Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20678
         (616 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...   150   3e-38
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    27   0.64 
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    27   0.64 
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    26   1.1  
AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside ...    25   2.6  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    24   3.4  

>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score =  150 bits (364), Expect = 3e-38
 Identities = 72/95 (75%), Positives = 83/95 (87%), Gaps = 1/95 (1%)
 Frame = +3

Query: 249 KEFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRI 428
           K+FSGKHVVF+ +R+ILPKP    R  NKQKRPRS  +T+VYDAILEDLVFPAE+VGKRI
Sbjct: 83  KKFSGKHVVFIAERRILPKPMRGRRDPNKQKRPRSPNVTAVYDAILEDLVFPAEVVGKRI 142

Query: 429 RVKLDGSQLIKVHLDKNQQTTIEHKVEP-SSLYTR 530
           RVKLDGSQLIKVHLDKNQQTTIEHKV+  +S+Y +
Sbjct: 143 RVKLDGSQLIKVHLDKNQQTTIEHKVDTFASVYKK 177



 Score =  119 bits (287), Expect = 7e-29
 Identities = 55/79 (69%), Positives = 68/79 (86%)
 Frame = +1

Query: 16  TKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPM 195
           +K+IKA   E D+FET I QA++ELE NSDLK QLR+LYIT+A+E+E +NKK+IIIYVP+
Sbjct: 5   SKVIKAGNGEPDAFETQIGQAILELEMNSDLKPQLRDLYITRAREVEFNNKKAIIIYVPV 64

Query: 196 PKLKAFQKIQIRLVRELEK 252
           PK KAFQK+Q RLVRELEK
Sbjct: 65  PKQKAFQKVQTRLVRELEK 83



 Score = 46.0 bits (104), Expect = 1e-06
 Identities = 20/23 (86%), Positives = 21/23 (91%)
 Frame = +2

Query: 509 TFQSVYKKLTGREVTFEFPEPYL 577
           TF SVYKKLTGR+VTFEFPE YL
Sbjct: 170 TFASVYKKLTGRDVTFEFPENYL 192


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 20/52 (38%), Positives = 31/52 (59%)
 Frame = +3

Query: 360 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVEPS 515
           L S Y+ ++  +V  ++++  R+ +KL  SQLI V+L KNQ  T    VE S
Sbjct: 35  LLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNL-KNQIMTTNLWVEQS 83


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 20/52 (38%), Positives = 31/52 (59%)
 Frame = +3

Query: 360 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVEPS 515
           L S Y+ ++  +V  ++++  R+ +KL  SQLI V+L KNQ  T    VE S
Sbjct: 35  LLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNL-KNQIMTTNLWVEQS 83


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -2

Query: 594 VIG*VYK*GSGNSKVTSRPVSFLYTDWKV 508
           VI  V K G G++  + RP+S L TD+K+
Sbjct: 503 VIVLVRKKGGGDAMSSIRPISLLNTDYKL 531


>AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside
           phosphorylase protein.
          Length = 353

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +1

Query: 511 LPVCIQEANGTRSDLRVPRTLFVNLAYD 594
           LPV  Q+   T     +PRT  V   YD
Sbjct: 46  LPVAYQQKAATSGPFHMPRTEHVGYTYD 73


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -1

Query: 442 SNLTLMRLPTISAGKTKSSRIASYTEVNVLERGLFCLLATRVLWLGLGRIL 290
           +N  L+ +P  +   T SSR       +     L CLLAT V+W   G++L
Sbjct: 54  ANSRLVTVPAPAKELTDSSRSGGLPSSSS-SSSLSCLLATIVMWC-TGQVL 102


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,055
Number of Sequences: 2352
Number of extensions: 13306
Number of successful extensions: 40
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)