|BAB15715.1| 725|Homo sapiens FLJ00014 protein protein. 54 4e-07
AB029496-1|BAA98132.1| 782|Homo sapiens semaphorin sem2 protein. 54 4e-07
AK000376-1|BAA91124.1| 510|Homo sapiens protein ( Homo sapiens ... 54 5e-07
BC150253-1|AAI50254.1| 1011|Homo sapiens SEMA6D protein protein. 54 7e-07
AK021660-1|BAB13869.1| 367|Homo sapiens protein ( Homo sapiens ... 54 7e-07
AF389430-1|AAM69453.1| 1011|Homo sapiens semaphorin 6D isoform 1... 54 7e-07
AF389429-1|AAM69452.1| 1073|Homo sapiens semaphorin 6D isoform 4... 54 7e-07
AF389428-1|AAM69451.1| 1017|Homo sapiens semaphorin 6D isoform 3... 54 7e-07
AF389427-1|AAM69450.1| 998|Homo sapiens semaphorin 6D isoform 2... 54 7e-07
AF389426-1|AAM69449.1| 476|Homo sapiens semaphorin 6D short iso... 54 7e-07
AB040912-1|BAA96003.2| 1022|Homo sapiens KIAA1479 protein protein. 54 7e-07
BX537671-1|CAD97806.1| 681|Homo sapiens hypothetical protein pr... 53 1e-06
BC126438-1|AAI26439.1| 837|Homo sapiens sema domain, immunoglob... 53 1e-06
BC110853-1|AAI10854.1| 837|Homo sapiens sema domain, immunoglob... 53 1e-06
BC094849-1|AAH94849.1| 521|Homo sapiens SEMA4B protein protein. 53 1e-06
BC017658-1|AAH17658.1| 458|Homo sapiens SEMA4B protein protein. 53 1e-06
BC010701-1|AAH10701.2| 530|Homo sapiens SEMA4B protein protein. 53 1e-06
AY445887-1|AAR15707.1| 837|Homo sapiens semaphorin 4b precursor... 53 1e-06
AY358392-1|AAQ88758.1| 837|Homo sapiens semaphorin C protein. 53 1e-06
AL390081-1|CAB98205.1| 673|Homo sapiens SEMA4B, Semaphorin 4B p... 53 1e-06
AK026133-1|BAB15372.1| 380|Homo sapiens protein ( Homo sapiens ... 53 1e-06
AB051532-1|BAB21836.1| 893|Homo sapiens KIAA1745 protein protein. 53 1e-06
BC020974-1|AAH20974.1| 761|Homo sapiens sema domain, immunoglob... 51 4e-06
AY358531-1|AAQ88895.1| 761|Homo sapiens semaphorin B protein. 51 4e-06
AL135927-14|CAI15533.1| 629|Homo sapiens sema domain, immunoglo... 51 4e-06
AL135927-12|CAI15531.1| 723|Homo sapiens sema domain, immunoglo... 51 4e-06
AL135927-11|CAI15530.1| 761|Homo sapiens sema domain, immunoglo... 51 4e-06
AK022349-1|BAB14018.1| 328|Homo sapiens protein ( Homo sapiens ... 51 4e-06
AB029394-1|BAB20087.1| 762|Homo sapiens SEMB protein. 51 4e-06
AL592424-4|CAI16377.1| 962|Homo sapiens sema domain, transmembr... 51 5e-06
AL592424-3|CAI16378.1| 930|Homo sapiens sema domain, transmembr... 51 5e-06
AL592424-2|CAI16376.1| 922|Homo sapiens sema domain, transmembr... 51 5e-06
AF339154-1|AAL72100.1| 962|Homo sapiens semaphorin Y protein. 51 5e-06
AF339153-1|AAL72099.1| 922|Homo sapiens semaphorin Y short isof... 51 5e-06
AF339152-1|AAL72098.1| 930|Homo sapiens semaphorin Y short isof... 51 5e-06
AB058772-1|BAB47498.1| 935|Homo sapiens KIAA1869 protein protein. 51 5e-06
AB022434-1|BAB20670.1| 930|Homo sapiens semaphorin Y protein. 51 5e-06
BC128579-1|AAI28580.1| 702|Homo sapiens SEMA4G protein protein. 49 2e-05
BC110382-1|AAI10383.1| 843|Homo sapiens sema domain, immunoglob... 49 2e-05
BC051030-1|AAH51030.1| 838|Homo sapiens SEMA4G protein protein. 49 2e-05
AL133215-2|CAI10916.1| 843|Homo sapiens sema domain, immunoglob... 49 2e-05
AL133215-1|CAB92805.1| 838|Homo sapiens sema domain, immunoglob... 49 2e-05
AB046839-1|BAB13445.1| 869|Homo sapiens KIAA1619 protein protein. 49 2e-05
AB046770-1|BAB13376.3| 1462|Homo sapiens KIAA1550 protein protein. 46 1e-04
BC077726-1|AAH77726.1| 1151|Homo sapiens sema domain, seven thro... 45 2e-04
AY358124-1|AAQ88491.1| 1092|Homo sapiens SEMA5B protein. 45 2e-04
AB040878-1|BAA95969.1| 1202|Homo sapiens KIAA1445 protein protein. 45 2e-04
AK092182-1|BAC03823.1| 132|Homo sapiens protein ( Homo sapiens ... 44 7e-04
AF030339-1|AAC18823.1| 1568|Homo sapiens VESPR protein. 41 0.005
AB208934-1|BAD92171.1| 1211|Homo sapiens plexin C1 variant protein. 41 0.005
X87831-1|CAB57275.1| 1328|Homo sapiens OCT/plexin-A2 protein pro... 40 0.007
BC132676-1|AAI32677.1| 1909|Homo sapiens PLXNA2 protein protein. 40 0.007
AL590138-1|CAI39808.1| 1894|Homo sapiens plexin A2 protein. 40 0.007
AL356275-5|CAI40198.1| 1894|Homo sapiens plexin A2 protein. 40 0.007
AB007932-1|BAA32308.1| 1963|Homo sapiens KIAA0463 protein protein. 40 0.007
X87832-1|CAB57274.1| 1754|Homo sapiens NOV/plexin-A1 protein pro... 36 0.11
U52840-1|AAC09473.1| 1074|Homo sapiens semaphorin F homolog prot... 36 0.14
BC115696-1|AAI15697.1| 1074|Homo sapiens sema domain, seven thro... 36 0.14
AF055020-1|AAC09365.1| 446|Homo sapiens unknown protein. 36 0.19
AC006322-1|AAS02028.1| 287|Homo sapiens unknown protein. 34 0.43
X87904-1|CAB57277.1| 2135|Homo sapiens semaphorin receptor protein. 32 1.7
X87852-1|CAA61132.1| 1871|Homo sapiens SEX protein protein. 32 1.7
BX936365-2|CAI43194.1| 1871|Homo sapiens plexin A3 protein. 32 1.7
BC146793-1|AAI46794.1| 2135|Homo sapiens plexin B1 protein. 32 1.7
BC101647-1|AAI01648.1| 666|Homo sapiens semaphorin 7A, GPI memb... 32 1.7
BC101643-1|AAI01644.1| 666|Homo sapiens semaphorin 7A, GPI memb... 32 1.7
AY885237-1|AAW62253.1| 666|Homo sapiens sema domain, immunoglob... 32 1.7
AM180451-1|CAJ55404.1| 666|Homo sapiens semaphorin 7A protein. 32 1.7
AM180450-1|CAJ55403.1| 666|Homo sapiens semaphorin 7A protein. 32 1.7
AM180449-1|CAJ55402.1| 666|Homo sapiens semaphorin 7A protein. 32 1.7
AM180448-1|CAJ55401.1| 666|Homo sapiens semaphorin 7A protein. 32 1.7
AM180447-1|CAJ55400.1| 666|Homo sapiens semaphorin 7A protein. 32 1.7
AM180445-1|CAJ55398.1| 666|Homo sapiens semaphorin 7A protein. 32 1.7
AJ011415-1|CAB56222.1| 1952|Homo sapiens plexin-B1/SEP receptor ... 32 1.7
AJ011414-1|CAB56221.1| 729|Homo sapiens plexin-B1/SEP receptor ... 32 1.7
AF071542-1|AAC80456.1| 666|Homo sapiens semaphorin K1 protein. 32 1.7
AF069493-1|AAC82642.1| 666|Homo sapiens GPI-anchored membrane p... 32 1.7
AF030698-1|AAC34261.1| 666|Homo sapiens semaphorin L protein. 32 1.7
AF030697-1|AAC34741.1| 594|Homo sapiens semaphorin L protein. 32 1.7
AB007867-1|BAA23703.2| 2143|Homo sapiens KIAA0407 protein. 32 1.7
AK074975-1|BAC11326.1| 562|Homo sapiens protein ( Homo sapiens ... 31 3.1
AK027471-1|BAB55136.1| 562|Homo sapiens protein ( Homo sapiens ... 31 3.1
AK027439-1|BAB55111.1| 507|Homo sapiens protein ( Homo sapiens ... 31 3.1
AF149019-1|AAG01376.1| 1909|Homo sapiens plexin-B3 protein. 31 3.1
AB033032-1|BAA86520.1| 1912|Homo sapiens KIAA1206 protein protein. 31 3.1
AK027654-1|BAB55269.1| 574|Homo sapiens protein ( Homo sapiens ... 31 4.0
AM180446-1|CAJ55399.1| 666|Homo sapiens semaphorin 7A protein. 31 5.3
AK075388-1|BAC11588.1| 333|Homo sapiens protein ( Homo sapiens ... 30 7.1
X53002-1|CAA37188.1| 799|Homo sapiens protein ( Human mRNA for ... 30 9.3
M35011-1|AAA52707.1| 796|Homo sapiens ITGB5 protein. 30 9.3
J05633-1|AAA59183.1| 799|Homo sapiens ITGB5 protein. 30 9.3
BC006541-1|AAH06541.1| 799|Homo sapiens integrin, beta 5 protein. 30 9.3
AF026467-1|AAC05599.1| 85|Homo sapiens MHC class II antigen HL... 30 9.3
>BC042914-1|AAH42914.1| 785|Homo sapiens sema domain,
immunoglobulin domain (Ig), short basic domain,
secreted, (semapho protein.
Length = 785
Score = 66.1 bits (154), Expect = 1e-10
Identities = 32/76 (42%), Positives = 51/76 (67%)
Frame = +3
Query: 12 VEDSRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKY 191
++ ++ DEV+NF+++HPLM +AV RP+++R YR + IAV QV A +G +Y
Sbjct: 421 MKSTKDYPDEVINFMRSHPLMYQAVYPLQRRPLVVRTGAPYRLTTIAV-DQVDAADG-RY 478
Query: 192 DVLYIGTDDGRVIKAV 239
+VL++GTD G V K +
Sbjct: 479 EVLFLGTDRGTVQKVI 494
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNV-QSCRECVSLQDPHC 487
++ E +V P+K M ++ ++L VAS + ++L C +C +C +DP+C
Sbjct: 507 MLEEVEVFKDPAPVKTMTISSKRQQLYVASAVGVTHLSLHRCQAYGAACADCCLARDPYC 566
Query: 488 AWDSK 502
AWD +
Sbjct: 567 AWDGQ 571
>AC000063-1|AAB46344.1| 785|Homo sapiens semaphorin IV protein.
Length = 785
Score = 66.1 bits (154), Expect = 1e-10
Identities = 32/76 (42%), Positives = 51/76 (67%)
Frame = +3
Query: 12 VEDSRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKY 191
++ ++ DEV+NF+++HPLM +AV RP+++R YR + IAV QV A +G +Y
Sbjct: 421 MKSTKDYPDEVINFMRSHPLMYQAVYPLQRRPLVVRTGAPYRLTTIAV-DQVDAADG-RY 478
Query: 192 DVLYIGTDDGRVIKAV 239
+VL++GTD G V K +
Sbjct: 479 EVLFLGTDRGTVQKVI 494
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNV-QSCRECVSLQDPHC 487
++ E +V P+K M ++ ++L VAS + ++L C +C +C +DP+C
Sbjct: 507 MLEEVEVFKDPAPVKTMTISSKRQQLYVASAVGVTHLSLHRCQAYGAACADCCLARDPYC 566
Query: 488 AWDSK 502
AWD +
Sbjct: 567 AWDGQ 571
>AB209259-1|BAD92496.1| 750|Homo sapiens semaphorin 3F variant
protein.
Length = 750
Score = 66.1 bits (154), Expect = 1e-10
Identities = 32/76 (42%), Positives = 51/76 (67%)
Frame = +3
Query: 12 VEDSRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKY 191
++ ++ DEV+NF+++HPLM +AV RP+++R YR + IAV QV A +G +Y
Sbjct: 386 MKSTKDYPDEVINFMRSHPLMYQAVYPLQRRPLVVRTGAPYRLTTIAV-DQVDAADG-RY 443
Query: 192 DVLYIGTDDGRVIKAV 239
+VL++GTD G V K +
Sbjct: 444 EVLFLGTDRGTVQKVI 459
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNV-QSCRECVSLQDPHC 487
++ E +V P+K M ++ ++L VAS + ++L C +C +C +DP+C
Sbjct: 472 MLEEVEVFKDPAPVKTMTISSKRQQLYVASAVGVTHLSLHRCQAYGAACADCCLARDPYC 531
Query: 488 AWDSK 502
AWD +
Sbjct: 532 AWDGQ 536
>U33920-1|AAC50568.1| 785|Homo sapiens semaphorin protein.
Length = 785
Score = 65.3 bits (152), Expect = 2e-10
Identities = 32/76 (42%), Positives = 51/76 (67%)
Frame = +3
Query: 12 VEDSRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKY 191
++ ++ DEV+NF+++HPLM +AV RP+++R YR + IAV QV A +G +Y
Sbjct: 421 MKSTKDYPDEVINFMRSHPLMYQAVYPLQRRPLVVRTGAPYRLTTIAV-DQVDAGDG-RY 478
Query: 192 DVLYIGTDDGRVIKAV 239
+VL++GTD G V K +
Sbjct: 479 EVLFLGTDRGTVQKVI 494
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNV-QSCRECVSLQDPHC 487
++ E +V P+K M ++ ++L VAS + ++L C +C +C +DP+C
Sbjct: 507 MLEEVEVFKDPAPVKTMTISSKRQQLYVASAVGVTHLSLHRCQAYGAACADCCLARDPYC 566
Query: 488 AWDSK 502
AWD +
Sbjct: 567 AWDGQ 571
>U38276-1|AAB18276.1| 753|Homo sapiens semaphorin III family
homolog protein.
Length = 753
Score = 64.9 bits (151), Expect = 3e-10
Identities = 31/76 (40%), Positives = 51/76 (67%)
Frame = +3
Query: 12 VEDSRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKY 191
++ ++ DEV+NF+++HPLM +AV RP+++R YR + IAV QV + +G +Y
Sbjct: 389 MKSTKDYPDEVINFMRSHPLMYQAVYPLQRRPLVVRTGAPYRLTTIAV-DQVDSADG-RY 446
Query: 192 DVLYIGTDDGRVIKAV 239
+VL++GTD G V K +
Sbjct: 447 EVLFLGTDRGTVQKVI 462
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNV-QSCRECVSLQDPHC 487
++ E +V P+K M ++ ++L VAS + ++L C +C +C +DP+C
Sbjct: 475 MLEEVEVFKDPAPVKTMTISSKRQQLYVASAVGVTHLSLHRCQAYGAACADCCLARDPYC 534
Query: 488 AWDSK 502
AWD +
Sbjct: 535 AWDGQ 539
>AK027867-1|BAB55418.1| 418|Homo sapiens protein ( Homo sapiens
cDNA FLJ14961 fis, clone PLACE4000230, highly similar to
Mus musculus semaphorin VIa mRNA. ).
Length = 418
Score = 61.7 bits (143), Expect = 2e-09
Identities = 30/82 (36%), Positives = 47/82 (57%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S D+ +NF+K HPLMD+AVPS RP +R ++YR + IAV A + V+
Sbjct: 320 SNEFPDDTLNFIKTHPLMDEAVPSIFNRPWFLRTMVRYRLTKIAV--DTAAGPYQNHTVV 377
Query: 201 YIGTDDGRVIKAVNVASNKAFL 266
++G++ G ++K + N FL
Sbjct: 378 FLGSEKGIILKFLARIGNSGFL 399
>AK027501-1|BAB55158.1| 699|Homo sapiens protein ( Homo sapiens
cDNA FLJ14595 fis, clone NT2RM4002194, highly similar to
Mus musculus semaphorin VIa mRNA. ).
