Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20680
         (722 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr...    30   1.9  
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr...    30   1.9  
U23453-3|AAC46757.6|  297|Caenorhabditis elegans Hypothetical pr...    29   2.5  
U23453-2|AAV58891.1|  464|Caenorhabditis elegans Hypothetical pr...    29   2.5  
U23453-1|AAP86622.1|  484|Caenorhabditis elegans Hypothetical pr...    29   2.5  
AF022972-12|AAC48232.1|  363|Caenorhabditis elegans Seven tm rec...    29   2.5  
AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cycl...    29   3.4  
AC006644-6|AAZ91358.1|  958|Caenorhabditis elegans Hypothetical ...    29   4.4  

>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
           protein C18C4.5b protein.
          Length = 1046

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 15/40 (37%), Positives = 26/40 (65%)
 Frame = +2

Query: 281 VNDFNSSIRRFPRTPSQLRLKWENLKNATAT*ETTLVRLE 400
           +++ + ++R   +  SQLR + E LKNA +T E+TL  L+
Sbjct: 198 LSEMDRTLREEQQQKSQLRSQTETLKNALSTSESTLSMLK 237


>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
           protein C18C4.5a protein.
          Length = 1022

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 15/40 (37%), Positives = 26/40 (65%)
 Frame = +2

Query: 281 VNDFNSSIRRFPRTPSQLRLKWENLKNATAT*ETTLVRLE 400
           +++ + ++R   +  SQLR + E LKNA +T E+TL  L+
Sbjct: 198 LSEMDRTLREEQQQKSQLRSQTETLKNALSTSESTLSMLK 237


>U23453-3|AAC46757.6|  297|Caenorhabditis elegans Hypothetical
           protein B0252.3a protein.
          Length = 297

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -2

Query: 562 VSFWLLDILLMHCPYASLHFFSSILFP 482
           + FWLL    + C + S++ F+S +FP
Sbjct: 186 IHFWLLGKFAISCSFMSIYMFASEIFP 212


>U23453-2|AAV58891.1|  464|Caenorhabditis elegans Hypothetical
           protein B0252.3c protein.
          Length = 464

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -2

Query: 562 VSFWLLDILLMHCPYASLHFFSSILFP 482
           + FWLL    + C + S++ F+S +FP
Sbjct: 353 IHFWLLGKFAISCSFMSIYMFASEIFP 379


>U23453-1|AAP86622.1|  484|Caenorhabditis elegans Hypothetical
           protein B0252.3b protein.
          Length = 484

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -2

Query: 562 VSFWLLDILLMHCPYASLHFFSSILFP 482
           + FWLL    + C + S++ F+S +FP
Sbjct: 373 IHFWLLGKFAISCSFMSIYMFASEIFP 399


>AF022972-12|AAC48232.1|  363|Caenorhabditis elegans Seven tm
           receptor protein 204 protein.
          Length = 363

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 16/38 (42%), Positives = 24/38 (63%)
 Frame = -2

Query: 580 LYFPSQVSFWLLDILLMHCPYASLHFFSSILFPLGCIS 467
           LYF + V+  L+ I+LMH P ++L+F +     LG IS
Sbjct: 251 LYF-ALVTQTLIPIVLMHIPVSTLYFSAFFCIDLGSIS 287


>AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cyclase
           protein 2 protein.
          Length = 1080

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 16/58 (27%), Positives = 26/58 (44%)
 Frame = -2

Query: 535 LMHCPYASLHFFSSILFPLGCISVKNIICDLQQCFIQNFICNPYHLQPY*GCFLCCRS 362
           + +C   ++     +L+P    S K+I C+L  C +  F+C P        C L C S
Sbjct: 586 MFNCELPTIPASPKLLWPF---SRKSITCNLSDCVLLTFVCIPSAFANLLLCSLYCPS 640


>AC006644-6|AAZ91358.1|  958|Caenorhabditis elegans Hypothetical
           protein F55A3.1 protein.
          Length = 958

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = -2

Query: 583 FLYFPSQVSFWLLDILLMHCPYASLHFFSSIL-FPLGCISVKNIICDLQQCFIQ 425
           F YFP ++  W L ++ +H     + +F SI+   LG I +  I   + Q  +Q
Sbjct: 433 FAYFPFRIGNWFLSVIGLH---GKISYFPSIVAMLLGYIQIAIITYVIHQIMLQ 483


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,083,260
Number of Sequences: 27780
Number of extensions: 290405
Number of successful extensions: 703
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 703
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)