Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20674
         (796 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        24   4.7  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   8.2  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   8.2  
AJ438610-5|CAD27477.1|  135|Anopheles gambiae hypothetical prote...    23   8.2  

>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 154 KLKGGRLRSRYRETSR*LSIAD 89
           ++ GGR R RY + +  L+IAD
Sbjct: 90  EMNGGRRRKRYADGANLLTIAD 111


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 11/45 (24%), Positives = 25/45 (55%)
 Frame = +2

Query: 641  VKSQAEGLNKEYDRLAEEHSKLQKKLTVSGEGDSKKDE*ILTLQN 775
            ++++  GL K+ D+L+   SKL  ++  S     K  + I ++++
Sbjct: 898  LQTKINGLGKQIDKLSANISKLTVEIKTSERNVQKSKDKINSMED 942


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
 Frame = +3

Query: 96  MDNYRDVSLYRDRSRPPFNFADSQSEQMAEVLQIEISSLHKRA---GIYLFSDSHWVLVL 266
           MDNYR++  ++   RP  +     S    E ++    ++H+ A   G   F     VL+ 
Sbjct: 140 MDNYRNILSFQGNQRPTLDELHDASITNKETMR--RGTVHEPAELDGSIKFGWIKGVLMR 197

Query: 267 CLLD 278
           CLL+
Sbjct: 198 CLLN 201


>AJ438610-5|CAD27477.1|  135|Anopheles gambiae hypothetical protein
           protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = -2

Query: 147 KEDDCDLGIEKRRDNCPLQTHDFTIFLTPLLTIQCSKR*WTNNKL 13
           K+D  D+     +DN P   +  TI L P+    C+ +   NN +
Sbjct: 87  KQDKKDITFSTTQDNFPTPHNRITIVLLPIF---CAPKSEVNNTI 128


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 727,824
Number of Sequences: 2352
Number of extensions: 13098
Number of successful extensions: 30
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83576403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)