Length = 699
Score = 61.7 bits (143), Expect = 2e-09
Identities = 30/82 (36%), Positives = 47/82 (57%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S D+ +NF+K HPLMD+AVPS RP +R ++YR + IAV A + V+
Sbjct: 50 SNEFPDDTLNFIKTHPLMDEAVPSIFNRPWFLRTMVRYRLTKIAV--DTAAGPYQNHTVV 107
Query: 201 YIGTDDGRVIKAVNVASNKAFL 266
++G++ G ++K + N FL
Sbjct: 108 FLGSEKGIILKFLARIGNSGFL 129
Score = 31.5 bits (68), Expect = 3.1
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +2
Query: 308 AVISEEQVLPQGVPIKQ---MHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRE-CVSLQ 475
+V + E+ GV K+ M + + L VA + V L C C++ C++ +
Sbjct: 139 SVYNSEKCSYDGVEDKRIMGMQLDRASSSLYVAFSTCVIKVPLGRCERHGKCKKTCIASR 198
Query: 476 DPHCAW 493
DP+C W
Sbjct: 199 DPYCGW 204
>AF279656-1|AAG29378.1| 1030|Homo sapiens semaphorin SEMA6A1
protein.
Length = 1030
Score = 61.7 bits (143), Expect = 2e-09
Identities = 30/82 (36%), Positives = 47/82 (57%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S D+ +NF+K HPLMD+AVPS RP +R ++YR + IAV A + V+
Sbjct: 381 SNEFPDDTLNFIKTHPLMDEAVPSIFNRPWFLRTMVRYRLTKIAV--DTAAGPYQNHTVV 438
Query: 201 YIGTDDGRVIKAVNVASNKAFL 266
++G++ G ++K + N FL
Sbjct: 439 FLGSEKGIILKFLARIGNSGFL 460
Score = 31.5 bits (68), Expect = 3.1
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +2
Query: 308 AVISEEQVLPQGVPIKQ---MHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRE-CVSLQ 475
+V + E+ GV K+ M + + L VA + V L C C++ C++ +
Sbjct: 470 SVYNSEKCSYDGVEDKRIMGMQLDRASSSLYVAFSTCVIKVPLGRCERHGKCKKTCIASR 529
Query: 476 DPHCAW 493
DP+C W
Sbjct: 530 DPYCGW 535
>AB037789-1|BAA92606.1| 1049|Homo sapiens KIAA1368 protein protein.
Length = 1049
Score = 61.7 bits (143), Expect = 2e-09
Identities = 30/82 (36%), Positives = 47/82 (57%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S D+ +NF+K HPLMD+AVPS RP +R ++YR + IAV A + V+
Sbjct: 383 SNEFPDDTLNFIKTHPLMDEAVPSIFNRPWFLRTMVRYRLTKIAV--DTAAGPYQNHTVV 440
Query: 201 YIGTDDGRVIKAVNVASNKAFL 266
++G++ G ++K + N FL
Sbjct: 441 FLGSEKGIILKFLARIGNSGFL 462
Score = 31.5 bits (68), Expect = 3.1
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +2
Query: 308 AVISEEQVLPQGVPIKQ---MHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRE-CVSLQ 475
+V + E+ GV K+ M + + L VA + V L C C++ C++ +
Sbjct: 472 SVYNSEKCSYDGVEDKRIMGMQLDRASSSLYVAFSTCVIKVPLGRCERHGKCKKTCIASR 531
Query: 476 DPHCAW 493
DP+C W
Sbjct: 532 DPYCGW 537
>L26081-1|AAA65938.1| 771|Homo sapiens semaphorin-III protein.
Length = 771
Score = 61.3 bits (142), Expect = 3e-09
Identities = 30/77 (38%), Positives = 50/77 (64%)
Frame = +3
Query: 15 EDSRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYD 194
+ ++ L D+V+ F ++HP M V RPI+I+ + Y+F+ I V +V A +G +YD
Sbjct: 390 DSTKDLPDDVITFARSHPAMYNPVFPMNNRPIVIKTDVNYQFTQIVV-DRVDAEDG-QYD 447
Query: 195 VLYIGTDDGRVIKAVNV 245
V++IGTD G V+K V++
Sbjct: 448 VMFIGTDVGTVLKVVSI 464
Score = 36.7 bits (81), Expect = 0.081
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNV-QSCRECVSLQDPHC 487
++ E V + I M ++ ++L + S + + L C ++C EC +DP+C
Sbjct: 476 LLEEMTVFREPTAISAMELSTKQQQLYIGSTAGVAQLPLHRCDIYGKACAECCLARDPYC 535
Query: 488 AWD 496
AWD
Sbjct: 536 AWD 538
>BC111416-1|AAI11417.1| 771|Homo sapiens sema domain,
immunoglobulin domain (Ig), short basic domain,
secreted, (semapho protein.
Length = 771
Score = 61.3 bits (142), Expect = 3e-09
Identities = 30/77 (38%), Positives = 50/77 (64%)
Frame = +3
Query: 15 EDSRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYD 194
+ ++ L D+V+ F ++HP M V RPI+I+ + Y+F+ I V +V A +G +YD
Sbjct: 390 DSTKDLPDDVITFARSHPAMYNPVFPMNNRPIVIKTDVNYQFTQIVV-DRVDAEDG-QYD 447
Query: 195 VLYIGTDDGRVIKAVNV 245
V++IGTD G V+K V++
Sbjct: 448 VMFIGTDVGTVLKVVSI 464
Score = 36.7 bits (81), Expect = 0.081
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNV-QSCRECVSLQDPHC 487
++ E V + I M ++ ++L + S + + L C ++C EC +DP+C
Sbjct: 476 LLEEMTVFREPTAISAMELSTKQQQLYIGSTAGVAQLPLHRCDIYGKACAECCLARDPYC 535
Query: 488 AWD 496
AWD
Sbjct: 536 AWD 538
>AC073221-1|AAP22350.1| 301|Homo sapiens unknown protein.
Length = 301
Score = 61.3 bits (142), Expect = 3e-09
Identities = 30/77 (38%), Positives = 50/77 (64%)
Frame = +3
Query: 15 EDSRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYD 194
+ ++ L D+V+ F ++HP M V RPI+I+ + Y+F+ I V +V A +G +YD
Sbjct: 207 DSTKDLPDDVITFARSHPAMYNPVFPMNNRPIVIKTDVNYQFTQIVV-DRVDAEDG-QYD 264
Query: 195 VLYIGTDDGRVIKAVNV 245
V++IGTD G V+K V++
Sbjct: 265 VMFIGTDVGTVLKVVSI 281
>BC030690-1|AAH30690.1| 751|Homo sapiens sema domain,
immunoglobulin domain (Ig), short basic domain,
secreted, (semapho protein.
Length = 751
Score = 60.9 bits (141), Expect = 4e-09
Identities = 29/80 (36%), Positives = 51/80 (63%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
++ D+VV F++ HPLM ++ RP+++R+ Y+++ IAV +V A +G +Y VL
Sbjct: 390 TKEFPDDVVTFIRNHPLMYNSIYPIHKRPLIVRIGTDYKYTKIAV-DRVNAADG-RYHVL 447
Query: 201 YIGTDDGRVIKAVNVASNKA 260
++GTD G V K V + +N +
Sbjct: 448 FLGTDRGTVQKVVVLPTNNS 467
Score = 44.4 bits (100), Expect = 4e-04
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +2
Query: 287 SKNPVRTAVISEE-QVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNV-QSCRE 460
+ N V +I EE +V PI M ++ ++L V+S + + V+L C +C +
Sbjct: 464 TNNSVSGELILEELEVFKNHAPITTMKISSKKQQLYVSSNEGVSQVSLHRCHIYGTACAD 523
Query: 461 CVSLQDPHCAWD 496
C +DP+CAWD
Sbjct: 524 CCLARDPYCAWD 535
>AB000220-1|BAA32398.1| 751|Homo sapiens semaphorin E protein.
Length = 751
Score = 60.9 bits (141), Expect = 4e-09
Identities = 29/80 (36%), Positives = 51/80 (63%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
++ D+VV F++ HPLM ++ RP+++R+ Y+++ IAV +V A +G +Y VL
Sbjct: 390 TKEFPDDVVTFIRNHPLMYNSIYPIHKRPLIVRIGTDYKYTKIAV-DRVNAADG-RYHVL 447
Query: 201 YIGTDDGRVIKAVNVASNKA 260
++GTD G V K V + +N +
Sbjct: 448 FLGTDRGTVQKVVVLPTNNS 467
Score = 44.4 bits (100), Expect = 4e-04
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +2
Query: 287 SKNPVRTAVISEE-QVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNV-QSCRE 460
+ N V +I EE +V PI M ++ ++L V+S + + V+L C +C +
Sbjct: 464 TNNSVSGELILEELEVFKNHAPITTMKISSKKQQLYVSSNEGVSQVSLHRCHIYGTACAD 523
Query: 461 CVSLQDPHCAWD 496
C +DP+CAWD
Sbjct: 524 CCLARDPYCAWD 535
>BC038411-1|AAH38411.1| 770|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 770
Score = 59.7 bits (138), Expect = 1e-08
Identities = 29/82 (35%), Positives = 49/82 (59%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S +L D V+ F++ HPLMD+ V P+L+ Y + H +V +++G +YDVL
Sbjct: 397 SLSLPDRVLTFIRDHPLMDRPVFPADGHPLLVTTDTAYL--RVVAH-RVTSLSGKEYDVL 453
Query: 201 YIGTDDGRVIKAVNVASNKAFL 266
Y+GT+DG + +AV + + + L
Sbjct: 454 YLGTEDGHLHRAVRIGAQLSVL 475
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/79 (30%), Positives = 40/79 (50%)
Frame = +2
Query: 257 GVFDASVDEYSKNPVRTAVISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 436
G D + + + +V+ + + P+ P++ M L L+V S + V ++C
Sbjct: 456 GTEDGHLHRAVRIGAQLSVLEDLALFPEPQPVENMK--LYHSWLLVGSRTEVTQVNTTNC 513
Query: 437 GNVQSCRECVSLQDPHCAW 493
G +QSC EC+ QDP CAW
Sbjct: 514 GRLQSCSECILAQDPVCAW 532
>BC029590-1|AAH29590.1| 416|Homo sapiens SEMA3D protein protein.
Length = 416
Score = 59.7 bits (138), Expect = 1e-08
Identities = 29/82 (35%), Positives = 51/82 (62%)
Frame = +3
Query: 12 VEDSRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKY 191
++ +R D+V++F+K H +M K+V P R+++ YR + I V V A +G +Y
Sbjct: 46 IKSTRDFPDDVISFIKRHSVMYKSVYPVAGGPTFKRINVDYRLTQIVV-DHVIAEDG-QY 103
Query: 192 DVLYIGTDDGRVIKAVNVASNK 257
DV+++GTD G V+K V+++ K
Sbjct: 104 DVMFLGTDIGTVLKVVSISKEK 125
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNV-QSCRECVSLQDPHC 487
V+ E Q+ I M ++L ++L + S D + ++L C ++C +C +DP+C
Sbjct: 132 VLEELQIFKHSSIILNMELSLKQQQLYIGSRDGLVQLSLHRCDTYGKACADCCLARDPYC 191
Query: 488 AWD 496
AWD
Sbjct: 192 AWD 194
>BC018361-1|AAH18361.1| 615|Homo sapiens SEMA4F protein protein.
Length = 615
Score = 59.7 bits (138), Expect = 1e-08
Identities = 29/82 (35%), Positives = 49/82 (59%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S +L D V+ F++ HPLMD+ V P+L+ Y + H +V +++G +YDVL
Sbjct: 242 SLSLPDRVLTFIRDHPLMDRPVFPADGHPLLVTTDTAYL--RVVAH-RVTSLSGKEYDVL 298
Query: 201 YIGTDDGRVIKAVNVASNKAFL 266
Y+GT+DG + +AV + + + L
Sbjct: 299 YLGTEDGHLHRAVRIGAQLSVL 320
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/79 (30%), Positives = 40/79 (50%)
Frame = +2
Query: 257 GVFDASVDEYSKNPVRTAVISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 436
G D + + + +V+ + + P+ P++ M L L+V S + V ++C
Sbjct: 301 GTEDGHLHRAVRIGAQLSVLEDLALFPEPQPVENMK--LYHSWLLVGSRTEVTQVNTTNC 358
Query: 437 GNVQSCRECVSLQDPHCAW 493
G +QSC EC+ QDP CAW
Sbjct: 359 GRLQSCSECILAQDPVCAW 377
>AY358937-1|AAQ89296.1| 777|Homo sapiens Collapsin-2 protein.
Length = 777
Score = 59.7 bits (138), Expect = 1e-08
Identities = 29/82 (35%), Positives = 51/82 (62%)
Frame = +3
Query: 12 VEDSRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKY 191
++ +R D+V++F+K H +M K+V P R+++ YR + I V V A +G +Y
Sbjct: 407 IKSTRDFPDDVISFIKRHSVMYKSVYPVAGGPTFKRINVDYRLTQIVV-DHVIAEDG-QY 464
Query: 192 DVLYIGTDDGRVIKAVNVASNK 257
DV+++GTD G V+K V+++ K
Sbjct: 465 DVMFLGTDIGTVLKVVSISKEK 486
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNV-QSCRECVSLQDPHC 487
V+ E Q+ I M ++L ++L + S D + ++L C ++C +C +DP+C
Sbjct: 493 VLEELQIFKHSSIILNMELSLKQQQLYIGSRDGLVQLSLHRCDTYGKACADCCLARDPYC 552
Query: 488 AWD 496
AWD
Sbjct: 553 AWD 555
>AK075384-1|BAC11584.1| 770|Homo sapiens protein ( Homo sapiens
cDNA PSEC0074 fis, clone NT2RP2003050, highly similar to
Mus musculus mRNA for semaphorin W. ).
Length = 770
Score = 59.7 bits (138), Expect = 1e-08
Identities = 29/82 (35%), Positives = 49/82 (59%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S +L D V+ F++ HPLMD+ V P+L+ Y + H +V +++G +YDVL
Sbjct: 397 SLSLPDRVLTFIRDHPLMDRPVFPADGHPLLVTTDTAYL--RVVAH-RVTSLSGKEYDVL 453
Query: 201 YIGTDDGRVIKAVNVASNKAFL 266
Y+GT+DG + +AV + + + L
Sbjct: 454 YLGTEDGHLHRAVRIGAQLSVL 475
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/79 (30%), Positives = 40/79 (50%)
Frame = +2
Query: 257 GVFDASVDEYSKNPVRTAVISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 436
G D + + + +V+ + + P+ P++ M L L+V S + V ++C
Sbjct: 456 GTEDGHLHRAVRIGAQLSVLEDLALFPEPQPVENMK--LYHSWLLVGSRTEVTQVNTTNC 513
Query: 437 GNVQSCRECVSLQDPHCAW 493
G +QSC EC+ QDP CAW
Sbjct: 514 GRLQSCSECILAQDPVCAW 532
>AF053369-1|AAF80660.1| 424|Homo sapiens semaphorin M protein.
Length = 424
Score = 59.7 bits (138), Expect = 1e-08
Identities = 29/82 (35%), Positives = 49/82 (59%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S +L D V+ F++ HPLMD+ V P+L+ Y + H +V +++G +YDVL
Sbjct: 51 SLSLPDRVLTFIRDHPLMDRPVFPADGHPLLVTTDTAYL--RVVAH-RVTSLSGKEYDVL 107
Query: 201 YIGTDDGRVIKAVNVASNKAFL 266
Y+GT+DG + +AV + + + L
Sbjct: 108 YLGTEDGHLHRAVRIGAQLSVL 129
Score = 48.8 bits (111), Expect = 2e-05
Identities = 24/79 (30%), Positives = 40/79 (50%)
Frame = +2
Query: 257 GVFDASVDEYSKNPVRTAVISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 436
G D + + + +V+ + + P+ P++ M L L+V S + V ++C
Sbjct: 110 GTEDGHLHRAVRIGAQLSVLEDLALFPEPQPVENMK--LYHSWLLVGSRTEVTQVNTTNC 167
Query: 437 GNVQSCRECVSLQDPHCAW 493
G +QSC EC+ QDP CAW
Sbjct: 168 GRLQSCSECILAQDPVCAW 186
>AC079799-1|AAS07488.1| 591|Homo sapiens unknown protein.
Length = 591
Score = 59.7 bits (138), Expect = 1e-08
Identities = 28/70 (40%), Positives = 47/70 (67%)
Frame = +3
Query: 36 DEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVLYIGTD 215
D+ + F ++HPLM +A+ +PIL++ +Y IAV +V+A +G +YDVL+IGTD
Sbjct: 215 DDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAV-DRVEAEDG-QYDVLFIGTD 272
Query: 216 DGRVIKAVNV 245
+G V+K + +
Sbjct: 273 NGIVLKVITI 282
Score = 48.0 bits (109), Expect = 3e-05
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQS-CRECVSLQDPHC 487
++ E Q+ VPI M ++ ++L + S + V HC S C +C +DP+C
Sbjct: 294 ILEELQIFKDPVPIISMEISSKRQQLYIGSASAVAQVRFHHCDMYGSACADCCLARDPYC 353
Query: 488 AWD 496
AWD
Sbjct: 354 AWD 356
>AB022317-1|BAA75631.1| 615|Homo sapiens semaphorin W protein.
