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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20679
         (783 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    27   0.13 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.6  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   4.8  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   6.4  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   8.4  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   8.4  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 16/57 (28%), Positives = 22/57 (38%)
 Frame = +3

Query: 138  SVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTVWCFCVAKSHPKLTWIIK 308
            ++GEG P K       A + A +    D          T+ C  V    P +TW IK
Sbjct: 1287 TIGEGQPSKKVTVSPSASVPAKIASFDDTFTTTYKEDVTLPCLAVGLPPPVITWKIK 1343


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -3

Query: 388  HHTACLVIKAFGRIIITNMFDRFAHNFLII 299
            HH    +IK+F  I    +   F  NFLII
Sbjct: 1308 HHHLSKLIKSFNEIYGVPLLLFFGLNFLII 1337


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 493 CITEHQALVSCPNFLVIS 440
           C+   Q L  CPN LV +
Sbjct: 48  CVNGQQELYDCPNGLVFA 65


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 257 YGFSYGFTCNFC 222
           +GF   FTCN C
Sbjct: 493 HGFHNPFTCNMC 504


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = -2

Query: 125 QKY*SIFHIITVSVGFRVSIHF*SLRHSEFRV 30
           QK+ ++   + +S+G  VSI+  S   +E  +
Sbjct: 32  QKFYAVAFFLALSIGVVVSIYSKSFHRNEIHI 63


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -2

Query: 251 FSYGFTCNFCVRILIQ 204
           + Y  TC FC+ +L +
Sbjct: 497 YLYRMTCLFCINVLAE 512


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,313
Number of Sequences: 336
Number of extensions: 4975
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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