Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20682
(724 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 175 3e-44
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 175 3e-44
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 175 3e-44
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 163 1e-40
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 114 7e-26
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 114 7e-26
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 94 1e-19
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 67 1e-11
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 67 1e-11
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 65 6e-11
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 65 6e-11
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 65 6e-11
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 56 3e-08
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 40 0.002
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 38 0.005
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.16
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 33 0.27
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 33 0.27
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 1.1
Z82283-3|CAB05283.1| 485|Caenorhabditis elegans Hypothetical pr... 30 1.5
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 30 1.5
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 30 1.9
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 1.9
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.5
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.5
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.5
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.5
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 7.8
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 175 bits (425), Expect = 3e-44
Identities = 79/85 (92%), Positives = 84/85 (98%)
Frame = +3
Query: 3 EKFEKKAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFI 182
EKFEK+AQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFI
Sbjct: 40 EKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFI 99
Query: 183 KNMITGTSQADCAVLIVAAGTGEFK 257
KNMITGTSQADCAVL+VA GTGEF+
Sbjct: 100 KNMITGTSQADCAVLVVACGTGEFE 124
Score = 68.5 bits (160), Expect = 4e-12
Identities = 55/145 (37%), Positives = 70/145 (48%)
Frame = +2
Query: 254 QAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 433
+AGISKNGQTREHALLA TLGVKQL V+ T P S R + I++ + +
Sbjct: 124 EAGISKNGQTREHALLAQTLGVKQL---VSLRSPTRSPDSSRRSDTIQR-----LFHLSQ 175
Query: 434 NPAAVAFVPISGWHGDNMLEPSTKMLGSRDGRWSVKKAKLTENASLKLSMPSCHLPAPLT 613
+P + L GSRDG + +K L E S +L PS H A LT
Sbjct: 176 SPDSTE---------TTCLRSPRTCHGSRDGLLNARKETLPERPSSRLLTPSSHHNAQLT 226
Query: 614 SPCVFPCKTYTKSVVLVPCPSAELK 688
VF + T+S L P S L+
Sbjct: 227 DHSVFHSRMCTRSEELEPSQSDVLR 251
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 175 bits (425), Expect = 3e-44
Identities = 79/85 (92%), Positives = 84/85 (98%)
Frame = +3
Query: 3 EKFEKKAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFI 182
EKFEK+AQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFI
Sbjct: 40 EKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFI 99
Query: 183 KNMITGTSQADCAVLIVAAGTGEFK 257
KNMITGTSQADCAVL+VA GTGEF+
Sbjct: 100 KNMITGTSQADCAVLVVACGTGEFE 124
Score = 139 bits (337), Expect = 2e-33
Identities = 76/128 (59%), Positives = 90/128 (70%)
Frame = +2
Query: 254 QAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 433
+AGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGY
Sbjct: 124 EAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGY 183
Query: 434 NPAAVAFVPISGWHGDNMLEPSTKMLGSRDGRWSVKKAKLTENASLKLSMPSCHLPAPLT 613
NP AV FVPISG++GDNMLE S+ M + W+V++ + NAS K + + P
Sbjct: 184 NPKAVPFVPISGFNGDNMLEVSSNMPWFKG--WAVERKE--GNASGKTLLEALDSIIPPQ 239
Query: 614 SPCVFPCK 637
P P +
Sbjct: 240 RPTDRPLR 247
Score = 133 bits (322), Expect = 1e-31
Identities = 57/71 (80%), Positives = 64/71 (90%)
Frame = +1
Query: 511 WFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVET 690
WFKGW VERKEG A GK L+EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGRVET
Sbjct: 210 WFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVET 269
Query: 691 GVLKPGTIVVF 723
G++KPG +V F
Sbjct: 270 GIIKPGMVVTF 280
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 175 bits (425), Expect = 3e-44
Identities = 79/85 (92%), Positives = 84/85 (98%)
Frame = +3
Query: 3 EKFEKKAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFI 182
EKFEK+AQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFI
Sbjct: 40 EKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFI 99
Query: 183 KNMITGTSQADCAVLIVAAGTGEFK 257
KNMITGTSQADCAVL+VA GTGEF+
Sbjct: 100 KNMITGTSQADCAVLVVACGTGEFE 124
Score = 139 bits (337), Expect = 2e-33
Identities = 76/128 (59%), Positives = 90/128 (70%)