Length = 615
Score = 59.7 bits (138), Expect = 1e-08
Identities = 29/82 (35%), Positives = 49/82 (59%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S +L D V+ F++ HPLMD+ V P+L+ Y + H +V +++G +YDVL
Sbjct: 242 SLSLPDRVLTFIRDHPLMDRPVFPADGHPLLVTTDTAYL--RVVAH-RVTSLSGKEYDVL 298
Query: 201 YIGTDDGRVIKAVNVASNKAFL 266
Y+GT+DG + +AV + + + L
Sbjct: 299 YLGTEDGHLHRAVRIGAQLSVL 320
Score = 49.2 bits (112), Expect = 1e-05
Identities = 24/80 (30%), Positives = 41/80 (51%)
Frame = +2
Query: 257 GVFDASVDEYSKNPVRTAVISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHC 436
G D + + + +V+ + + P+ P++ M L L+V S + V ++C
Sbjct: 301 GTEDGHLHRAVRIGAQLSVLEDLALFPEPQPVENMK--LYHSWLLVGSRTEVTQVNTTNC 358
Query: 437 GNVQSCRECVSLQDPHCAWD 496
G +QSC EC+ QDP CAW+
Sbjct: 359 GRLQSCSECILAQDPVCAWN 378
>AB002329-1|BAA20789.2| 814|Homo sapiens KIAA0331 protein.
Length = 814
Score = 59.7 bits (138), Expect = 1e-08
Identities = 28/70 (40%), Positives = 47/70 (67%)
Frame = +3
Query: 36 DEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVLYIGTD 215
D+ + F ++HPLM +A+ +PIL++ +Y IAV +V+A +G +YDVL+IGTD
Sbjct: 438 DDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAV-DRVEAEDG-QYDVLFIGTD 495
Query: 216 DGRVIKAVNV 245
+G V+K + +
Sbjct: 496 NGIVLKVITI 505
Score = 48.0 bits (109), Expect = 3e-05
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQS-CRECVSLQDPHC 487
++ E Q+ VPI M ++ ++L + S + V HC S C +C +DP+C
Sbjct: 517 ILEELQIFKDPVPIISMEISSKRQQLYIGSASAVAQVRFHHCDMYGSACADCCLARDPYC 576
Query: 488 AWD 496
AWD
Sbjct: 577 AWD 579
>U73167-5|AAC02731.1| 750|Homo sapiens semaphorin V protein.
Length = 750
Score = 58.8 bits (136), Expect = 2e-08
Identities = 30/75 (40%), Positives = 47/75 (62%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
++ D+V+ F + HPLM +V RP+ ++V Y F+ IA +V A +G+ YDVL
Sbjct: 392 TKDFPDDVIQFARNHPLMYNSVLPTGGRPLFLQVGANYTFTQIAA-DRVAAADGH-YDVL 449
Query: 201 YIGTDDGRVIKAVNV 245
+IGTD G V+K ++V
Sbjct: 450 FIGTDVGTVLKVISV 464
Score = 43.6 bits (98), Expect = 7e-04
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 272 SVDEYSKNPVRTAVISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCG-NVQ 448
SV + S+ ++ E V + M ++ +L VAS + + L C + +
Sbjct: 463 SVPKGSRPSAEGLLLEELHVFEDSAAVTSMQISSKRHQLYVASRSAVAQIALHRCAAHGR 522
Query: 449 SCRECVSLQDPHCAWD 496
C EC +DP+CAWD
Sbjct: 523 VCTECCLARDPYCAWD 538
>U28369-1|AAD09138.1| 749|Homo sapiens semaphorin V protein.
Length = 749
Score = 58.8 bits (136), Expect = 2e-08
Identities = 30/75 (40%), Positives = 47/75 (62%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
++ D+V+ F + HPLM +V RP+ ++V Y F+ IA +V A +G+ YDVL
Sbjct: 391 TKDFPDDVIQFARNHPLMYNSVLPTGGRPLFLQVGANYTFTQIAA-DRVAAADGH-YDVL 448
Query: 201 YIGTDDGRVIKAVNV 245
+IGTD G V+K ++V
Sbjct: 449 FIGTDVGTVLKVISV 463
Score = 43.6 bits (98), Expect = 7e-04
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 272 SVDEYSKNPVRTAVISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCG-NVQ 448
SV + S+ ++ E V + M ++ +L VAS + + L C + +
Sbjct: 462 SVPKGSRPSAEGLLLEELHVFEDSAAVTSMQISSKRHQLYVASRSAVAQIALHRCAAHGR 521
Query: 449 SCRECVSLQDPHCAWD 496
C EC +DP+CAWD
Sbjct: 522 VCTECCLARDPYCAWD 537
>BC044602-1|AAH44602.1| 573|Homo sapiens SEMA3B protein protein.
Length = 573
Score = 58.8 bits (136), Expect = 2e-08
Identities = 30/75 (40%), Positives = 47/75 (62%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
++ D+V+ F + HPLM +V RP+ ++V Y F+ IA +V A +G+ YDVL
Sbjct: 215 TKDFPDDVIQFARNHPLMYNSVLPTGGRPLFLQVGANYTFTQIAA-DRVAAADGH-YDVL 272
Query: 201 YIGTDDGRVIKAVNV 245
+IGTD G V+K ++V
Sbjct: 273 FIGTDVGTVLKVISV 287
Score = 43.6 bits (98), Expect = 7e-04
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 272 SVDEYSKNPVRTAVISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCG-NVQ 448
SV + S+ ++ E V + M ++ +L VAS + + L C + +
Sbjct: 286 SVPKGSRPSAEGLLLEELHVFEDSAAVTSMQISSKRHQLYVASRSAVAQIALHRCAAHGR 345
Query: 449 SCRECVSLQDPHCAWD 496
C EC +DP+CAWD
Sbjct: 346 VCTECCLARDPYCAWD 361
>BC024220-1|AAH24220.1| 748|Homo sapiens sema domain,
immunoglobulin domain (Ig), short basic domain,
secreted, (semapho protein.
Length = 748
Score = 58.8 bits (136), Expect = 2e-08
Identities = 30/75 (40%), Positives = 47/75 (62%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
++ D+V+ F + HPLM +V RP+ ++V Y F+ IA +V A +G+ YDVL
Sbjct: 390 TKDFPDDVIQFARNHPLMYNSVLPTGGRPLFLQVGANYTFTQIAA-DRVAAADGH-YDVL 447
Query: 201 YIGTDDGRVIKAVNV 245
+IGTD G V+K ++V
Sbjct: 448 FIGTDVGTVLKVISV 462
Score = 43.6 bits (98), Expect = 7e-04
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 272 SVDEYSKNPVRTAVISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCG-NVQ 448
SV + S+ ++ E V + M ++ +L VAS + + L C + +
Sbjct: 461 SVPKGSRPSAEGLLLEELHVFEDSAAVTSMQISSKRHQLYVASRSAVAQIALHRCAAHGR 520
Query: 449 SCRECVSLQDPHCAWD 496
C EC +DP+CAWD
Sbjct: 521 VCTECCLARDPYCAWD 536
>BC013975-1|AAH13975.1| 748|Homo sapiens sema domain,
immunoglobulin domain (Ig), short basic domain,
secreted, (semapho protein.
Length = 748
Score = 58.8 bits (136), Expect = 2e-08
Identities = 30/75 (40%), Positives = 47/75 (62%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
++ D+V+ F + HPLM +V RP+ ++V Y F+ IA +V A +G+ YDVL
Sbjct: 390 TKDFPDDVIQFARNHPLMYNSVLPTGGRPLFLQVGANYTFTQIAA-DRVAAADGH-YDVL 447
Query: 201 YIGTDDGRVIKAVNV 245
+IGTD G V+K ++V
Sbjct: 448 FIGTDVGTVLKVISV 462
Score = 43.6 bits (98), Expect = 7e-04
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 272 SVDEYSKNPVRTAVISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCG-NVQ 448
SV + S+ ++ E V + M ++ +L VAS + + L C + +
Sbjct: 461 SVPKGSRPSAEGLLLEELHVFEDSAAVTSMQISSKRHQLYVASRSAVAQIALHRCAAHGR 520
Query: 449 SCRECVSLQDPHCAWD 496
C EC +DP+CAWD
Sbjct: 521 VCTECCLARDPYCAWD 536
>BC009113-1|AAH09113.1| 635|Homo sapiens SEMA3B protein protein.
Length = 635
Score = 58.8 bits (136), Expect = 2e-08
Identities = 30/75 (40%), Positives = 47/75 (62%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
++ D+V+ F + HPLM +V RP+ ++V Y F+ IA +V A +G+ YDVL
Sbjct: 277 TKDFPDDVIQFARNHPLMYNSVLPTGGRPLFLQVGANYTFTQIAA-DRVAAADGH-YDVL 334
Query: 201 YIGTDDGRVIKAVNV 245
+IGTD G V+K ++V
Sbjct: 335 FIGTDVGTVLKVISV 349
Score = 43.6 bits (98), Expect = 7e-04
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 272 SVDEYSKNPVRTAVISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCG-NVQ 448
SV + S+ ++ E V + M ++ +L VAS + + L C + +
Sbjct: 348 SVPKGSRPSAEGLLLEELHVFEDSAAVTSMQISSKRHQLYVASRSAVAQIALHRCAAHGR 407
Query: 449 SCRECVSLQDPHCAWD 496
C EC +DP+CAWD
Sbjct: 408 VCTECCLARDPYCAWD 423
>AB209322-1|BAD92559.1| 498|Homo sapiens semaphorin 3B isoform 2
precursor variant protein.
Length = 498
Score = 58.8 bits (136), Expect = 2e-08
Identities = 30/75 (40%), Positives = 47/75 (62%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
++ D+V+ F + HPLM +V RP+ ++V Y F+ IA +V A +G+ YDVL
Sbjct: 140 TKDFPDDVIQFARNHPLMYNSVLPTGGRPLFLQVGANYTFTQIAA-DRVAAADGH-YDVL 197
Query: 201 YIGTDDGRVIKAVNV 245
+IGTD G V+K ++V
Sbjct: 198 FIGTDVGTVLKVISV 212
Score = 43.6 bits (98), Expect = 7e-04
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 272 SVDEYSKNPVRTAVISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCG-NVQ 448
SV + S+ ++ E V + M ++ +L VAS + + L C + +
Sbjct: 211 SVPKGSRPSAEGLLLEELHVFEDSAAVTSMQISSKRHQLYVASRSAVAQIALHRCAAHGR 270
Query: 449 SCRECVSLQDPHCAWD 496
C EC +DP+CAWD
Sbjct: 271 VCTECCLARDPYCAWD 286
>AB083186-1|BAB88870.1| 754|Homo sapiens semaphorin 3B protein.
Length = 754
Score = 58.8 bits (136), Expect = 2e-08
Identities = 30/75 (40%), Positives = 47/75 (62%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
++ D+V+ F + HPLM +V RP+ ++V Y F+ IA +V A +G+ YDVL
Sbjct: 396 TKDFPDDVIQFARNHPLMYNSVLPTGGRPLFLQVGANYTFTQIAA-DRVAAADGH-YDVL 453
Query: 201 YIGTDDGRVIKAVNV 245
+IGTD G V+K ++V
Sbjct: 454 FIGTDVGTVLKVISV 468
Score = 43.6 bits (98), Expect = 7e-04
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 272 SVDEYSKNPVRTAVISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCG-NVQ 448
SV + S+ ++ E V + M ++ +L VAS + + L C + +
Sbjct: 467 SVPKGSRPSAEGLLLEELHVFEDSAAVTSMQISSKRHQLYVASRSAVAQIALHRCAAHGR 526
Query: 449 SCRECVSLQDPHCAWD 496
C EC +DP+CAWD
Sbjct: 527 VCTECCLARDPYCAWD 542
>BC109104-1|AAI09105.1| 833|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 833
Score = 56.8 bits (131), Expect = 7e-08
Identities = 29/75 (38%), Positives = 46/75 (61%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S L D ++NFVK HPLM++ V +RP+L++ + V +V ++G Y VL
Sbjct: 383 SLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTH---LVADRVTGLDGATYTVL 439
Query: 201 YIGTDDGRVIKAVNV 245
+IGT DG ++KAV++
Sbjct: 440 FIGTGDGWLLKAVSL 454
Score = 38.3 bits (85), Expect = 0.027
Identities = 17/61 (27%), Positives = 34/61 (55%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCA 490
+I E Q+ Q P++ + ++ + + L S + + ++ C +SC +CV +DP+CA
Sbjct: 460 LIEELQLFDQE-PMRSLVLSQSKKLLFAGSRSQLVQLPVADCMKYRSCADCVLARDPYCA 518
Query: 491 W 493
W
Sbjct: 519 W 519
>BC109103-1|AAI09104.1| 833|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 833
Score = 56.8 bits (131), Expect = 7e-08
Identities = 29/75 (38%), Positives = 46/75 (61%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S L D ++NFVK HPLM++ V +RP+L++ + V +V ++G Y VL
Sbjct: 383 SLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTH---LVADRVTGLDGATYTVL 439
Query: 201 YIGTDDGRVIKAVNV 245
+IGT DG ++KAV++
Sbjct: 440 FIGTGDGWLLKAVSL 454
Score = 38.3 bits (85), Expect = 0.027
Identities = 17/61 (27%), Positives = 34/61 (55%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCA 490
+I E Q+ Q P++ + ++ + + L S + + ++ C +SC +CV +DP+CA
Sbjct: 460 LIEELQLFDQE-PMRSLVLSQSKKLLFAGSRSQLVQLPVADCMKYRSCADCVLARDPYCA 518
Query: 491 W 493
W
Sbjct: 519 W 519
>BC062984-1|AAH62984.1| 543|Homo sapiens SEMA4C protein protein.
Length = 543
Score = 56.8 bits (131), Expect = 7e-08
Identities = 29/75 (38%), Positives = 46/75 (61%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S L D ++NFVK HPLM++ V +RP+L++ + V +V ++G Y VL
Sbjct: 93 SLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTH---LVADRVTGLDGATYTVL 149
Query: 201 YIGTDDGRVIKAVNV 245
+IGT DG ++KAV++
Sbjct: 150 FIGTGDGWLLKAVSL 164
Score = 38.3 bits (85), Expect = 0.027
Identities = 17/61 (27%), Positives = 34/61 (55%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCA 490
+I E Q+ Q P++ + ++ + + L S + + ++ C +SC +CV +DP+CA
Sbjct: 170 LIEELQLFDQE-PMRSLVLSQSKKLLFAGSRSQLVQLPVADCMKYRSCADCVLARDPYCA 228
Query: 491 W 493
W
Sbjct: 229 W 229
>BC017476-1|AAH17476.2| 645|Homo sapiens SEMA4C protein protein.
Length = 645
Score = 56.8 bits (131), Expect = 7e-08
Identities = 29/75 (38%), Positives = 46/75 (61%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S L D ++NFVK HPLM++ V +RP+L++ + V +V ++G Y VL
Sbjct: 195 SLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTH---LVADRVTGLDGATYTVL 251
Query: 201 YIGTDDGRVIKAVNV 245
+IGT DG ++KAV++
Sbjct: 252 FIGTGDGWLLKAVSL 266
Score = 38.3 bits (85), Expect = 0.027
Identities = 17/61 (27%), Positives = 34/61 (55%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCA 490
+I E Q+ Q P++ + ++ + + L S + + ++ C +SC +CV +DP+CA
Sbjct: 272 LIEELQLFDQE-PMRSLVLSQSKKLLFAGSRSQLVQLPVADCMKYRSCADCVLARDPYCA 330
Query: 491 W 493
W
Sbjct: 331 W 331
>AY358842-1|AAQ89201.1| 833|Homo sapiens SEMA4C protein.
Length = 833
Score = 56.8 bits (131), Expect = 7e-08
Identities = 29/75 (38%), Positives = 46/75 (61%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S L D ++NFVK HPLM++ V +RP+L++ + V +V ++G Y VL
Sbjct: 383 SLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTH---LVADRVTGLDGATYTVL 439
Query: 201 YIGTDDGRVIKAVNV 245
+IGT DG ++KAV++
Sbjct: 440 FIGTGDGWLLKAVSL 454
Score = 38.3 bits (85), Expect = 0.027
Identities = 17/61 (27%), Positives = 34/61 (55%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCA 490
+I E Q+ Q P++ + ++ + + L S + + ++ C +SC +CV +DP+CA
Sbjct: 460 LIEELQLFDQE-PMRSLVLSQSKKLLFAGSRSQLVQLPVADCMKYRSCADCVLARDPYCA 518
Query: 491 W 493
W
Sbjct: 519 W 519
>AC092636-5|AAY14967.1| 510|Homo sapiens unknown protein.
Length = 510
Score = 56.8 bits (131), Expect = 7e-08
Identities = 29/75 (38%), Positives = 46/75 (61%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S L D ++NFVK HPLM++ V +RP+L++ + V +V ++G Y VL
Sbjct: 60 SLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTH---LVADRVTGLDGATYTVL 116
Query: 201 YIGTDDGRVIKAVNV 245
+IGT DG ++KAV++
Sbjct: 117 FIGTGDGWLLKAVSL 131
Score = 38.3 bits (85), Expect = 0.027
Identities = 17/61 (27%), Positives = 34/61 (55%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCA 490
+I E Q+ Q P++ + ++ + + L S + + ++ C +SC +CV +DP+CA
Sbjct: 137 LIEELQLFDQE-PMRSLVLSQSKKLLFAGSRSQLVQLPVADCMKYRSCADCVLARDPYCA 195
Query: 491 W 493
W
Sbjct: 196 W 196
>AB051526-1|BAB21830.1| 963|Homo sapiens KIAA1739 protein protein.
