Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20681
         (692 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    24   1.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.4  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   3.1  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   7.2  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   7.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   7.2  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   9.6  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   9.6  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   9.6  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   9.6  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +2

Query: 197 GHHKSPSCRSDGIPTPKCSWR 259
           G   +  C++DG P P  +W+
Sbjct: 713 GSDAAVECKADGFPRPVVTWK 733



 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +2

Query: 218 CRSDGIPTPKCSWRIRALRTLQKE 289
           C + G PTP+ +W +   R    E
Sbjct: 435 CIASGNPTPEITWELYGRRLSNSE 458



 Score = 22.2 bits (45), Expect = 4.1
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +2

Query: 218  CRSDGIPTPKCSWRIRALR 274
            C + G+P P  +W+I+ ++
Sbjct: 1328 CLAVGLPPPVITWKIKGVQ 1346


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -1

Query: 365  EACKVFHICIRVHVLHCKTWPQCRQTPSE 279
            E+C  F++C+  H++     P     P E
Sbjct: 1216 ESCSSFYVCVNGHLVPQNCAPGLHYNPEE 1244


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 303 RPSFTVKYMHSNAN 344
           +P FT KY H N N
Sbjct: 57  QPGFTGKYCHENIN 70


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -2

Query: 388 NKSSFFIKRLVKFFIFAFECMYFTVKLGLNVDK 290
           N SSF +  ++   I  +  + FT+ LG++  K
Sbjct: 99  NNSSFVVANVLFQLIHVYYTVVFTLLLGVDFVK 131


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -2

Query: 388 NKSSFFIKRLVKFFIFAFECMYFTVKLGLNVDK 290
           N SSF +  ++   I  +  + FT+ LG++  K
Sbjct: 99  NNSSFVVANVLFQLIHVYYTVVFTLLLGVDFVK 131


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -2

Query: 388 NKSSFFIKRLVKFFIFAFECMYFTVKLGLNVDK 290
           N SSF +  ++   I  +  + FT+ LG++  K
Sbjct: 419 NNSSFVVANVLFQLIHVYYTVVFTLLLGVDFVK 451


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 285 RSLSTLRPSFTVKYMH 332
           R + +LRP  T KY H
Sbjct: 281 RCIFSLRPGLTHKYTH 296


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 262 PRLENSSEGVCRH*GQVLQ*STCT 333
           P   N S+GVC   G V   S C+
Sbjct: 433 PESGNESDGVCTKEGIVRDPSDCS 456


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 536 WIPM*RVSQTFGTTYSGM 589
           W+ +  + Q  G  YSGM
Sbjct: 263 WVDLSHMMQQLGKAYSGM 280


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 536 WIPM*RVSQTFGTTYSGM 589
           W+ +  + Q  G  YSGM
Sbjct: 263 WVDLSHMMQQLGKAYSGM 280


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,231
Number of Sequences: 336
Number of extensions: 3178
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)