Frame = +2
Query: 254 QAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 433
+AGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKKIGY
Sbjct: 124 EAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGY 183
Query: 434 NPAAVAFVPISGWHGDNMLEPSTKMLGSRDGRWSVKKAKLTENASLKLSMPSCHLPAPLT 613
NP AV FVPISG++GDNMLE S+ M + W+V++ + NAS K + + P
Sbjct: 184 NPKAVPFVPISGFNGDNMLEVSSNMPWFKG--WAVERKE--GNASGKTLLEALDSIIPPQ 239
Query: 614 SPCVFPCK 637
P P +
Sbjct: 240 RPTDRPLR 247
Score = 133 bits (322), Expect = 1e-31
Identities = 57/71 (80%), Positives = 64/71 (90%)
Frame = +1
Query: 511 WFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVET 690
WFKGW VERKEG A GK L+EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGRVET
Sbjct: 210 WFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVET 269
Query: 691 GVLKPGTIVVF 723
G++KPG +V F
Sbjct: 270 GIIKPGMVVTF 280
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 163 bits (396), Expect = 1e-40
Identities = 74/78 (94%), Positives = 78/78 (100%)
Frame = +3
Query: 3 EKFEKKAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFI 182
EKFEK+AQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFI
Sbjct: 40 EKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFI 99
Query: 183 KNMITGTSQADCAVLIVA 236
KNMITGTSQADCAVL+VA
Sbjct: 100 KNMITGTSQADCAVLVVA 117
Score = 133 bits (322), Expect = 1e-31
Identities = 57/71 (80%), Positives = 64/71 (90%)
Frame = +1
Query: 511 WFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVET 690
WFKGW VERKEG A GK L+EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGRVET
Sbjct: 176 WFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVET 235
Query: 691 GVLKPGTIVVF 723
G++KPG +V F
Sbjct: 236 GIIKPGMVVTF 246
Score = 96.3 bits (229), Expect = 2e-20
Identities = 53/104 (50%), Positives = 67/104 (64%)
Frame = +2
Query: 326 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 505
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 506 MLGSRDGRWSVKKAKLTENASLKLSMPSCHLPAPLTSPCVFPCK 637
M + W+V++ + NAS K + + P P P +
Sbjct: 174 MPWFKG--WAVERKE--GNASGKTLLEALDSIIPPQRPTDRPLR 213
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 114 bits (274), Expect = 7e-26
Identities = 51/85 (60%), Positives = 65/85 (76%)
Frame = +3
Query: 3 EKFEKKAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFI 182
+KF+ +A GK SF YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+DFI
Sbjct: 203 DKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFI 262
Query: 183 KNMITGTSQADCAVLIVAAGTGEFK 257
NMITGTSQAD A+L+V A TGEF+
Sbjct: 263 SNMITGTSQADAAILVVNATTGEFE 287
Score = 70.9 bits (166), Expect = 8e-13
Identities = 35/81 (43%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Frame = +2
Query: 254 QAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIG 430
+ G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G
Sbjct: 287 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAG 344
Query: 431 YNPAAVAFVPISGWHGDNMLE 493
++ FVP+SG+ G+N+++
Sbjct: 345 FSKP--KFVPVSGFTGENLIK 363
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +1
Query: 553 DGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETG 693
DG CL+E +D+ + P P+D PLR+ + DV K+ V G++E+G
Sbjct: 371 DGPCLLELIDSFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKIESG 417
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 114 bits (274), Expect = 7e-26
Identities = 51/85 (60%), Positives = 65/85 (76%)
Frame = +3
Query: 3 EKFEKKAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFI 182
+KF+ +A GK SF YAWVLD+ + ERERG+T+DI FETS + ++DAPGH+DFI
Sbjct: 221 DKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFI 280
Query: 183 KNMITGTSQADCAVLIVAAGTGEFK 257
NMITGTSQAD A+L+V A TGEF+
Sbjct: 281 SNMITGTSQADAAILVVNATTGEFE 305
Score = 70.9 bits (166), Expect = 8e-13
Identities = 35/81 (43%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Frame = +2
Query: 254 QAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIG 430
+ G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G
Sbjct: 305 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAG 362
Query: 431 YNPAAVAFVPISGWHGDNMLE 493
++ FVP+SG+ G+N+++
Sbjct: 363 FSKP--KFVPVSGFTGENLIK 381
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +1
Query: 553 DGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETG 693
DG CL+E +D+ + P P+D PLR+ + DV K+ V G++E+G
Sbjct: 389 DGPCLLELIDSFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKIESG 435
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 93.9 bits (223), Expect = 1e-19
Identities = 40/85 (47%), Positives = 61/85 (71%)
Frame = +3
Query: 3 EKFEKKAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFI 182
EK+E++A+E G+ S+ +W +D ERE+G T+++ FET K + TI+DAPGH+ F+
Sbjct: 142 EKYEREAKEKGRESWYLSWCMDTNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFV 201
Query: 183 KNMITGTSQADCAVLIVAAGTGEFK 257
NMI G +QAD AVL+++A GEF+
Sbjct: 202 PNMIVGANQADLAVLVISARRGEFE 226