Length = 963
Score = 56.8 bits (131), Expect = 7e-08
Identities = 29/75 (38%), Positives = 46/75 (61%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S L D ++NFVK HPLM++ V +RP+L++ + V +V ++G Y VL
Sbjct: 513 SLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTH---LVADRVTGLDGATYTVL 569
Query: 201 YIGTDDGRVIKAVNV 245
+IGT DG ++KAV++
Sbjct: 570 FIGTGDGWLLKAVSL 584
Score = 38.3 bits (85), Expect = 0.027
Identities = 17/61 (27%), Positives = 34/61 (55%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCA 490
+I E Q+ Q P++ + ++ + + L S + + ++ C +SC +CV +DP+CA
Sbjct: 590 LIEELQLFDQE-PMRSLVLSQSKKLLFAGSRSQLVQLPVADCMKYRSCADCVLARDPYCA 648
Query: 491 W 493
W
Sbjct: 649 W 649
>U60800-1|AAC50810.1| 862|Homo sapiens semaphorin protein.
Length = 862
Score = 55.6 bits (128), Expect = 2e-07
Identities = 30/75 (40%), Positives = 46/75 (61%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S L D+ + FVK HPLMD +V RP LI+ + Y + I V + QA++G YDV+
Sbjct: 383 SLNLPDKTLQFVKDHPLMDDSVTPIDNRPRLIKKDVNY--TQIVV-DRTQALDGTVYDVM 439
Query: 201 YIGTDDGRVIKAVNV 245
++ TD G + KA+++
Sbjct: 440 FVSTDRGALHKAISL 454
Score = 37.5 bits (83), Expect = 0.047
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGD---IIKAVTLSHCGNVQSCRECVSLQDP 481
+I E Q+ P++ + ++ V +G +++A L+ CG +C +CV +DP
Sbjct: 460 IIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA-PLAFCGKHGTCEDCVLARDP 518
Query: 482 HCAW 493
+CAW
Sbjct: 519 YCAW 522
>BC054500-1|AAH54500.1| 862|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 862
Score = 55.6 bits (128), Expect = 2e-07
Identities = 30/75 (40%), Positives = 46/75 (61%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S L D+ + FVK HPLMD +V RP LI+ + Y + I V + QA++G YDV+
Sbjct: 383 SLNLPDKTLQFVKDHPLMDDSVTPIDNRPRLIKKDVNY--TQIVV-DRTQALDGTVYDVM 439
Query: 201 YIGTDDGRVIKAVNV 245
++ TD G + KA+++
Sbjct: 440 FVSTDRGALHKAISL 454
Score = 37.5 bits (83), Expect = 0.047
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGD---IIKAVTLSHCGNVQSCRECVSLQDP 481
+I E Q+ P++ + ++ V +G +++A L+ CG +C +CV +DP
Sbjct: 460 IIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA-PLAFCGKHGTCEDCVLARDP 518
Query: 482 HCAW 493
+CAW
Sbjct: 519 YCAW 522
>AL929575-4|CAI43250.2| 862|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 862
Score = 55.6 bits (128), Expect = 2e-07
Identities = 30/75 (40%), Positives = 46/75 (61%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S L D+ + FVK HPLMD +V RP LI+ + Y + I V + QA++G YDV+
Sbjct: 383 SLNLPDKTLQFVKDHPLMDDSVTPIDNRPRLIKKDVNY--TQIVV-DRTQALDGTVYDVM 439
Query: 201 YIGTDDGRVIKAVNV 245
++ TD G + KA+++
Sbjct: 440 FVSTDRGALHKAISL 454
Score = 37.5 bits (83), Expect = 0.047
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGD---IIKAVTLSHCGNVQSCRECVSLQDP 481
+I E Q+ P++ + ++ V +G +++A L+ CG +C +CV +DP
Sbjct: 460 IIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA-PLAFCGKHGTCEDCVLARDP 518
Query: 482 HCAW 493
+CAW
Sbjct: 519 YCAW 522
>AL590233-3|CAI17379.2| 862|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 862
Score = 55.6 bits (128), Expect = 2e-07
Identities = 30/75 (40%), Positives = 46/75 (61%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S L D+ + FVK HPLMD +V RP LI+ + Y + I V + QA++G YDV+
Sbjct: 383 SLNLPDKTLQFVKDHPLMDDSVTPIDNRPRLIKKDVNY--TQIVV-DRTQALDGTVYDVM 439
Query: 201 YIGTDDGRVIKAVNV 245
++ TD G + KA+++
Sbjct: 440 FVSTDRGALHKAISL 454
Score = 37.5 bits (83), Expect = 0.047
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGD---IIKAVTLSHCGNVQSCRECVSLQDP 481
+I E Q+ P++ + ++ V +G +++A L+ CG +C +CV +DP
Sbjct: 460 IIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA-PLAFCGKHGTCEDCVLARDP 518
Query: 482 HCAW 493
+CAW
Sbjct: 519 YCAW 522
>AB210030-1|BAE06112.1| 870|Homo sapiens SEMA4D variant protein
protein.
Length = 870
Score = 55.6 bits (128), Expect = 2e-07
Identities = 30/75 (40%), Positives = 46/75 (61%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S L D+ + FVK HPLMD +V RP LI+ + Y + I V + QA++G YDV+
Sbjct: 391 SLNLPDKTLQFVKDHPLMDDSVTPIDNRPRLIKKDVNY--TQIVV-DRTQALDGTVYDVM 447
Query: 201 YIGTDDGRVIKAVNV 245
++ TD G + KA+++
Sbjct: 448 FVSTDRGALHKAISL 462
Score = 37.5 bits (83), Expect = 0.047
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGD---IIKAVTLSHCGNVQSCRECVSLQDP 481
+I E Q+ P++ + ++ V +G +++A L+ CG +C +CV +DP
Sbjct: 468 IIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA-PLAFCGKHGTCEDCVLARDP 526
Query: 482 HCAW 493
+CAW
Sbjct: 527 YCAW 530
>BC142617-1|AAI42618.1| 888|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6B
protein.
Length = 888
Score = 55.2 bits (127), Expect = 2e-07
Identities = 27/71 (38%), Positives = 45/71 (63%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S L D+++NFVK HPLMD+AVPS P ++R ++++ + +AV V A V+
Sbjct: 388 SSALPDDILNFVKTHPLMDEAVPSLGHAPWILRTLMRHQLTRVAV--DVGAGPWGNQTVV 445
Query: 201 YIGTDDGRVIK 233
++G++ G V+K
Sbjct: 446 FLGSEAGTVLK 456
Score = 29.9 bits (64), Expect = 9.3
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +2
Query: 386 LIVASGDIIKAVTLSHCGNVQSC-RECVSLQDPHCAW 493
L+ A + V ++ C C + C+ QDP+C W
Sbjct: 510 LLAAFPRCVVRVPVARCQQYSGCMKNCIGSQDPYCGW 546
>AY358939-1|AAQ89298.1| 888|Homo sapiens semaphorin Z protein.
Length = 888
Score = 55.2 bits (127), Expect = 2e-07
Identities = 27/71 (38%), Positives = 45/71 (63%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S L D+++NFVK HPLMD+AVPS P ++R ++++ + +AV V A V+
Sbjct: 388 SSALPDDILNFVKTHPLMDEAVPSLGHAPWILRTLMRHQLTRVAV--DVGAGPWGNQTVV 445
Query: 201 YIGTDDGRVIK 233
++G++ G V+K
Sbjct: 446 FLGSEAGTVLK 456
Score = 29.9 bits (64), Expect = 9.3
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +2
Query: 386 LIVASGDIIKAVTLSHCGNVQSC-RECVSLQDPHCAW 493
L+ A + V ++ C C + C+ QDP+C W
Sbjct: 510 LLAAFPRCVVRVPVARCQQYSGCMKNCIGSQDPYCGW 546
>AF293363-1|AAK16831.1| 687|Homo sapiens semaphorin 6B isoform 2
protein.
Length = 687
Score = 55.2 bits (127), Expect = 2e-07
Identities = 27/71 (38%), Positives = 45/71 (63%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S L D+++NFVK HPLMD+AVPS P ++R ++++ + +AV V A V+
Sbjct: 388 SSALPDDILNFVKTHPLMDEAVPSLGHAPWILRTLMRHQLTRVAV--DVGAGPWGNQTVV 445
Query: 201 YIGTDDGRVIK 233
++G++ G V+K
Sbjct: 446 FLGSEAGTVLK 456
Score = 29.9 bits (64), Expect = 9.3
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +2
Query: 386 LIVASGDIIKAVTLSHCGNVQSC-RECVSLQDPHCAW 493
L+ A + V ++ C C + C+ QDP+C W
Sbjct: 515 LLAAFPRCVVRVPVARCQQYSGCMKNCIGSQDPYCGW 551
>AF216389-1|AAF87661.1| 517|Homo sapiens semaphorin 6B isoform 1
protein.
Length = 517
Score = 55.2 bits (127), Expect = 2e-07
Identities = 27/71 (38%), Positives = 45/71 (63%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S L D+++NFVK HPLMD+AVPS P ++R ++++ + +AV V A V+
Sbjct: 388 SSALPDDILNFVKTHPLMDEAVPSLGHAPWILRTLMRHQLTRVAV--DVGAGPWGNQTVV 445
Query: 201 YIGTDDGRVIK 233
++G++ G V+K
Sbjct: 446 FLGSEAGTVLK 456
>AB209278-1|BAD92515.1| 518|Homo sapiens semaphorin 6B isoform 3
precursor variant protein.
Length = 518
Score = 55.2 bits (127), Expect = 2e-07
Identities = 27/71 (38%), Positives = 45/71 (63%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S L D+++NFVK HPLMD+AVPS P ++R ++++ + +AV V A V+
Sbjct: 18 SSALPDDILNFVKTHPLMDEAVPSLGHAPWILRTLMRHQLTRVAV--DVGAGPWGNQTVV 75
Query: 201 YIGTDDGRVIK 233
++G++ G V+K
Sbjct: 76 FLGSEAGTVLK 86
Score = 29.9 bits (64), Expect = 9.3
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +2
Query: 386 LIVASGDIIKAVTLSHCGNVQSC-RECVSLQDPHCAW 493
L+ A + V ++ C C + C+ QDP+C W
Sbjct: 140 LLAAFPRCVVRVPVARCQQYSGCMKNCIGSQDPYCGW 176
>AB022433-1|BAB20669.1| 888|Homo sapiens semaphorin Z protein.
Length = 888
Score = 55.2 bits (127), Expect = 2e-07
Identities = 27/71 (38%), Positives = 45/71 (63%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S L D+++NFVK HPLMD+AVPS P ++R ++++ + +AV V A V+
Sbjct: 388 SSALPDDILNFVKTHPLMDEAVPSLGHAPWILRTLMRHQLTRVAV--DVGAGPWGNQTVV 445
Query: 201 YIGTDDGRVIK 233
++G++ G V+K
Sbjct: 446 FLGSEAGTVLK 456
Score = 29.9 bits (64), Expect = 9.3
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +2
Query: 386 LIVASGDIIKAVTLSHCGNVQSC-RECVSLQDPHCAW 493
L+ A + V ++ C C + C+ QDP+C W
Sbjct: 510 LLAAFPRCVVRVPVARCQQYSGCMKNCIGSQDPYCGW 546
>BC099724-1|AAH99724.1| 782|Homo sapiens sema domain,
immunoglobulin domain (Ig), short basic domain,
secreted, (semapho protein.
Length = 782
Score = 54.4 bits (125), Expect = 4e-07
Identities = 28/68 (41%), Positives = 42/68 (61%)
Frame = +3
Query: 36 DEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVLYIGTD 215
DEV+ F +AHPLM V RP+L++ L + I V +V+A +G YDV+++GTD
Sbjct: 402 DEVLQFARAHPLMFWPVRPRHGRPVLVKTHLAQQLHQIVV-DRVEAEDGT-YDVIFLGTD 459
Query: 216 DGRVIKAV 239
G V+K +
Sbjct: 460 SGSVLKVI 467
Score = 43.2 bits (97), Expect = 0.001
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNV-QSCRECVSLQDPHC 487
V+ E QV PI +M +++ + L V S + + L C +C EC +DP+C
Sbjct: 481 VLEELQVFKVPTPITEMEISVKRQMLYVGSRLGVAQLRLHQCETYGTACAECCLARDPYC 540
Query: 488 AWD 496
AWD
Sbjct: 541 AWD 543
>BC098137-1|AAH98137.1| 782|Homo sapiens sema domain,
immunoglobulin domain (Ig), short basic domain,
secreted, (semapho protein.
Length = 782
Score = 54.4 bits (125), Expect = 4e-07
Identities = 28/68 (41%), Positives = 42/68 (61%)
Frame = +3
Query: 36 DEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVLYIGTD 215
DEV+ F +AHPLM V RP+L++ L + I V +V+A +G YDV+++GTD
Sbjct: 402 DEVLQFARAHPLMFWPVRPRHGRPVLVKTHLAQQLHQIVV-DRVEAEDGT-YDVIFLGTD 459
Query: 216 DGRVIKAV 239
G V+K +
Sbjct: 460 SGSVLKVI 467
Score = 43.2 bits (97), Expect = 0.001
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNV-QSCRECVSLQDPHC 487
V+ E QV PI +M +++ + L V S + + L C +C EC +DP+C
Sbjct: 481 VLEELQVFKVPTPITEMEISVKRQMLYVGSRLGVAQLRLHQCETYGTACAECCLARDPYC 540
Query: 488 AWD 496
AWD
Sbjct: 541 AWD 543
>BC098104-1|AAH98104.1| 782|Homo sapiens semaphorin sem2 protein.
Length = 782
Score = 54.4 bits (125), Expect = 4e-07
Identities = 28/68 (41%), Positives = 42/68 (61%)
Frame = +3
Query: 36 DEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVLYIGTD 215
DEV+ F +AHPLM V RP+L++ L + I V +V+A +G YDV+++GTD
Sbjct: 402 DEVLQFARAHPLMFWPVRPRHGRPVLVKTHLAQQLHQIVV-DRVEAEDGT-YDVIFLGTD 459
Query: 216 DGRVIKAV 239
G V+K +
Sbjct: 460 SGSVLKVI 467
Score = 43.2 bits (97), Expect = 0.001
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNV-QSCRECVSLQDPHC 487
V+ E QV PI +M +++ + L V S + + L C +C EC +DP+C
Sbjct: 481 VLEELQVFKVPTPITEMEISVKRQMLYVGSRLGVAQLRLHQCETYGTACAECCLARDPYC 540
Query: 488 AWD 496
AWD
Sbjct: 541 AWD 543
>AK024425-1|BAB15715.1| 725|Homo sapiens FLJ00014 protein protein.
Length = 725
Score = 54.4 bits (125), Expect = 4e-07
Identities = 28/68 (41%), Positives = 42/68 (61%)
Frame = +3
Query: 36 DEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVLYIGTD 215
DEV+ F +AHPLM V RP+L++ L + I V +V+A +G YDV+++GTD
Sbjct: 345 DEVLQFARAHPLMFWPVRPRHGRPVLVKTHLAQQLHQIVV-DRVEAEDGT-YDVIFLGTD 402
Query: 216 DGRVIKAV 239
G V+K +
Sbjct: 403 SGSVLKVI 410
Score = 43.2 bits (97), Expect = 0.001
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNV-QSCRECVSLQDPHC 487
V+ E QV PI +M +++ + L V S + + L C +C EC +DP+C
Sbjct: 424 VLEELQVFKVPTPITEMEISVKRQMLYVGSRLGVAQLRLHQCETYGTACAECCLARDPYC 483
Query: 488 AWD 496
AWD
Sbjct: 484 AWD 486
>AB029496-1|BAA98132.1| 782|Homo sapiens semaphorin sem2 protein.
Length = 782
Score = 54.4 bits (125), Expect = 4e-07
Identities = 28/68 (41%), Positives = 42/68 (61%)
Frame = +3
Query: 36 DEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVLYIGTD 215
DEV+ F +AHPLM V RP+L++ L + I V +V+A +G YDV+++GTD
Sbjct: 402 DEVLQFARAHPLMFWPVRPRHGRPVLVKTHLAQQLHQIVV-DRVEAEDGT-YDVIFLGTD 459
Query: 216 DGRVIKAV 239
G V+K +
Sbjct: 460 SGSVLKVI 467
Score = 43.2 bits (97), Expect = 0.001
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNV-QSCRECVSLQDPHC 487
V+ E QV PI +M +++ + L V S + + L C +C EC +DP+C
Sbjct: 481 VLEELQVFKVPTPITEMEISVKRQMLYVGSRLGVAQLRLHQCETYGTACAECCLARDPYC 540
Query: 488 AWD 496
AWD
Sbjct: 541 AWD 543
>AK000376-1|BAA91124.1| 510|Homo sapiens protein ( Homo sapiens
cDNA FLJ20369 fis, clone HEP19364. ).
