Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20674
         (796 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    27   0.13 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           24   1.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.1  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   6.5  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 13/26 (50%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = -2

Query: 453 VVKSFEPNDG*RQ-GGKVQSQICRSF 379
           +VKSF+  D   Q GGKV++ IC++F
Sbjct: 504 LVKSFDAIDSKLQTGGKVETSICKNF 529


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 535 ARHWRGTKQERNRRSEDPNFEFGKGTFKREERQRSCK 645
           A+HW G  Q++ R  ED   +F + T+   +RQR  +
Sbjct: 192 AKHWTGIFQKKWRGYEDFRRDFLR-TYWSAKRQRDIR 227


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
 Frame = +3

Query: 165 QSEQMAEVLQIEISSLHKRAGIYLFSDSHWVLVLCLLDAIREMQKYSN----IEPSDHQH 332
           QSEQ+A +  + I  +    GI   +D  ++  +C    I E+ K       IE +DH+ 
Sbjct: 623 QSEQIAWLHLLYIFLV----GIMYAADVFYICHVCC-STIHEVSKAGELIHKIETNDHEI 677

Query: 333 LDAEMQGNMRLFRAQRNFYISGF 401
           +D     ++++   +  F  +GF
Sbjct: 678 IDKIEMFSLQILNERAGFSAAGF 700


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 12/65 (18%), Positives = 26/65 (40%)
 Frame = -2

Query: 420 RQGGKVQSQICRSFSVHETISCYLAFRRRDAGGLTVQYLNIFASHELHLADIILAPNENQ 241
           R+G    S++ +S   H+   C+L  R   +    +  L       + L  +I +  ++ 
Sbjct: 117 REGMNSLSRVLKSIEKHQGAVCHLETRPNQSDNNQLDALVKVEMTRVSLLQLIKSLRQSS 176

Query: 240 KINRC 226
            +  C
Sbjct: 177 SLEHC 181


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,527
Number of Sequences: 336
Number of extensions: 3375
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21583952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)