Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20682
(724 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 178 4e-47
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 175 5e-46
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 171 4e-45
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 171 4e-45
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 33 0.003
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 23 2.2
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.9
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 3.9
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 22 6.7
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 8.9
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 8.9
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 178 bits (434), Expect = 4e-47
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +3
Query: 3 EKFEKKAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFI 182
EKFEK+AQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFI
Sbjct: 40 EKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFI 99
Query: 183 KNMITGTSQADCAVLIVAAGTGEFK 257
KNMITGTSQADCAVLIVAAGTGEF+
Sbjct: 100 KNMITGTSQADCAVLIVAAGTGEFE 124
Score = 171 bits (417), Expect = 4e-45
Identities = 81/85 (95%), Positives = 83/85 (97%)
Frame = +2
Query: 254 QAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 433
+AGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKIGY
Sbjct: 124 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGY 183
Query: 434 NPAAVAFVPISGWHGDNMLEPSTKM 508
NPAAVAFVPISGWHGDNMLE S+KM
Sbjct: 184 NPAAVAFVPISGWHGDNMLEVSSKM 208
Score = 141 bits (341), Expect = 7e-36
Identities = 63/71 (88%), Positives = 65/71 (91%)
Frame = +1
Query: 511 WFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVET 690
WFKGW VERKEGK +GKCLIEALDAILPP RPTDK LRLPLQDVYKIGGIGTVPVGRVET
Sbjct: 210 WFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDKALRLPLQDVYKIGGIGTVPVGRVET 269
Query: 691 GVLKPGTIVVF 723
GVLKPG +V F
Sbjct: 270 GVLKPGMVVTF 280
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 175 bits (425), Expect = 5e-46
Identities = 81/85 (95%), Positives = 84/85 (98%)
Frame = +3
Query: 3 EKFEKKAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFI 182
EKFEK+AQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KYYVTIIDAPGHRDFI
Sbjct: 40 EKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFI 99
Query: 183 KNMITGTSQADCAVLIVAAGTGEFK 257
KNMITGTSQADCAVLIVAAG GEF+
Sbjct: 100 KNMITGTSQADCAVLIVAAGIGEFE 124
Score = 165 bits (400), Expect = 5e-43
Identities = 77/84 (91%), Positives = 80/84 (95%)
Frame = +2
Query: 254 QAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 433
+AGISKNGQTREHALLAFTLGVKQLIVGVNKMD T+PPYSE RFEEIKKEVSSYIKKIGY
Sbjct: 124 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKIGY 183
Query: 434 NPAAVAFVPISGWHGDNMLEPSTK 505
N A+VAFVPISGWHGDNMLEPS K
Sbjct: 184 NTASVAFVPISGWHGDNMLEPSPK 207
Score = 136 bits (329), Expect = 2e-34
Identities = 60/71 (84%), Positives = 66/71 (92%)
Frame = +1
Query: 511 WFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVET 690
W+KGW+VERK+G ADGK LIEALDAILPP+RPTDK LRLPLQDVYKIGGIGTVPVGRVET
Sbjct: 210 WYKGWKVERKDGNADGKTLIEALDAILPPSRPTDKALRLPLQDVYKIGGIGTVPVGRVET 269
Query: 691 GVLKPGTIVVF 723
G+LKPG +V F
Sbjct: 270 GILKPGMLVTF 280
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 171 bits (417), Expect = 4e-45
Identities = 81/85 (95%), Positives = 83/85 (97%)
Frame = +2
Query: 254 QAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 433
+AGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKIGY
Sbjct: 51 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGY 110
Query: 434 NPAAVAFVPISGWHGDNMLEPSTKM 508
NPAAVAFVPISGWHGDNMLE S+KM
Sbjct: 111 NPAAVAFVPISGWHGDNMLEVSSKM 135
Score = 109 bits (263), Expect = 2e-26
Identities = 50/51 (98%), Positives = 51/51 (100%)
Frame = +3
Query: 105 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFK 257
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF+
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 51
Score = 74.9 bits (176), Expect = 7e-16
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +1
Query: 511 WFKGWQVERKEGKADGKCLIEALDAILPPARPTDK 615
WFKGW VERKEGK +GKCLIEALDAILPP RPTDK
Sbjct: 137 WFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDK 171
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 171 bits (417), Expect = 4e-45
Identities = 81/85 (95%), Positives = 83/85 (97%)
Frame = +2
Query: 254 QAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 433
+AGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKIGY
Sbjct: 67 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGY 126
Query: 434 NPAAVAFVPISGWHGDNMLEPSTKM 508
NPAAVAFVPISGWHGDNMLE S+KM
Sbjct: 127 NPAAVAFVPISGWHGDNMLEVSSKM 151
Score = 142 bits (345), Expect = 2e-36
Identities = 66/67 (98%), Positives = 67/67 (100%)
Frame = +3
Query: 57 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 236
WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 237 AGTGEFK 257
AGTGEF+
Sbjct: 61 AGTGEFE 67
Score = 141 bits (341), Expect = 7e-36
Identities = 63/71 (88%), Positives = 65/71 (91%)
Frame = +1
Query: 511 WFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVET 690
WFKGW VERKEGK +GKCLIEALDAILPP RPTDK LRLPLQDVYKIGGIGTVPVGRVET
Sbjct: 153 WFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDKALRLPLQDVYKIGGIGTVPVGRVET 212
Query: 691 GVLKPGTIVVF 723
GVLKPG +V F
Sbjct: 213 GVLKPGMVVTF 223
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 33.1 bits (72), Expect = 0.003
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +3
Query: 144 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 248
VT +D PGH FI G D VL+VAA G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 23.4 bits (48), Expect = 2.2
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +3
Query: 3 EKFEKKAQEMGKGSFKYAWVLDKLKAERERGITIDIALW 119
E+ EK+ +E Y + LD ++E + T+D A++
Sbjct: 533 EEAEKRGKEYDAAGRTYLFDLDYNESEEQCPYTVDAAIY 571
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 129 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 230
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 3.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 129 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 230
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 21.8 bits (44), Expect = 6.7
Identities = 11/44 (25%), Positives = 20/44 (45%)
Frame = +1
Query: 394 QEGSILIHQEDWLQPSCCRFRAHFWMARRQHVGAFNQNAWFKGW 525
+E ++I D ++ +F + +WM R + QN K W
Sbjct: 324 EEKRMVIILPDGIRNYLTKFVSEYWMETRGFLQPVCQNEMNKWW 367
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.9
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -1
Query: 505 FG*RLQHVVSVPSRNGHESDSSWV 434
FG L H++ V +N + + WV
Sbjct: 35 FGLSLHHIIDVDEKNQILTTNCWV 58
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 8.9
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3
Query: 348 WIPLNHHTVSPDLRKSRRKY 407
W+P+N + S +L +R+Y
Sbjct: 443 WLPVNENYKSLNLAAQKREY 462
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,992
Number of Sequences: 438
Number of extensions: 4854
Number of successful extensions: 22
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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