Length = 510
Score = 54.0 bits (124), Expect = 5e-07
Identities = 28/75 (37%), Positives = 45/75 (60%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S L D ++NFVK HPLM++ V +RP+L++ + V +V ++G Y VL
Sbjct: 60 SLELPDNILNFVKKHPLMEEQVGPRWSRPLLVKKGTNFTH---LVADRVTGLDGATYTVL 116
Query: 201 YIGTDDGRVIKAVNV 245
+I T DG ++KAV++
Sbjct: 117 FIDTGDGWLLKAVSL 131
Score = 38.3 bits (85), Expect = 0.027
Identities = 17/61 (27%), Positives = 34/61 (55%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCA 490
+I E Q+ Q P++ + ++ + + L S + + ++ C +SC +CV +DP+CA
Sbjct: 137 LIEELQLFDQE-PMRSLVLSQSKKLLFAGSRSQLVQLPVADCMKYRSCADCVLARDPYCA 195
Query: 491 W 493
W
Sbjct: 196 W 196
>BC150253-1|AAI50254.1| 1011|Homo sapiens SEMA6D protein protein.
Length = 1011
Score = 53.6 bits (123), Expect = 7e-07
Identities = 25/68 (36%), Positives = 41/68 (60%)
Frame = +3
Query: 36 DEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVLYIGTD 215
DE ++F+K+HPLMD AVP P + ++YR +AI+V A Y V+++G++
Sbjct: 387 DETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYRLTAISV--DHSAGPYQNYTVIFVGSE 444
Query: 216 DGRVIKAV 239
G V+K +
Sbjct: 445 AGMVLKVL 452
Score = 34.3 bits (75), Expect = 0.43
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 386 LIVASGDIIKAVTLSHCGNVQSCRE-CVSLQDPHCAWDSK 502
L VA I + LS C SC++ C++ +DP+C W S+
Sbjct: 499 LYVAFSSCIIRIPLSRCERYGSCKKSCIASRDPYCGWLSQ 538
>AK021660-1|BAB13869.1| 367|Homo sapiens protein ( Homo sapiens
cDNA FLJ11598 fis, clone HEMBA1003866, moderately
similar to Mus musculus semaphorin VIa mRNA. ).
Length = 367
Score = 53.6 bits (123), Expect = 7e-07
Identities = 25/68 (36%), Positives = 41/68 (60%)
Frame = +3
Query: 36 DEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVLYIGTD 215
DE ++F+K+HPLMD AVP P + ++YR +AI+V A Y V+++G++
Sbjct: 278 DETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYRLTAISV--DHSAGPYQNYTVIFVGSE 335
Query: 216 DGRVIKAV 239
G V+K +
Sbjct: 336 AGMVLKVL 343
>AF389430-1|AAM69453.1| 1011|Homo sapiens semaphorin 6D isoform 1
protein.
Length = 1011
Score = 53.6 bits (123), Expect = 7e-07
Identities = 25/68 (36%), Positives = 41/68 (60%)
Frame = +3
Query: 36 DEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVLYIGTD 215
DE ++F+K+HPLMD AVP P + ++YR +AI+V A Y V+++G++
Sbjct: 387 DETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYRLTAISV--DHSAGPYQNYTVIFVGSE 444
Query: 216 DGRVIKAV 239
G V+K +
Sbjct: 445 AGMVLKVL 452
Score = 34.3 bits (75), Expect = 0.43
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 386 LIVASGDIIKAVTLSHCGNVQSCRE-CVSLQDPHCAWDSK 502
L VA I + LS C SC++ C++ +DP+C W S+
Sbjct: 499 LYVAFSSCIIRIPLSRCERYGSCKKSCIASRDPYCGWLSQ 538
>AF389429-1|AAM69452.1| 1073|Homo sapiens semaphorin 6D isoform 4
protein.
Length = 1073
Score = 53.6 bits (123), Expect = 7e-07
Identities = 25/68 (36%), Positives = 41/68 (60%)
Frame = +3
Query: 36 DEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVLYIGTD 215
DE ++F+K+HPLMD AVP P + ++YR +AI+V A Y V+++G++
Sbjct: 387 DETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYRLTAISV--DHSAGPYQNYTVIFVGSE 444
Query: 216 DGRVIKAV 239
G V+K +
Sbjct: 445 AGMVLKVL 452
Score = 34.3 bits (75), Expect = 0.43
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 386 LIVASGDIIKAVTLSHCGNVQSCRE-CVSLQDPHCAWDSK 502
L VA I + LS C SC++ C++ +DP+C W S+
Sbjct: 499 LYVAFSSCIIRIPLSRCERYGSCKKSCIASRDPYCGWLSQ 538
>AF389428-1|AAM69451.1| 1017|Homo sapiens semaphorin 6D isoform 3
protein.
Length = 1017
Score = 53.6 bits (123), Expect = 7e-07
Identities = 25/68 (36%), Positives = 41/68 (60%)
Frame = +3
Query: 36 DEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVLYIGTD 215
DE ++F+K+HPLMD AVP P + ++YR +AI+V A Y V+++G++
Sbjct: 387 DETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYRLTAISV--DHSAGPYQNYTVIFVGSE 444
Query: 216 DGRVIKAV 239
G V+K +
Sbjct: 445 AGMVLKVL 452
Score = 34.3 bits (75), Expect = 0.43
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 386 LIVASGDIIKAVTLSHCGNVQSCRE-CVSLQDPHCAWDSK 502
L VA I + LS C SC++ C++ +DP+C W S+
Sbjct: 499 LYVAFSSCIIRIPLSRCERYGSCKKSCIASRDPYCGWLSQ 538
>AF389427-1|AAM69450.1| 998|Homo sapiens semaphorin 6D isoform 2
protein.
Length = 998
Score = 53.6 bits (123), Expect = 7e-07
Identities = 25/68 (36%), Positives = 41/68 (60%)
Frame = +3
Query: 36 DEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVLYIGTD 215
DE ++F+K+HPLMD AVP P + ++YR +AI+V A Y V+++G++
Sbjct: 387 DETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYRLTAISV--DHSAGPYQNYTVIFVGSE 444
Query: 216 DGRVIKAV 239
G V+K +
Sbjct: 445 AGMVLKVL 452
Score = 34.3 bits (75), Expect = 0.43
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 386 LIVASGDIIKAVTLSHCGNVQSCRE-CVSLQDPHCAWDSK 502
L VA I + LS C SC++ C++ +DP+C W S+
Sbjct: 499 LYVAFSSCIIRIPLSRCERYGSCKKSCIASRDPYCGWLSQ 538
>AF389426-1|AAM69449.1| 476|Homo sapiens semaphorin 6D short
isoform protein.
Length = 476
Score = 53.6 bits (123), Expect = 7e-07
Identities = 25/68 (36%), Positives = 41/68 (60%)
Frame = +3
Query: 36 DEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVLYIGTD 215
DE ++F+K+HPLMD AVP P + ++YR +AI+V A Y V+++G++
Sbjct: 387 DETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYRLTAISV--DHSAGPYQNYTVIFVGSE 444
Query: 216 DGRVIKAV 239
G V+K +
Sbjct: 445 AGMVLKVL 452
>AB040912-1|BAA96003.2| 1022|Homo sapiens KIAA1479 protein protein.
Length = 1022
Score = 53.6 bits (123), Expect = 7e-07
Identities = 25/68 (36%), Positives = 41/68 (60%)
Frame = +3
Query: 36 DEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVLYIGTD 215
DE ++F+K+HPLMD AVP P + ++YR +AI+V A Y V+++G++
Sbjct: 398 DETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYRLTAISV--DHSAGPYQNYTVIFVGSE 455
Query: 216 DGRVIKAV 239
G V+K +
Sbjct: 456 AGMVLKVL 463
Score = 34.3 bits (75), Expect = 0.43
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 386 LIVASGDIIKAVTLSHCGNVQSCRE-CVSLQDPHCAWDSK 502
L VA I + LS C SC++ C++ +DP+C W S+
Sbjct: 510 LYVAFSSCIIRIPLSRCERYGSCKKSCIASRDPYCGWLSQ 549
>BX537671-1|CAD97806.1| 681|Homo sapiens hypothetical protein
protein.
Length = 681
Score = 52.8 bits (121), Expect = 1e-06
Identities = 34/78 (43%), Positives = 50/78 (64%)
Frame = +3
Query: 12 VEDSRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKY 191
+ S L D V+NF+K H LMD V S R +L++ Q R+ +AVH +V ++ + Y
Sbjct: 253 INSSLQLPDRVLNFLKDHFLMDGQVRS---RMLLLQP--QARYQRVAVH-RVPGLH-HTY 305
Query: 192 DVLYIGTDDGRVIKAVNV 245
DVL++GT DGR+ KAV+V
Sbjct: 306 DVLFLGTGDGRLHKAVSV 323
Score = 45.2 bits (102), Expect = 2e-04
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +2
Query: 302 RTAVISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDP 481
R +I E Q+ G P++ + + L AS + V +++C +SC +C+ +DP
Sbjct: 326 RVHIIEELQIFSSGQPVQNLLLDTHRGLLYAASHSGVVQVPMANCSLYRSCGDCLLARDP 385
Query: 482 HCAW 493
+CAW
Sbjct: 386 YCAW 389
>BC126438-1|AAI26439.1| 837|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 837
Score = 52.8 bits (121), Expect = 1e-06
Identities = 34/78 (43%), Positives = 50/78 (64%)
Frame = +3
Query: 12 VEDSRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKY 191
+ S L D V+NF+K H LMD V S R +L++ Q R+ +AVH +V ++ + Y
Sbjct: 409 INSSLQLPDRVLNFLKDHFLMDGQVRS---RMLLLQP--QARYQRVAVH-RVPGLH-HTY 461
Query: 192 DVLYIGTDDGRVIKAVNV 245
DVL++GT DGR+ KAV+V
Sbjct: 462 DVLFLGTGDGRLHKAVSV 479
Score = 45.2 bits (102), Expect = 2e-04
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +2
Query: 302 RTAVISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDP 481
R +I E Q+ G P++ + + L AS + V +++C +SC +C+ +DP
Sbjct: 482 RVHIIEELQIFSSGQPVQNLLLDTHRGLLYAASHSGVVQVPMANCSLYRSCGDCLLARDP 541
Query: 482 HCAW 493
+CAW
Sbjct: 542 YCAW 545
>BC110853-1|AAI10854.1| 837|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 837
Score = 52.8 bits (121), Expect = 1e-06
Identities = 34/78 (43%), Positives = 50/78 (64%)
Frame = +3
Query: 12 VEDSRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKY 191
+ S L D V+NF+K H LMD V S R +L++ Q R+ +AVH +V ++ + Y
Sbjct: 409 INSSLQLPDRVLNFLKDHFLMDGQVRS---RMLLLQP--QARYQRVAVH-RVPGLH-HTY 461
Query: 192 DVLYIGTDDGRVIKAVNV 245
DVL++GT DGR+ KAV+V
Sbjct: 462 DVLFLGTGDGRLHKAVSV 479
Score = 45.2 bits (102), Expect = 2e-04
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +2
Query: 302 RTAVISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDP 481
R +I E Q+ G P++ + + L AS + V +++C +SC +C+ +DP
Sbjct: 482 RVHIIEELQIFSSGQPVQNLLLDTHRGLLYAASHSGVVQVPMANCSLYRSCGDCLLARDP 541
Query: 482 HCAW 493
+CAW
Sbjct: 542 YCAW 545
>BC094849-1|AAH94849.1| 521|Homo sapiens SEMA4B protein protein.
Length = 521
Score = 52.8 bits (121), Expect = 1e-06
Identities = 34/78 (43%), Positives = 50/78 (64%)
Frame = +3
Query: 12 VEDSRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKY 191
+ S L D V+NF+K H LMD V S R +L++ Q R+ +AVH +V ++ + Y
Sbjct: 93 INSSLQLPDRVLNFLKDHFLMDGQVRS---RMLLLQP--QARYQRVAVH-RVPGLH-HTY 145
Query: 192 DVLYIGTDDGRVIKAVNV 245
DVL++GT DGR+ KAV+V
Sbjct: 146 DVLFLGTGDGRLHKAVSV 163
Score = 45.2 bits (102), Expect = 2e-04
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +2
Query: 302 RTAVISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDP 481
R +I E Q+ G P++ + + L AS + V +++C +SC +C+ +DP
Sbjct: 166 RVHIIEELQIFSSGQPVQNLLLDTHRGLLYAASHSGVVQVPMANCSLYRSCGDCLLARDP 225
Query: 482 HCAW 493
+CAW
Sbjct: 226 YCAW 229
>BC017658-1|AAH17658.1| 458|Homo sapiens SEMA4B protein protein.
Length = 458
Score = 52.8 bits (121), Expect = 1e-06
Identities = 34/78 (43%), Positives = 50/78 (64%)
Frame = +3
Query: 12 VEDSRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKY 191
+ S L D V+NF+K H LMD V S R +L++ Q R+ +AVH +V ++ + Y
Sbjct: 30 INSSLQLPDRVLNFLKDHFLMDGQVRS---RMLLLQP--QARYQRVAVH-RVPGLH-HTY 82
Query: 192 DVLYIGTDDGRVIKAVNV 245
DVL++GT DGR+ KAV+V
Sbjct: 83 DVLFLGTGDGRLHKAVSV 100
Score = 45.2 bits (102), Expect = 2e-04
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +2
Query: 302 RTAVISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDP 481
R +I E Q+ G P++ + + L AS + V +++C +SC +C+ +DP
Sbjct: 103 RVHIIEELQIFSSGQPVQNLLLDTHRGLLYAASHSGVVQVPMANCSLYRSCGDCLLARDP 162
Query: 482 HCAW 493
+CAW
Sbjct: 163 YCAW 166
>BC010701-1|AAH10701.2| 530|Homo sapiens SEMA4B protein protein.
Length = 530
Score = 52.8 bits (121), Expect = 1e-06
Identities = 34/78 (43%), Positives = 50/78 (64%)
Frame = +3
Query: 12 VEDSRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKY 191
+ S L D V+NF+K H LMD V S R +L++ Q R+ +AVH +V ++ + Y
Sbjct: 102 INSSLQLPDRVLNFLKDHFLMDGQVRS---RMLLLQP--QARYQRVAVH-RVPGLH-HTY 154
Query: 192 DVLYIGTDDGRVIKAVNV 245
DVL++GT DGR+ KAV+V
Sbjct: 155 DVLFLGTGDGRLHKAVSV 172
Score = 45.2 bits (102), Expect = 2e-04
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +2
Query: 302 RTAVISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDP 481
R +I E Q+ G P++ + + L AS + V +++C +SC +C+ +DP
Sbjct: 175 RVHIIEELQIFSSGQPVQNLLLDTHRGLLYAASHSGVVQVPMANCSLYRSCGDCLLARDP 234
Query: 482 HCAW 493
+CAW
Sbjct: 235 YCAW 238
>AY445887-1|AAR15707.1| 837|Homo sapiens semaphorin 4b precursor
protein.
Length = 837
Score = 52.8 bits (121), Expect = 1e-06
Identities = 34/78 (43%), Positives = 50/78 (64%)
Frame = +3
Query: 12 VEDSRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKY 191
+ S L D V+NF+K H LMD V S R +L++ Q R+ +AVH +V ++ + Y
Sbjct: 409 INSSLQLPDRVLNFLKDHFLMDGQVRS---RMLLLQP--QARYQRVAVH-RVPGLH-HTY 461
Query: 192 DVLYIGTDDGRVIKAVNV 245
DVL++GT DGR+ KAV+V
Sbjct: 462 DVLFLGTGDGRLHKAVSV 479
Score = 45.2 bits (102), Expect = 2e-04
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +2
Query: 302 RTAVISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDP 481
R +I E Q+ G P++ + + L AS + V +++C +SC +C+ +DP
Sbjct: 482 RVHIIEELQIFSSGQPVQNLLLDTHRGLLYAASHSGVVQVPMANCSLYRSCGDCLLARDP 541
Query: 482 HCAW 493
+CAW
Sbjct: 542 YCAW 545
>AY358392-1|AAQ88758.1| 837|Homo sapiens semaphorin C protein.
Length = 837
Score = 52.8 bits (121), Expect = 1e-06
Identities = 34/78 (43%), Positives = 50/78 (64%)
Frame = +3
Query: 12 VEDSRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKY 191
+ S L D V+NF+K H LMD V S R +L++ Q R+ +AVH +V ++ + Y
Sbjct: 409 INSSLQLPDRVLNFLKDHFLMDGQVRS---RMLLLQP--QARYQRVAVH-RVPGLH-HTY 461
Query: 192 DVLYIGTDDGRVIKAVNV 245
DVL++GT DGR+ KAV+V
Sbjct: 462 DVLFLGTGDGRLHKAVSV 479
Score = 45.2 bits (102), Expect = 2e-04
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +2
Query: 302 RTAVISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDP 481
R +I E Q+ G P++ + + L AS + V +++C +SC +C+ +DP
Sbjct: 482 RVHIIEELQIFSSGQPVQNLLLDTHRGLLYAASHSGVVQVPMANCSLYRSCGDCLLARDP 541
Query: 482 HCAW 493
+CAW
Sbjct: 542 YCAW 545
>AL390081-1|CAB98205.1| 673|Homo sapiens SEMA4B, Semaphorin 4B
protein.
