Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20676
         (733 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.5  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   3.4  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   4.4  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    22   4.4  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    22   4.4  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   5.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   7.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -3

Query: 716 KFNALTSRGAGGREGSHRLST 654
           K   L S G G R+GSHR ST
Sbjct: 247 KLKVLISVGEG-RDGSHRFST 266


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 160 IIKIAVPLAAGSRRSVPPPAPRLPVC 237
           +I + + L  G+   +PP  P  P C
Sbjct: 678 VIGMNLVLQVGTHADLPPVPPNFPTC 703


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 241 NYKLGDEARGAGHSDATPPQGGLL 170
           N KLG   +GAG+S     + G+L
Sbjct: 274 NAKLGAPVKGAGNSGKYTGEAGML 297


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 396 CY*NFSDWTVYKETHAKY 449
           CY  F+ WT+Y+  + K+
Sbjct: 25  CY--FTSWTIYRPDNGKF 40


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 396 CY*NFSDWTVYKETHAKY 449
           CY  F+ WT+Y+  + K+
Sbjct: 26  CY--FASWTIYRPDNGKF 41


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 396 CY*NFSDWTVYKETHAKY 449
           CY  F+ WT+Y+  + K+
Sbjct: 26  CY--FASWTIYRPDNGKF 41


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = -3

Query: 416 VTKILITISCVSLSLYQKINKIKMNYISMLLSSIQGTIGMLFN 288
           V   L+T S +S+  Y++    K++    +++ + GTI   F+
Sbjct: 35  VVTALVTPSALSIIYYRQPIYAKISETKSIVAMVMGTIVNAFS 77


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/16 (37%), Positives = 8/16 (50%)
 Frame = +3

Query: 183 CGGVASECPAPRASSP 230
           C  + +ECP P    P
Sbjct: 82  CRSIKNECPEPTCDEP 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,655
Number of Sequences: 336
Number of extensions: 3133
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)