Score = 74.9 bits (176), Expect = 5e-14
Identities = 39/101 (38%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Frame = +2
Query: 233 SCRYR*IQAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 412
S R + G + GQTREH++L T GVK L++ VNKMD + E RF+EI+ +++
Sbjct: 219 SARRGEFETGFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTP 278
Query: 413 YIKKIGYNPAA-VAFVPISGWHGDNMLEPSTKMLGSRDGRW 532
+++K+G+NP + +VP SG G + + T GS +G W
Sbjct: 279 FLRKLGFNPKTDITYVPCSGLTGAFIKDRPT---GS-EGNW 315
Score = 36.3 bits (80), Expect = 0.022
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = +1
Query: 556 GKCLIEALDAILPP-ARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-TIVV 720
G C IE +D +LP R + P+R + + Y +GTV +G++E+G ++ G T+VV
Sbjct: 318 GPCFIEFIDVLLPSYKRDFNGPVRCTVAEKYS--EMGTVIIGKMESGCVQKGDTLVV 372
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 67.3 bits (157), Expect = 1e-11
Identities = 33/62 (53%), Positives = 43/62 (69%)
Frame = +3
Query: 63 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 242
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 243 TG 248
G
Sbjct: 143 DG 144
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +1
Query: 565 LIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 708
LI+ALD++ P R +P+ I G GTV VG +E GVLK G
Sbjct: 222 LIDALDSLPEPDRNEKDTFVMPIASKTAITGRGTVIVGTLERGVLKKG 269
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +2
Query: 278 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 457
QT+EH +LA +GVK + + +NK D E E + ++ E + G+N A +
Sbjct: 148 QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHGFNGDATPVI 203
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 67.3 bits (157), Expect = 1e-11
Identities = 33/62 (53%), Positives = 43/62 (69%)
Frame = +3
Query: 63 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 242
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 243 TG 248
G
Sbjct: 143 DG 144
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +1
Query: 565 LIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 708
LI+ALD++ P R +P+ I G GTV VG +E GVLK G
Sbjct: 222 LIDALDSLPEPDRNEKDTFVMPIASKTAITGRGTVIVGTLERGVLKKG 269
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +2
Query: 278 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 457
QT+EH +LA +GVK + + +NK D E E + ++ E + G+N A +
Sbjct: 148 QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLSLHGFNGDATPVI 203
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 64.9 bits (151), Expect = 6e-11
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +3
Query: 63 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 242
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 146
Query: 243 TG 248
G
Sbjct: 147 DG 148
Score = 36.7 bits (81), Expect = 0.017
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +1
Query: 544 GKADGKCLIEALDA--ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 708
G+ K L+E LD ++P + ++P+ + VY I G GTV G++E G+LK G
Sbjct: 226 GEEAVKQLLEVLDNKFVIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRG 281
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +2
Query: 278 QTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 433
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 152 QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 202
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 64.9 bits (151), Expect = 6e-11
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +3
Query: 63 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 242
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 243 TG 248
G
Sbjct: 148 DG 149
Score = 36.7 bits (81), Expect = 0.017
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +1
Query: 544 GKADGKCLIEALDA--ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 708
G+ K L+E LD ++P + ++P+ + VY I G GTV G++E G+LK G
Sbjct: 227 GEEAVKQLLEVLDNKFVIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRG 282
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +2
Query: 278 QTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 433
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 153 QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 203
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 64.9 bits (151), Expect = 6e-11
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +3
Query: 63 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 242
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 243 TG 248
G
Sbjct: 148 DG 149
Score = 36.7 bits (81), Expect = 0.017
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +1
Query: 544 GKADGKCLIEALDA--ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 708
G+ K L+E LD ++P + ++P+ + VY I G GTV G++E G+LK G
Sbjct: 227 GEEAVKQLLEVLDNKFVIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRG 282
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +2
Query: 278 QTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 433
QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + + GY
Sbjct: 153 QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGY 203
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 56.0 bits (129), Expect = 3e-08
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +3
Query: 3 EKFEKKAQEMGKGSFKYAWVLDKLKAER 86
EKFEK+AQEMGKGSFKYAWVLDKLK +
Sbjct: 40 EKFEKEAQEMGKGSFKYAWVLDKLKVTK 67
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +3
Query: 60 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 239
+LDKL+ ERERGIT+ Y + +ID PGH DF + + D +L+VAA
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAA 135
Query: 240 GTG 248
G
Sbjct: 136 NQG 138
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +3
Query: 60 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 239
V D L ERERGIT+ A + + + +ID PGH DF + D V+++
Sbjct: 64 VTDFLDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDG 123
Query: 240 GTG 248
G
Sbjct: 124 SAG 126
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +3
Query: 63 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 242
+D + ER+RGITI A + + IID PGH DF + D AVL++ G
Sbjct: 87 MDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CG 145
Query: 243 TG 248
G
Sbjct: 146 VG 147
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 38.3 bits (85), Expect = 0.005
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 33 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 209
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 210 ADCAVLIVAAGTG 248
AD VL+VAA G
Sbjct: 228 ADIVVLVVAADDG 240
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 33.5 bits (73), Expect = 0.16
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 63 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 233
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 33.5 bits (73), Expect = 0.16
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 63 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 233
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 32.7 bits (71), Expect = 0.27
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +3
Query: 66 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 230
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 231
Query: 231 VAAGTG 248
V A G
Sbjct: 232 VDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 32.7 bits (71), Expect = 0.27
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +3
Query: 66 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 230
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 106
Query: 231 VAAGTG 248
V A G
Sbjct: 107 VDAHEG 112
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 141 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 236
+V+ +D PGH + M+ G + D A L+VA
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>Z82283-3|CAB05283.1| 485|Caenorhabditis elegans Hypothetical
protein T23G4.3 protein.
Length = 485
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 350 DSTEPPYSEP-RFEEIKKEVSSYIKKIGYNPAAVAFV--PISGWHGDNMLEPSTKMLGSR 520
D TE + P +++E++KE+ + + + AA A P+ + L + K++ R
Sbjct: 78 DCTEGAEATPEQWKELEKELDKVVAFMKDSEAAKATETDPVKRYKNLCQLSMTLKIMSPR 137
Query: 521 DGRWSVKKAKLTENASLKL 577
DG W + K TE L +
Sbjct: 138 DGGWKILHDKRTEAEQLAI 156
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 99 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 248
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 29.9 bits (64), Expect = 1.9
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Frame = +2
Query: 251 IQAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG 430
+ AGI QT EH LLA ++I+ +NK D E + + E K+V +K +G
Sbjct: 105 VVAGIQP--QTAEHLLLASKFCPNRVIIVLNKCDLAE----KSKISESAKKVRKGLKSMG 158
Query: 431 Y--NPAAVAFVPISGWHGDNMLEPSTKMLGSR 520
N V G+ + ML+ + SR
Sbjct: 159 VDENSPIVEMSLADGYFKEEMLQNLKLAIESR 190
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +3
Query: 99 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 248
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 150 IIDAPGHRDFIKNMITGTSQADCAVLIV 233
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 408 PHTSRRLATTQLLSLSCPFLD 470
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 408 PHTSRRLATTQLLSLSCPFLD 470
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 408 PHTSRRLATTQLLSLSCPFLD 470
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 408 PHTSRRLATTQLLSLSCPFLD 470
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 7.8
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 144 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 239
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,554,592
Number of Sequences: 27780
Number of extensions: 414483
Number of successful extensions: 1345
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1340
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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