Length = 673
Score = 52.8 bits (121), Expect = 1e-06
Identities = 34/78 (43%), Positives = 50/78 (64%)
Frame = +3
Query: 12 VEDSRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKY 191
+ S L D V+NF+K H LMD V S R +L++ Q R+ +AVH +V ++ + Y
Sbjct: 245 INSSLQLPDRVLNFLKDHFLMDGQVRS---RMLLLQP--QARYQRVAVH-RVPGLH-HTY 297
Query: 192 DVLYIGTDDGRVIKAVNV 245
DVL++GT DGR+ KAV+V
Sbjct: 298 DVLFLGTGDGRLHKAVSV 315
Score = 45.2 bits (102), Expect = 2e-04
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +2
Query: 302 RTAVISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDP 481
R +I E Q+ G P++ + + L AS + V +++C +SC +C+ +DP
Sbjct: 318 RVHIIEELQIFSSGQPVQNLLLDTHRGLLYAASHSGVVQVPMANCSLYRSCGDCLLARDP 377
Query: 482 HCAW 493
+CAW
Sbjct: 378 YCAW 381
>AK026133-1|BAB15372.1| 380|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22480 fis, clone HRC10841. ).
Length = 380
Score = 52.8 bits (121), Expect = 1e-06
Identities = 34/78 (43%), Positives = 50/78 (64%)
Frame = +3
Query: 12 VEDSRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKY 191
+ S L D V+NF+K H LMD V S R +L++ Q R+ +AVH +V ++ + Y
Sbjct: 47 INSSLQLPDRVLNFLKDHFLMDGQVRS---RMLLLQP--QARYQRVAVH-RVPGLH-HTY 99
Query: 192 DVLYIGTDDGRVIKAVNV 245
DVL++GT DGR+ KAV+V
Sbjct: 100 DVLFLGTGDGRLHKAVSV 117
Score = 45.2 bits (102), Expect = 2e-04
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +2
Query: 302 RTAVISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDP 481
R +I E Q+ G P++ + + L AS + V +++C +SC +C+ +DP
Sbjct: 120 RVHIIEELQIFSSGQPVQNLLLDTHRGLLYAASHSGVVQVPMANCSLYRSCGDCLLARDP 179
Query: 482 HCAW 493
+CAW
Sbjct: 180 YCAW 183
>AB051532-1|BAB21836.1| 893|Homo sapiens KIAA1745 protein protein.
Length = 893
Score = 52.8 bits (121), Expect = 1e-06
Identities = 34/78 (43%), Positives = 50/78 (64%)
Frame = +3
Query: 12 VEDSRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKY 191
+ S L D V+NF+K H LMD V S R +L++ Q R+ +AVH +V ++ + Y
Sbjct: 465 INSSLQLPDRVLNFLKDHFLMDGQVRS---RMLLLQP--QARYQRVAVH-RVPGLH-HTY 517
Query: 192 DVLYIGTDDGRVIKAVNV 245
DVL++GT DGR+ KAV+V
Sbjct: 518 DVLFLGTGDGRLHKAVSV 535
Score = 45.2 bits (102), Expect = 2e-04
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +2
Query: 302 RTAVISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDP 481
R +I E Q+ G P++ + + L AS + V +++C +SC +C+ +DP
Sbjct: 538 RVHIIEELQIFSSGQPVQNLLLDTHRGLLYAASHSGVVQVPMANCSLYRSCGDCLLARDP 597
Query: 482 HCAW 493
+CAW
Sbjct: 598 YCAW 601
>BC020974-1|AAH20974.1| 761|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 761
Score = 51.2 bits (117), Expect = 4e-06
Identities = 24/89 (26%), Positives = 42/89 (47%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCA 490
++ E Q+ P P++ + +A T + V + V ++C +SC +CV +DPHCA
Sbjct: 456 LVEEIQLFPDPEPVRNLQLAPTQGAVFVGFSGGVWRVPRANCSVYESCVDCVLARDPHCA 515
Query: 491 WDSKEQNVHGLGTDNFRILRDSYKM*NME 577
WD + + L N + + N E
Sbjct: 516 WDPESRTCCLLSAPNLNSWKQDMERGNPE 544
Score = 43.2 bits (97), Expect = 0.001
Identities = 25/78 (32%), Positives = 44/78 (56%)
Frame = +3
Query: 33 SDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVLYIGT 212
SD+ + F+K H LMD+ V + P+L++ ++Y A+ Q ++G+ + V+Y+GT
Sbjct: 385 SDKALTFMKDHFLMDEQV---VGTPLLVKSGVEYTRLAVET---AQGLDGHSHLVMYLGT 438
Query: 213 DDGRVIKAVNVASNKAFL 266
G + KAV + A L
Sbjct: 439 TTGSLHKAVVSGDSSAHL 456
>AY358531-1|AAQ88895.1| 761|Homo sapiens semaphorin B protein.
Length = 761
Score = 51.2 bits (117), Expect = 4e-06
Identities = 24/89 (26%), Positives = 42/89 (47%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCA 490
++ E Q+ P P++ + +A T + V + V ++C +SC +CV +DPHCA
Sbjct: 456 LVEEIQLFPDPEPVRNLQLAPTQGAVFVGFSGGVWRVPRANCSVYESCVDCVLARDPHCA 515
Query: 491 WDSKEQNVHGLGTDNFRILRDSYKM*NME 577
WD + + L N + + N E
Sbjct: 516 WDPESRTCCLLSAPNLNSWKQDMERGNPE 544
Score = 43.2 bits (97), Expect = 0.001
Identities = 25/78 (32%), Positives = 44/78 (56%)
Frame = +3
Query: 33 SDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVLYIGT 212
SD+ + F+K H LMD+ V + P+L++ ++Y A+ Q ++G+ + V+Y+GT
Sbjct: 385 SDKALTFMKDHFLMDEQV---VGTPLLVKSGVEYTRLAVET---AQGLDGHSHLVMYLGT 438
Query: 213 DDGRVIKAVNVASNKAFL 266
G + KAV + A L
Sbjct: 439 TTGSLHKAVVSGDSSAHL 456
>AL135927-14|CAI15533.1| 629|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 629
Score = 51.2 bits (117), Expect = 4e-06
Identities = 24/89 (26%), Positives = 42/89 (47%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCA 490
++ E Q+ P P++ + +A T + V + V ++C +SC +CV +DPHCA
Sbjct: 324 LVEEIQLFPDPEPVRNLQLAPTQGAVFVGFSGGVWRVPRANCSVYESCVDCVLARDPHCA 383
Query: 491 WDSKEQNVHGLGTDNFRILRDSYKM*NME 577
WD + + L N + + N E
Sbjct: 384 WDPESRTCCLLSAPNLNSWKQDMERGNPE 412
Score = 43.2 bits (97), Expect = 0.001
Identities = 25/78 (32%), Positives = 44/78 (56%)
Frame = +3
Query: 33 SDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVLYIGT 212
SD+ + F+K H LMD+ V + P+L++ ++Y A+ Q ++G+ + V+Y+GT
Sbjct: 253 SDKALTFMKDHFLMDEQV---VGTPLLVKSGVEYTRLAVET---AQGLDGHSHLVMYLGT 306
Query: 213 DDGRVIKAVNVASNKAFL 266
G + KAV + A L
Sbjct: 307 TTGSLHKAVVSGDSSAHL 324
>AL135927-12|CAI15531.1| 723|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 723
Score = 51.2 bits (117), Expect = 4e-06
Identities = 24/89 (26%), Positives = 42/89 (47%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCA 490
++ E Q+ P P++ + +A T + V + V ++C +SC +CV +DPHCA
Sbjct: 418 LVEEIQLFPDPEPVRNLQLAPTQGAVFVGFSGGVWRVPRANCSVYESCVDCVLARDPHCA 477
Query: 491 WDSKEQNVHGLGTDNFRILRDSYKM*NME 577
WD + + L N + + N E
Sbjct: 478 WDPESRTCCLLSAPNLNSWKQDMERGNPE 506
Score = 43.2 bits (97), Expect = 0.001
Identities = 25/78 (32%), Positives = 44/78 (56%)
Frame = +3
Query: 33 SDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVLYIGT 212
SD+ + F+K H LMD+ V + P+L++ ++Y A+ Q ++G+ + V+Y+GT
Sbjct: 347 SDKALTFMKDHFLMDEQV---VGTPLLVKSGVEYTRLAVET---AQGLDGHSHLVMYLGT 400
Query: 213 DDGRVIKAVNVASNKAFL 266
G + KAV + A L
Sbjct: 401 TTGSLHKAVVSGDSSAHL 418
>AL135927-11|CAI15530.1| 761|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 761
Score = 51.2 bits (117), Expect = 4e-06
Identities = 24/89 (26%), Positives = 42/89 (47%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCA 490
++ E Q+ P P++ + +A T + V + V ++C +SC +CV +DPHCA
Sbjct: 456 LVEEIQLFPDPEPVRNLQLAPTQGAVFVGFSGGVWRVPRANCSVYESCVDCVLARDPHCA 515
Query: 491 WDSKEQNVHGLGTDNFRILRDSYKM*NME 577
WD + + L N + + N E
Sbjct: 516 WDPESRTCCLLSAPNLNSWKQDMERGNPE 544
Score = 43.2 bits (97), Expect = 0.001
Identities = 25/78 (32%), Positives = 44/78 (56%)
Frame = +3
Query: 33 SDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVLYIGT 212
SD+ + F+K H LMD+ V + P+L++ ++Y A+ Q ++G+ + V+Y+GT
Sbjct: 385 SDKALTFMKDHFLMDEQV---VGTPLLVKSGVEYTRLAVET---AQGLDGHSHLVMYLGT 438
Query: 213 DDGRVIKAVNVASNKAFL 266
G + KAV + A L
Sbjct: 439 TTGSLHKAVVSGDSSAHL 456
>AK022349-1|BAB14018.1| 328|Homo sapiens protein ( Homo sapiens
cDNA FLJ12287 fis, clone MAMMA1001771, moderately
similar to M.musculus mRNA for semaphorin B. ).
Length = 328
Score = 51.2 bits (117), Expect = 4e-06
Identities = 24/89 (26%), Positives = 42/89 (47%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCA 490
++ E Q+ P P++ + +A T + V + V ++C +SC +CV +DPHCA
Sbjct: 23 LVEEIQLFPDPEPVRNLQLAPTQGAVFVGFSGGVWRVPRANCSVYESCVDCVLARDPHCA 82
Query: 491 WDSKEQNVHGLGTDNFRILRDSYKM*NME 577
WD + + L N + + N E
Sbjct: 83 WDPESRTCCLLSAPNLNSWKQDMERGNPE 111
>AB029394-1|BAB20087.1| 762|Homo sapiens SEMB protein.
Length = 762
Score = 51.2 bits (117), Expect = 4e-06
Identities = 24/89 (26%), Positives = 42/89 (47%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCA 490
++ E Q+ P P++ + +A T + V + V ++C +SC +CV +DPHCA
Sbjct: 457 LVEEIQLFPDPEPVRNLQLAPTQGAVFVGFSGGVWRVPRANCSVYESCVDCVLARDPHCA 516
Query: 491 WDSKEQNVHGLGTDNFRILRDSYKM*NME 577
WD + + L N + + N E
Sbjct: 517 WDPESRTCCLLSAPNLNSWKQDMERGNPE 545
Score = 43.2 bits (97), Expect = 0.001
Identities = 25/78 (32%), Positives = 44/78 (56%)
Frame = +3
Query: 33 SDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVLYIGT 212
SD+ + F+K H LMD+ V + P+L++ ++Y A+ Q ++G+ + V+Y+GT
Sbjct: 386 SDKALTFMKDHFLMDEQV---VGTPLLVKSGVEYTRLAVET---AQGLDGHSHLVMYLGT 439
Query: 213 DDGRVIKAVNVASNKAFL 266
G + KAV + A L
Sbjct: 440 TTGSLHKAVVSGDSSAHL 457
>AL592424-4|CAI16377.1| 962|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 962
Score = 50.8 bits (116), Expect = 5e-06
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNG--NKYD 194
SR L D+V+ F+KAHPL+D AVP +P+L S A+ V M G +
Sbjct: 385 SRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTS-----RALLTQVAVDGMAGPHSNIT 439
Query: 195 VLYIGTDDGRVIKAV 239
V+++G++DG V+K +
Sbjct: 440 VMFLGSNDGTVLKVL 454
Score = 35.5 bits (78), Expect = 0.19
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 383 KLIVASGDIIKAVTLSHCGNVQSC-RECVSLQDPHCAWDS 499
+L VA I + LS C +C R C++ QDP+C W S
Sbjct: 502 RLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWHS 541
>AL592424-3|CAI16378.1| 930|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 930
Score = 50.8 bits (116), Expect = 5e-06
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNG--NKYD 194
SR L D+V+ F+KAHPL+D AVP +P+L S A+ V M G +
Sbjct: 385 SRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTS-----RALLTQVAVDGMAGPHSNIT 439
Query: 195 VLYIGTDDGRVIKAV 239
V+++G++DG V+K +
Sbjct: 440 VMFLGSNDGTVLKVL 454
Score = 35.5 bits (78), Expect = 0.19
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 383 KLIVASGDIIKAVTLSHCGNVQSC-RECVSLQDPHCAWDS 499
+L VA I + LS C +C R C++ QDP+C W S
Sbjct: 502 RLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWHS 541
>AL592424-2|CAI16376.1| 922|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 922
Score = 50.8 bits (116), Expect = 5e-06
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNG--NKYD 194
SR L D+V+ F+KAHPL+D AVP +P+L S A+ V M G +
Sbjct: 345 SRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTS-----RALLTQVAVDGMAGPHSNIT 399
Query: 195 VLYIGTDDGRVIKAV 239
V+++G++DG V+K +
Sbjct: 400 VMFLGSNDGTVLKVL 414
Score = 35.5 bits (78), Expect = 0.19
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 383 KLIVASGDIIKAVTLSHCGNVQSC-RECVSLQDPHCAWDS 499
+L VA I + LS C +C R C++ QDP+C W S
Sbjct: 462 RLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWHS 501
>AF339154-1|AAL72100.1| 962|Homo sapiens semaphorin Y protein.
Length = 962
Score = 50.8 bits (116), Expect = 5e-06
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNG--NKYD 194
SR L D+V+ F+KAHPL+D AVP +P+L S A+ V M G +
Sbjct: 385 SRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTS-----RALLTQVAVDGMAGPHSNIT 439
Query: 195 VLYIGTDDGRVIKAV 239
V+++G++DG V+K +
Sbjct: 440 VMFLGSNDGTVLKVL 454
Score = 35.5 bits (78), Expect = 0.19
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 383 KLIVASGDIIKAVTLSHCGNVQSC-RECVSLQDPHCAWDS 499
+L VA I + LS C +C R C++ QDP+C W S
Sbjct: 502 RLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWHS 541
>AF339153-1|AAL72099.1| 922|Homo sapiens semaphorin Y short isoform
2 protein.
Length = 922
Score = 50.8 bits (116), Expect = 5e-06
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNG--NKYD 194
SR L D+V+ F+KAHPL+D AVP +P+L S A+ V M G +
Sbjct: 345 SRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTS-----RALLTQVAVDGMAGPHSNIT 399
Query: 195 VLYIGTDDGRVIKAV 239
V+++G++DG V+K +
Sbjct: 400 VMFLGSNDGTVLKVL 414
Score = 35.5 bits (78), Expect = 0.19
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 383 KLIVASGDIIKAVTLSHCGNVQSC-RECVSLQDPHCAWDS 499
+L VA I + LS C +C R C++ QDP+C W S
Sbjct: 462 RLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWHS 501
>AF339152-1|AAL72098.1| 930|Homo sapiens semaphorin Y short isoform
1 protein.
Length = 930
Score = 50.8 bits (116), Expect = 5e-06
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNG--NKYD 194
SR L D+V+ F+KAHPL+D AVP +P+L S A+ V M G +
Sbjct: 385 SRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTS-----RALLTQVAVDGMAGPHSNIT 439
Query: 195 VLYIGTDDGRVIKAV 239
V+++G++DG V+K +
Sbjct: 440 VMFLGSNDGTVLKVL 454
Score = 35.5 bits (78), Expect = 0.19
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 383 KLIVASGDIIKAVTLSHCGNVQSC-RECVSLQDPHCAWDS 499
+L VA I + LS C +C R C++ QDP+C W S
Sbjct: 502 RLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWHS 541
>AB058772-1|BAB47498.1| 935|Homo sapiens KIAA1869 protein protein.
