Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20680
         (722 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC008993-1|AAH08993.1|  275|Homo sapiens chromosome 9 open readi...    33   1.4  
AY598327-1|AAT06738.1|  275|Homo sapiens L8 protein.                   33   1.4  
AL353805-6|CAI12542.1|  275|Homo sapiens chromosome 9 open readi...    33   1.4  
AL353805-5|CAI12541.1|  181|Homo sapiens chromosome 9 open readi...    33   1.4  
AL353805-4|CAI12540.1|  159|Homo sapiens chromosome 9 open readi...    33   1.4  
AL353805-3|CAI12539.1|  134|Homo sapiens chromosome 9 open readi...    33   1.4  

>BC008993-1|AAH08993.1|  275|Homo sapiens chromosome 9 open reading
           frame 30 protein.
          Length = 275

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +2

Query: 254 MKEQAWQTLVNDFNSSIRRFPRTPSQLRLKWENLKNAT 367
           +K++ WQ L +++NS      R   QL+  WEN+K  T
Sbjct: 44  LKQRTWQALAHEYNSQPSVSLRDFKQLKKCWENIKART 81


>AY598327-1|AAT06738.1|  275|Homo sapiens L8 protein.
          Length = 275

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +2

Query: 254 MKEQAWQTLVNDFNSSIRRFPRTPSQLRLKWENLKNAT 367
           +K++ WQ L +++NS      R   QL+  WEN+K  T
Sbjct: 44  LKQRTWQALAHEYNSQPSVSLRDFKQLKKCWENIKART 81


>AL353805-6|CAI12542.1|  275|Homo sapiens chromosome 9 open reading
           frame 30 protein.
          Length = 275

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +2

Query: 254 MKEQAWQTLVNDFNSSIRRFPRTPSQLRLKWENLKNAT 367
           +K++ WQ L +++NS      R   QL+  WEN+K  T
Sbjct: 44  LKQRTWQALAHEYNSQPSVSLRDFKQLKKCWENIKART 81


>AL353805-5|CAI12541.1|  181|Homo sapiens chromosome 9 open reading
           frame 30 protein.
          Length = 181

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +2

Query: 254 MKEQAWQTLVNDFNSSIRRFPRTPSQLRLKWENLKNAT 367
           +K++ WQ L +++NS      R   QL+  WEN+K  T
Sbjct: 44  LKQRTWQALAHEYNSQPSVSLRDFKQLKKCWENIKART 81


>AL353805-4|CAI12540.1|  159|Homo sapiens chromosome 9 open reading
           frame 30 protein.
          Length = 159

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +2

Query: 254 MKEQAWQTLVNDFNSSIRRFPRTPSQLRLKWENLKNAT 367
           +K++ WQ L +++NS      R   QL+  WEN+K  T
Sbjct: 44  LKQRTWQALAHEYNSQPSVSLRDFKQLKKCWENIKART 81


>AL353805-3|CAI12539.1|  134|Homo sapiens chromosome 9 open reading
           frame 30 protein.
          Length = 134

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +2

Query: 254 MKEQAWQTLVNDFNSSIRRFPRTPSQLRLKWENLKNAT 367
           +K++ WQ L +++NS      R   QL+  WEN+K  T
Sbjct: 44  LKQRTWQALAHEYNSQPSVSLRDFKQLKKCWENIKART 81


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,255,889
Number of Sequences: 237096
Number of extensions: 1742249
Number of successful extensions: 2582
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2582
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)