Length = 935
Score = 50.8 bits (116), Expect = 5e-06
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNG--NKYD 194
SR L D+V+ F+KAHPL+D AVP +P+L S A+ V M G +
Sbjct: 390 SRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTS-----RALLTQVAVDGMAGPHSNIT 444
Query: 195 VLYIGTDDGRVIKAV 239
V+++G++DG V+K +
Sbjct: 445 VMFLGSNDGTVLKVL 459
Score = 35.5 bits (78), Expect = 0.19
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 383 KLIVASGDIIKAVTLSHCGNVQSC-RECVSLQDPHCAWDS 499
+L VA I + LS C +C R C++ QDP+C W S
Sbjct: 507 RLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWHS 546
>AB022434-1|BAB20670.1| 930|Homo sapiens semaphorin Y protein.
Length = 930
Score = 50.8 bits (116), Expect = 5e-06
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNG--NKYD 194
SR L D+V+ F+KAHPL+D AVP +P+L S A+ V M G +
Sbjct: 385 SRDLPDDVLTFIKAHPLLDPAVPPVTHQPLLTLTS-----RALLTQVAVDGMAGPHSNIT 439
Query: 195 VLYIGTDDGRVIKAV 239
V+++G++DG V+K +
Sbjct: 440 VMFLGSNDGTVLKVL 454
Score = 35.5 bits (78), Expect = 0.19
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 383 KLIVASGDIIKAVTLSHCGNVQSC-RECVSLQDPHCAWDS 499
+L VA I + LS C +C R C++ QDP+C W S
Sbjct: 502 RLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWHS 541
>BC128579-1|AAI28580.1| 702|Homo sapiens SEMA4G protein protein.
Length = 702
Score = 48.8 bits (111), Expect = 2e-05
Identities = 29/77 (37%), Positives = 46/77 (59%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S+ L V++FVK HPLM + V RP+L++ ++ R++ + P V G YD+L
Sbjct: 390 SQDLPSLVLDFVKLHPLMARPVVPTRGRPLLLKRNI--RYTHLTGTP-VTTPAGPTYDLL 446
Query: 201 YIGTDDGRVIKAVNVAS 251
++GT DG + KAV + S
Sbjct: 447 FLGTADGWIHKAVVLGS 463
Score = 47.2 bits (107), Expect = 6e-05
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCA 490
+I E QV + ++ + ++L L V + + + LS C +SC +C+ +DP+C
Sbjct: 467 IIEETQVFRESQSVENLVISLLQHSLYVGAPSGVIQLPLSSCSRYRSCYDCILARDPYCG 526
Query: 491 WD 496
WD
Sbjct: 527 WD 528
>BC110382-1|AAI10383.1| 843|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 843
Score = 48.8 bits (111), Expect = 2e-05
Identities = 29/77 (37%), Positives = 46/77 (59%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S+ L V++FVK HPLM + V RP+L++ ++ R++ + P V G YD+L
Sbjct: 390 SQDLPSLVLDFVKLHPLMARPVVPTRGRPLLLKRNI--RYTHLTGTP-VTTPAGPTYDLL 446
Query: 201 YIGTDDGRVIKAVNVAS 251
++GT DG + KAV + S
Sbjct: 447 FLGTADGWIHKAVVLGS 463
Score = 47.2 bits (107), Expect = 6e-05
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCA 490
+I E QV + ++ + ++L L V + + + LS C +SC +C+ +DP+C
Sbjct: 467 IIEETQVFRESQSVENLVISLLQHSLYVGAPSGVIQLPLSSCSRYRSCYDCILARDPYCG 526
Query: 491 WD 496
WD
Sbjct: 527 WD 528
>BC051030-1|AAH51030.1| 838|Homo sapiens SEMA4G protein protein.
Length = 838
Score = 48.8 bits (111), Expect = 2e-05
Identities = 29/77 (37%), Positives = 46/77 (59%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S+ L V++FVK HPLM + V RP+L++ ++ R++ + P V G YD+L
Sbjct: 390 SQDLPSLVLDFVKLHPLMARPVVPTRGRPLLLKRNI--RYTHLTGTP-VTTPAGPTYDLL 446
Query: 201 YIGTDDGRVIKAVNVAS 251
++GT DG + KAV + S
Sbjct: 447 FLGTADGWIHKAVVLGS 463
Score = 47.2 bits (107), Expect = 6e-05
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCA 490
+I E QV + ++ + ++L L V + + + LS C +SC +C+ +DP+C
Sbjct: 467 IIEETQVFRESQSVENLVISLLQHSLYVGAPSGVIQLPLSSCSRYRSCYDCILARDPYCG 526
Query: 491 WD 496
WD
Sbjct: 527 WD 528
>AL133215-2|CAI10916.1| 843|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 843
Score = 48.8 bits (111), Expect = 2e-05
Identities = 29/77 (37%), Positives = 46/77 (59%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S+ L V++FVK HPLM + V RP+L++ ++ R++ + P V G YD+L
Sbjct: 390 SQDLPSLVLDFVKLHPLMARPVVPTRGRPLLLKRNI--RYTHLTGTP-VTTPAGPTYDLL 446
Query: 201 YIGTDDGRVIKAVNVAS 251
++GT DG + KAV + S
Sbjct: 447 FLGTADGWIHKAVVLGS 463
Score = 47.2 bits (107), Expect = 6e-05
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCA 490
+I E QV + ++ + ++L L V + + + LS C +SC +C+ +DP+C
Sbjct: 467 IIEETQVFRESQSVENLVISLLQHSLYVGAPSGVIQLPLSSCSRYRSCYDCILARDPYCG 526
Query: 491 WD 496
WD
Sbjct: 527 WD 528
>AL133215-1|CAB92805.1| 838|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 838
Score = 48.8 bits (111), Expect = 2e-05
Identities = 29/77 (37%), Positives = 46/77 (59%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S+ L V++FVK HPLM + V RP+L++ ++ R++ + P V G YD+L
Sbjct: 390 SQDLPSLVLDFVKLHPLMARPVVPTRGRPLLLKRNI--RYTHLTGTP-VTTPAGPTYDLL 446
Query: 201 YIGTDDGRVIKAVNVAS 251
++GT DG + KAV + S
Sbjct: 447 FLGTADGWIHKAVVLGS 463
Score = 47.2 bits (107), Expect = 6e-05
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCA 490
+I E QV + ++ + ++L L V + + + LS C +SC +C+ +DP+C
Sbjct: 467 IIEETQVFRESQSVENLVISLLQHSLYVGAPSGVIQLPLSSCSRYRSCYDCILARDPYCG 526
Query: 491 WD 496
WD
Sbjct: 527 WD 528
>AB046839-1|BAB13445.1| 869|Homo sapiens KIAA1619 protein protein.
Length = 869
Score = 48.8 bits (111), Expect = 2e-05
Identities = 29/77 (37%), Positives = 46/77 (59%)
Frame = +3
Query: 21 SRTLSDEVVNFVKAHPLMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVL 200
S+ L V++FVK HPLM + V RP+L++ ++ R++ + P V G YD+L
Sbjct: 416 SQDLPSLVLDFVKLHPLMARPVVPTRGRPLLLKRNI--RYTHLTGTP-VTTPAGPTYDLL 472
Query: 201 YIGTDDGRVIKAVNVAS 251
++GT DG + KAV + S
Sbjct: 473 FLGTADGWIHKAVVLGS 489
Score = 47.2 bits (107), Expect = 6e-05
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +2
Query: 311 VISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCA 490
+I E QV + ++ + ++L L V + + + LS C +SC +C+ +DP+C
Sbjct: 493 IIEETQVFRESQSVENLVISLLQHSLYVGAPSGVIQLPLSSCSRYRSCYDCILARDPYCG 552
Query: 491 WD 496
WD
Sbjct: 553 WD 554
>AB046770-1|BAB13376.3| 1462|Homo sapiens KIAA1550 protein protein.
Length = 1462
Score = 46.4 bits (105), Expect = 1e-04
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +2
Query: 326 QVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCAW 493
QV+ G ++ M + E+L + S + V + CG QSC EC+ DPHC W
Sbjct: 42 QVVDPGPVLRDMAFSKDHEQLYIMSERQLTRVPVESCGQYQSCGECLGSGDPHCGW 97
>BC077726-1|AAH77726.1| 1151|Homo sapiens sema domain, seven
thrombospondin repeats (type 1 and type 1-like),
transmembra protein.
Length = 1151
Score = 45.2 bits (102), Expect = 2e-04
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +2
Query: 314 ISEEQVLPQG--VPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHC 487
+ E VLP G P++ + + + L V D + V L C +S C+ +DP+C
Sbjct: 514 LEELHVLPPGRREPLRSLRILHSARALFVGLRDGVLRVPLERCAAYRSQGACLGARDPYC 573
Query: 488 AWDSKEQ 508
WD K+Q
Sbjct: 574 GWDGKQQ 580
Score = 36.7 bits (81), Expect = 0.081
Identities = 25/61 (40%), Positives = 36/61 (59%)
Frame = +3
Query: 69 LMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVLYIGTDDGRVIKAVNVA 248
LM +AV P + + S+ RFS + V VQA + Y VLYIGT+ G ++KA++ A
Sbjct: 450 LMSEAVQPVTPEPCVTQDSV--RFSHLVVD-LVQAKD-TLYHVLYIGTESGTILKALSTA 505
Query: 249 S 251
S
Sbjct: 506 S 506
>AY358124-1|AAQ88491.1| 1092|Homo sapiens SEMA5B protein.
Length = 1092
Score = 45.2 bits (102), Expect = 2e-04
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +2
Query: 314 ISEEQVLPQG--VPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHC 487
+ E VLP G P++ + + + L V D + V L C +S C+ +DP+C
Sbjct: 514 LEELHVLPPGRREPLRSLRILHSARALFVGLRDGVLRVPLERCAAYRSQGACLGARDPYC 573
Query: 488 AWDSKEQ 508
WD K+Q
Sbjct: 574 GWDGKQQ 580
Score = 36.7 bits (81), Expect = 0.081
Identities = 25/61 (40%), Positives = 36/61 (59%)
Frame = +3
Query: 69 LMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVLYIGTDDGRVIKAVNVA 248
LM +AV P + + S+ RFS + V VQA + Y VLYIGT+ G ++KA++ A
Sbjct: 450 LMSEAVQPVTPEPCVTQDSV--RFSHLVVD-LVQAKD-TLYHVLYIGTESGTILKALSTA 505
Query: 249 S 251
S
Sbjct: 506 S 506
>AB040878-1|BAA95969.1| 1202|Homo sapiens KIAA1445 protein protein.
Length = 1202
Score = 45.2 bits (102), Expect = 2e-04
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +2
Query: 314 ISEEQVLPQG--VPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHC 487
+ E VLP G P++ + + + L V D + V L C +S C+ +DP+C
Sbjct: 565 LEELHVLPPGRREPLRSLRILHSARALFVGLRDGVLRVPLERCAAYRSQGACLGARDPYC 624
Query: 488 AWDSKEQ 508
WD K+Q
Sbjct: 625 GWDGKQQ 631
Score = 36.7 bits (81), Expect = 0.081
Identities = 25/61 (40%), Positives = 36/61 (59%)
Frame = +3
Query: 69 LMDKAVPSFLARPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVLYIGTDDGRVIKAVNVA 248
LM +AV P + + S+ RFS + V VQA + Y VLYIGT+ G ++KA++ A
Sbjct: 501 LMSEAVQPVTPEPCVTQDSV--RFSHLVVD-LVQAKD-TLYHVLYIGTESGTILKALSTA 556
Query: 249 S 251
S
Sbjct: 557 S 557
>AK092182-1|BAC03823.1| 132|Homo sapiens protein ( Homo sapiens
cDNA FLJ34863 fis, clone NT2NE2014013, moderately
similar to SEMAPHORIN 3B PRECURSOR. ).
Length = 132
Score = 43.6 bits (98), Expect = 7e-04
Identities = 22/48 (45%), Positives = 33/48 (68%)
Frame = +3
Query: 102 RPILIRVSLQYRFSAIAVHPQVQAMNGNKYDVLYIGTDDGRVIKAVNV 245
RP+ ++V Y F+ IA +V A +G+ YDVL+IGTD G V+K ++V
Sbjct: 11 RPLFLQVGANYTFTQIAAD-RVAAADGH-YDVLFIGTDVGTVLKVISV 56
>AF030339-1|AAC18823.1| 1568|Homo sapiens VESPR protein.
Length = 1568
Score = 40.7 bits (91), Expect = 0.005
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +2
Query: 347 PIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCAW 493
P+K +++ LT +G ++ + +++C +SC EC++ DPHC W
Sbjct: 433 PVKNIYIYLT-------AGKEVRRIRVANCNKHKSCSECLTATDPHCGW 474
>AB208934-1|BAD92171.1| 1211|Homo sapiens plexin C1 variant protein.
Length = 1211
Score = 40.7 bits (91), Expect = 0.005
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +2
Query: 347 PIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCAW 493
P+K +++ LT +G ++ + +++C +SC EC++ DPHC W
Sbjct: 76 PVKNIYIYLT-------AGKEVRRIRVANCNKHKSCSECLTATDPHCGW 117
>X87831-1|CAB57275.1| 1328|Homo sapiens OCT/plexin-A2 protein
protein.
Length = 1328
Score = 40.3 bits (90), Expect = 0.007
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 329 VLPQGVPI-KQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCAW 493
VL G PI + M ++ L V S + V + C +C EC+S DPHC W
Sbjct: 29 VLKDGSPILRDMAFSIDQRYLYVMSERQVTRVPVESCEQYTTCGECLSSGDPHCGW 84
>BC132676-1|AAI32677.1| 1909|Homo sapiens PLXNA2 protein protein.
Length = 1909
Score = 40.3 bits (90), Expect = 0.007
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 329 VLPQGVPI-KQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCAW 493
VL G PI + M ++ L V S + V + C +C EC+S DPHC W
Sbjct: 490 VLKDGSPILRDMAFSIDQRYLYVMSERQVTRVPVESCEQYTTCGECLSSGDPHCGW 545
>AL590138-1|CAI39808.1| 1894|Homo sapiens plexin A2 protein.
Length = 1894
Score = 40.3 bits (90), Expect = 0.007
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 329 VLPQGVPI-KQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCAW 493
VL G PI + M ++ L V S + V + C +C EC+S DPHC W
Sbjct: 475 VLKDGSPILRDMAFSIDQRYLYVMSERQVTRVPVESCEQYTTCGECLSSGDPHCGW 530
>AL356275-5|CAI40198.1| 1894|Homo sapiens plexin A2 protein.
Length = 1894
Score = 40.3 bits (90), Expect = 0.007
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 329 VLPQGVPI-KQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCAW 493
VL G PI + M ++ L V S + V + C +C EC+S DPHC W
Sbjct: 475 VLKDGSPILRDMAFSIDQRYLYVMSERQVTRVPVESCEQYTTCGECLSSGDPHCGW 530
>AB007932-1|BAA32308.1| 1963|Homo sapiens KIAA0463 protein protein.
Length = 1963
Score = 40.3 bits (90), Expect = 0.007
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 329 VLPQGVPI-KQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCAW 493
VL G PI + M ++ L V S + V + C +C EC+S DPHC W
Sbjct: 544 VLKDGSPILRDMAFSIDQRYLYVMSERQVTRVPVESCEQYTTCGECLSSGDPHCGW 599
>X87832-1|CAB57274.1| 1754|Homo sapiens NOV/plexin-A1 protein
protein.
Length = 1754
Score = 36.3 bits (80), Expect = 0.11
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +2
Query: 302 RTAVISEEQVLPQGVPI-KQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQD 478
R A+ E V +G PI + + ++ + L + + V + C SC C+ +D
Sbjct: 448 RPALAYESVVAQEGSPILRDLVLSPNHQYLYAMTEKQVTRVPVESCVQYTSCELCLGSRD 507
Query: 479 PHCAW 493
PHC W
Sbjct: 508 PHCGW 512
>U52840-1|AAC09473.1| 1074|Homo sapiens semaphorin F homolog
protein.
Length = 1074
Score = 35.9 bits (79), Expect = 0.14
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 305 TAVISEEQVLPQG--VPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQD 478
+ ++ E ++ P+ PI+ + + + L V + + + L C ++ C+ QD
Sbjct: 442 SCLLEEIELFPERRREPIRSLQILHSQSVLFVGLREHVVKIPLKRCQFYRTRSTCIGAQD 501
Query: 479 PHCAWD 496
P+C WD
Sbjct: 502 PYCGWD 507
>BC115696-1|AAI15697.1| 1074|Homo sapiens sema domain, seven
thrombospondin repeats (type 1 and type 1-like),
transmembra protein.
Length = 1074
Score = 35.9 bits (79), Expect = 0.14
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 305 TAVISEEQVLPQG--VPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQD 478
+ ++ E ++ P+ PI+ + + + L V + + + L C ++ C+ QD
Sbjct: 442 SCLLEEIELFPERRREPIRSLQILHSQSVLFVGLREHVVKIPLKRCQFYRTRSTCIGAQD 501
Query: 479 PHCAWD 496
P+C WD
Sbjct: 502 PYCGWD 507
>AF055020-1|AAC09365.1| 446|Homo sapiens unknown protein.
Length = 446
Score = 35.5 bits (78), Expect = 0.19
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 383 KLIVASGDIIKAVTLSHCGNVQSC-RECVSLQDPHCAWDS 499
+L VA I + LS C +C R C++ QDP+C W S
Sbjct: 18 RLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWHS 57
>AC006322-1|AAS02028.1| 287|Homo sapiens unknown protein.
Length = 287
Score = 34.3 bits (75), Expect = 0.43
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 350 IKQMHVALTTEKLIVASGDIIKAVTLSHCGNV-QSCRECVSLQDPHCAWD 496
I M ++ ++L + S + + L C ++C EC +DP+CAWD
Sbjct: 5 ISAMELSTKQQQLYIGSTAGVAQLPLHRCDIYGKACAECCLARDPYCAWD 54
>X87904-1|CAB57277.1| 2135|Homo sapiens semaphorin receptor protein.
Length = 2135
Score = 32.3 bits (70), Expect = 1.7
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 374 TTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCAW 493
T E L V + + V ++ C C C++ +DP+C W
Sbjct: 462 TFEHLYVMTQSTLLKVPVASCAQHLDCASCLAHRDPYCGW 501
>X87852-1|CAA61132.1| 1871|Homo sapiens SEX protein protein.
Length = 1871
Score = 32.3 bits (70), Expect = 1.7
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +2
Query: 410 IKAVTLSHCGNVQSCRECVSLQDPHCAW 493
+ + + C QSC C+ DPHC W
Sbjct: 483 VSQLPVETCEQYQSCAACLGSGDPHCGW 510
>BX936365-2|CAI43194.1| 1871|Homo sapiens plexin A3 protein.
Length = 1871
Score = 32.3 bits (70), Expect = 1.7
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +2
Query: 410 IKAVTLSHCGNVQSCRECVSLQDPHCAW 493
+ + + C QSC C+ DPHC W
Sbjct: 483 VSQLPVETCEQYQSCAACLGSGDPHCGW 510
>BC146793-1|AAI46794.1| 2135|Homo sapiens plexin B1 protein.
Length = 2135
Score = 32.3 bits (70), Expect = 1.7
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 374 TTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCAW 493
T E L V + + V ++ C C C++ +DP+C W
Sbjct: 462 TFEHLYVMTQSTLLKVPVASCAQHLDCASCLAHRDPYCGW 501
>BC101647-1|AAI01648.1| 666|Homo sapiens semaphorin 7A, GPI
membrane anchor (John Milton Hagen blood group) protein.
Length = 666
Score = 32.3 bits (70), Expect = 1.7
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +2
Query: 314 ISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQS-CRECVSLQDPHCA 490
I E Q + I+ M + KL V+S + V L C C C+ +DP+C
Sbjct: 453 IMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVPLDLCEVYGGGCHGCLMSRDPYCG 512
Query: 491 WD 496
WD
Sbjct: 513 WD 514
>BC101643-1|AAI01644.1| 666|Homo sapiens semaphorin 7A, GPI
membrane anchor (John Milton Hagen blood group) protein.
Length = 666
Score = 32.3 bits (70), Expect = 1.7
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +2
Query: 314 ISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQS-CRECVSLQDPHCA 490
I E Q + I+ M + KL V+S + V L C C C+ +DP+C
Sbjct: 453 IMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVPLDLCEVYGGGCHGCLMSRDPYCG 512
Query: 491 WD 496
WD
Sbjct: 513 WD 514
>AY885237-1|AAW62253.1| 666|Homo sapiens sema domain,
immunoglobulin domain (Ig), and GPI membrane anchor,
(semaphorin) protein.
Length = 666
Score = 32.3 bits (70), Expect = 1.7
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +2
Query: 314 ISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQS-CRECVSLQDPHCA 490
I E Q + I+ M + KL V+S + V L C C C+ +DP+C
Sbjct: 453 IMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVPLDLCEVYGGGCHGCLMSRDPYCG 512
Query: 491 WD 496
WD
Sbjct: 513 WD 514
>AM180451-1|CAJ55404.1| 666|Homo sapiens semaphorin 7A protein.
Length = 666
Score = 32.3 bits (70), Expect = 1.7
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +2
Query: 314 ISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQS-CRECVSLQDPHCA 490
I E Q + I+ M + KL V+S + V L C C C+ +DP+C
Sbjct: 453 IMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVPLDLCEVYGGGCHGCLMSRDPYCG 512
Query: 491 WD 496
WD
Sbjct: 513 WD 514
>AM180450-1|CAJ55403.1| 666|Homo sapiens semaphorin 7A protein.
Length = 666
Score = 32.3 bits (70), Expect = 1.7
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +2
Query: 314 ISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQS-CRECVSLQDPHCA 490
I E Q + I+ M + KL V+S + V L C C C+ +DP+C
Sbjct: 453 IMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVPLDLCEVYGGGCHGCLMSRDPYCG 512
Query: 491 WD 496
WD
Sbjct: 513 WD 514
>AM180449-1|CAJ55402.1| 666|Homo sapiens semaphorin 7A protein.
Length = 666
Score = 32.3 bits (70), Expect = 1.7
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +2
Query: 314 ISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQS-CRECVSLQDPHCA 490
I E Q + I+ M + KL V+S + V L C C C+ +DP+C
Sbjct: 453 IMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVPLDLCEVYGGGCHGCLMSRDPYCG 512
Query: 491 WD 496
WD
Sbjct: 513 WD 514
>AM180448-1|CAJ55401.1| 666|Homo sapiens semaphorin 7A protein.
Length = 666
Score = 32.3 bits (70), Expect = 1.7
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +2
Query: 314 ISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQS-CRECVSLQDPHCA 490
I E Q + I+ M + KL V+S + V L C C C+ +DP+C
Sbjct: 453 IMEIQPFHRAAAIQTMSLDAERRKLYVSSQWEVSQVPLDLCEVYGGGCHGCLMSRDPYCG 512
Query: 491 WD 496
WD
Sbjct: 513 WD 514
>AM180447-1|CAJ55400.1| 666|Homo sapiens semaphorin 7A protein.
Length = 666
Score = 32.3 bits (70), Expect = 1.7
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +2
Query: 314 ISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQS-CRECVSLQDPHCA 490
I E Q + I+ M + KL V+S + V L C C C+ +DP+C
Sbjct: 453 IMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVPLDLCEVYGGGCHGCLMSRDPYCG 512
Query: 491 WD 496
WD
Sbjct: 513 WD 514
>AM180445-1|CAJ55398.1| 666|Homo sapiens semaphorin 7A protein.
Length = 666
Score = 32.3 bits (70), Expect = 1.7
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +2
Query: 314 ISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQS-CRECVSLQDPHCA 490
I E Q + I+ M + KL V+S + V L C C C+ +DP+C
Sbjct: 453 IMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVPLDLCEVYGGGCHGCLMSRDPYCG 512
Query: 491 WD 496
WD
Sbjct: 513 WD 514
>AJ011415-1|CAB56222.1| 1952|Homo sapiens plexin-B1/SEP receptor
protein.
Length = 1952
Score = 32.3 bits (70), Expect = 1.7
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 374 TTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCAW 493
T E L V + + V ++ C C C++ +DP+C W
Sbjct: 462 TFEHLYVMTQSTLLKVPVASCAQHLDCASCLAHRDPYCGW 501
>AJ011414-1|CAB56221.1| 729|Homo sapiens plexin-B1/SEP receptor
protein.
Length = 729
Score = 32.3 bits (70), Expect = 1.7
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 374 TTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCAW 493
T E L V + + V ++ C C C++ +DP+C W
Sbjct: 462 TFEHLYVMTQSTLLKVPVASCAQHLDCASCLAHRDPYCGW 501
>AF071542-1|AAC80456.1| 666|Homo sapiens semaphorin K1 protein.
Length = 666
Score = 32.3 bits (70), Expect = 1.7
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +2
Query: 314 ISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQS-CRECVSLQDPHCA 490
I E Q + I+ M + KL V+S + V L C C C+ +DP+C
Sbjct: 453 IMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVPLDLCEVYGGGCHGCLMSRDPYCG 512
Query: 491 WD 496
WD
Sbjct: 513 WD 514
>AF069493-1|AAC82642.1| 666|Homo sapiens GPI-anchored membrane
protein CDw108 precursor protein.
Length = 666
Score = 32.3 bits (70), Expect = 1.7
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +2
Query: 314 ISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQS-CRECVSLQDPHCA 490
I E Q + I+ M + KL V+S + V L C C C+ +DP+C
Sbjct: 453 IMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVPLDLCEVYGGGCHGCLMSRDPYCG 512
Query: 491 WD 496
WD
Sbjct: 513 WD 514
>AF030698-1|AAC34261.1| 666|Homo sapiens semaphorin L protein.
Length = 666
Score = 32.3 bits (70), Expect = 1.7
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +2
Query: 314 ISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQS-CRECVSLQDPHCA 490
I E Q + I+ M + KL V+S + V L C C C+ +DP+C
Sbjct: 453 IMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVPLDLCEVYGGGCHGCLMSRDPYCG 512
Query: 491 WD 496
WD
Sbjct: 513 WD 514
>AF030697-1|AAC34741.1| 594|Homo sapiens semaphorin L protein.
Length = 594
Score = 32.3 bits (70), Expect = 1.7
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +2
Query: 314 ISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQS-CRECVSLQDPHCA 490
I E Q + I+ M + KL V+S + V L C C C+ +DP+C
Sbjct: 381 IMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVPLDLCEVYGGGCHGCLMSRDPYCG 440
Query: 491 WD 496
WD
Sbjct: 441 WD 442
>AB007867-1|BAA23703.2| 2143|Homo sapiens KIAA0407 protein.
Length = 2143
Score = 32.3 bits (70), Expect = 1.7
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 374 TTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHCAW 493
T E L V + + V ++ C C C++ +DP+C W
Sbjct: 470 TFEHLYVMTQSTLLKVPVASCAQHLDCASCLAHRDPYCGW 509
>AK074975-1|BAC11326.1| 562|Homo sapiens protein ( Homo sapiens
cDNA FLJ90494 fis, clone NT2RP3003614, highly similar to
Semaphorin 6A precursor. ).
Length = 562
Score = 31.5 bits (68), Expect = 3.1
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +2
Query: 308 AVISEEQVLPQGVPIKQ---MHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRE-CVSLQ 475
+V + E+ GV K+ M + + L VA + V L C C++ C++ +
Sbjct: 2 SVYNSEKCSYDGVEDKRIMGMQLDRASSSLYVAFSTCVIKVPLGRCERHGKCKKTCIASR 61
Query: 476 DPHCAW 493
DP+C W
Sbjct: 62 DPYCGW 67
>AK027471-1|BAB55136.1| 562|Homo sapiens protein ( Homo sapiens
cDNA FLJ14565 fis, clone NT2RM4000233, highly similar to
Mus musculus semaphorin VIa mRNA. ).
Length = 562
Score = 31.5 bits (68), Expect = 3.1
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +2
Query: 308 AVISEEQVLPQGVPIKQ---MHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRE-CVSLQ 475
+V + E+ GV K+ M + + L VA + V L C C++ C++ +
Sbjct: 2 SVYNSEKCSYDGVEDKRIMGMQLDRASSSLYVAFSTCVIKVPLGRCERHGKCKKTCIASR 61
Query: 476 DPHCAW 493
DP+C W
Sbjct: 62 DPYCGW 67
>AK027439-1|BAB55111.1| 507|Homo sapiens protein ( Homo sapiens
cDNA FLJ14533 fis, clone NT2RM2000407, moderately
similar to Mus musculus semaphorin VIa mRNA. ).
Length = 507
Score = 31.5 bits (68), Expect = 3.1
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +2
Query: 308 AVISEEQVLPQGVPIKQ---MHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRE-CVSLQ 475
+V + E+ GV K+ M + + L VA + V L C C++ C++ +
Sbjct: 2 SVYNSEKCSYDGVEDKRIMGMQLDRASSSLYVAFSTCVIKVPLGRCERHGKCKKTCIASR 61
Query: 476 DPHCAW 493
DP+C W
Sbjct: 62 DPYCGW 67
>AF149019-1|AAG01376.1| 1909|Homo sapiens plexin-B3 protein.
Length = 1909
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +2
Query: 311 VISEEQVLPQGVPIK-QMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHC 487
V +QV P G I + + + L V + + + ++ C C C+ QDP C
Sbjct: 432 VYHSQQVGPPGSAISPDLLLDSSGSHLYVLTAHQVDRIPVAACPQFPDCASCLQAQDPLC 491
Query: 488 AW 493
W
Sbjct: 492 GW 493
>AB033032-1|BAA86520.1| 1912|Homo sapiens KIAA1206 protein protein.
Length = 1912
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +2
Query: 311 VISEEQVLPQGVPIK-QMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRECVSLQDPHC 487
V +QV P G I + + + L V + + + ++ C C C+ QDP C
Sbjct: 435 VYHSQQVGPPGSAISPDLLLDSSGSHLYVLTAHQVDRIPVAACPQFPDCASCLQAQDPLC 494
Query: 488 AW 493
W
Sbjct: 495 GW 496
>AK027654-1|BAB55269.1| 574|Homo sapiens protein ( Homo sapiens
cDNA FLJ14748 fis, clone NT2RP3002869, highly similar to
Mus musculus semaphorin VIa mRNA. ).
Length = 574
Score = 31.1 bits (67), Expect = 4.0
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +2
Query: 350 IKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQSCRE-CVSLQDPHCAW 493
I M + + L VA + V L C C++ C++ +DP+C W
Sbjct: 31 IMGMQLDRASSSLYVAFSTCVIKVPLGRCERHGKCKKTCIASRDPYCGW 79
>AM180446-1|CAJ55399.1| 666|Homo sapiens semaphorin 7A protein.
Length = 666
Score = 30.7 bits (66), Expect = 5.3
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +2
Query: 314 ISEEQVLPQGVPIKQMHVALTTEKLIVASGDIIKAVTLSHCGNVQS-CRECVSLQDPHCA 490
I E Q I+ M + KL V+S + V L C C C+ +DP+C
Sbjct: 453 IMEIQPFRCAAAIQTMSLDAERRKLYVSSQWEVSQVPLDLCEVYGGGCHGCLMSRDPYCG 512
Query: 491 WD 496
WD
Sbjct: 513 WD 514
>AK075388-1|BAC11588.1| 333|Homo sapiens protein ( Homo sapiens
cDNA PSEC0078 fis, clone NT2RP2004036, moderately
similar to M-Sema F=a factor in neural network
development. ).
Length = 333
Score = 30.3 bits (65), Expect = 7.1
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +2
Query: 446 QSCRECVSLQDPHCAW 493
+SC +CV +DP+CAW
Sbjct: 4 RSCADCVLARDPYCAW 19
>X53002-1|CAA37188.1| 799|Homo sapiens protein ( Human mRNA for
integrin beta-5 subunit. ).
Length = 799
Score = 29.9 bits (64), Expect = 9.3
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 437 GNVQSCRECVSLQDPHCAWDSKE 505
G+ SC EC+ + P CAW SKE
Sbjct: 31 GSATSCEECLLIH-PKCAWCSKE 52
>M35011-1|AAA52707.1| 796|Homo sapiens ITGB5 protein.
Length = 796
Score = 29.9 bits (64), Expect = 9.3
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 437 GNVQSCRECVSLQDPHCAWDSKE 505
G+ SC EC+ + P CAW SKE
Sbjct: 31 GSATSCEECLLIH-PKCAWCSKE 52
>J05633-1|AAA59183.1| 799|Homo sapiens ITGB5 protein.
Length = 799
Score = 29.9 bits (64), Expect = 9.3
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 437 GNVQSCRECVSLQDPHCAWDSKE 505
G+ SC EC+ + P CAW SKE
Sbjct: 31 GSATSCEECLLIH-PKCAWCSKE 52
>BC006541-1|AAH06541.1| 799|Homo sapiens integrin, beta 5 protein.
Length = 799
Score = 29.9 bits (64), Expect = 9.3
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 437 GNVQSCRECVSLQDPHCAWDSKE 505
G+ SC EC+ + P CAW SKE
Sbjct: 31 GSATSCEECLLIH-PKCAWCSKE 52
>AF026467-1|AAC05599.1| 85|Homo sapiens MHC class II antigen HLA
DR52 protein.
Length = 85
Score = 29.9 bits (64), Expect = 9.3
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -2
Query: 415 FNNITRSHYQFFSGQSNVHLFDRYTLRQNLFFR--NDCGPHR 296
F+ + +S FF+G V DRY Q F R +D G +R
Sbjct: 2 FSELRKSECHFFNGTERVRYLDRYFHNQEEFLRFDSDVGEYR 43
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,831,614
Number of Sequences: 237096
Number of extensions: 1917258
Number of successful extensions: 5054
Number of sequences better than 10.0: 145
Number of HSP's better than 10.0 without gapping: 4737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4982
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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