Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20674
         (796 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069750-1|AAL39895.1|  228|Drosophila melanogaster LP10861p pro...   119   5e-27
AE014296-144|AAN11453.1|  228|Drosophila melanogaster CG13887-PC...   119   5e-27
AE014296-143|AAF47419.1|  228|Drosophila melanogaster CG13887-PB...   119   5e-27

>AY069750-1|AAL39895.1|  228|Drosophila melanogaster LP10861p
           protein.
          Length = 228

 Score =  119 bits (286), Expect = 5e-27
 Identities = 62/103 (60%), Positives = 81/103 (78%)
 Frame = +3

Query: 201 ISSLHKRAGIYLFSDSHWVLVLCLLDAIREMQKYSNIEPSDHQHLDAEMQGNMRLFRAQR 380
           +S L ++A IY F     +LV+ LL+AIREM+KYS ++ S+  HL+ EMQ +M+LFRAQR
Sbjct: 41  LSMLGQQAHIY-FLLIMGILVIFLLEAIREMRKYSGLQQSNEVHLNVEMQHSMKLFRAQR 99

Query: 381 NFYISGFALFLLVVIRRLVQMISQLATLLAQSEANFRQAQSAT 509
           NFYISGFA+FL +VIRRLV +I   A L+AQSEA+F+QAQSAT
Sbjct: 100 NFYISGFAIFLALVIRRLVNLICTQANLMAQSEASFKQAQSAT 142



 Score = 82.6 bits (195), Expect = 6e-16
 Identities = 36/57 (63%), Positives = 46/57 (80%)
 Frame = +1

Query: 85  MSLQWTIIATFLYTEIAVVLLLTLPIASPSRWQKFFKSKFLAYISGQASIYFLILIG 255
           MSL WT+IA FLY EIA+VLLL LP+ +P RW +FFKSKFL+ +  QA IYFL+++G
Sbjct: 1   MSLVWTLIAGFLYAEIALVLLLVLPVLTPYRWNRFFKSKFLSMLGQQAHIYFLLIMG 57



 Score = 63.7 bits (148), Expect = 3e-10
 Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
 Frame = +2

Query: 515 ARTLLEKQGT------GEEQSKKEIEDLRTQIXXXXXXXXXXXXXXXAVKSQAEGLNKEY 676
           AR+LLE + T      GE+ +  E+  LR ++               AVKSQAE +N+EY
Sbjct: 145 ARSLLENKNTEKAKEAGEDTTLIELNKLRERVQELTSDLNREKKDKEAVKSQAESINREY 204

Query: 677 DRLAEEHSKLQKKLTVSGEGD 739
           DRL EE+SKLQKK+T+ G G+
Sbjct: 205 DRLTEEYSKLQKKITIGGGGN 225


>AE014296-144|AAN11453.1|  228|Drosophila melanogaster CG13887-PC,
           isoform C protein.
          Length = 228

 Score =  119 bits (286), Expect = 5e-27
 Identities = 62/103 (60%), Positives = 81/103 (78%)
 Frame = +3

Query: 201 ISSLHKRAGIYLFSDSHWVLVLCLLDAIREMQKYSNIEPSDHQHLDAEMQGNMRLFRAQR 380
           +S L ++A IY F     +LV+ LL+AIREM+KYS ++ S+  HL+ EMQ +M+LFRAQR
Sbjct: 41  LSMLGQQAHIY-FLLIMGILVIFLLEAIREMRKYSGLQQSNEVHLNVEMQHSMKLFRAQR 99

Query: 381 NFYISGFALFLLVVIRRLVQMISQLATLLAQSEANFRQAQSAT 509
           NFYISGFA+FL +VIRRLV +I   A L+AQSEA+F+QAQSAT
Sbjct: 100 NFYISGFAIFLALVIRRLVNLICTQANLMAQSEASFKQAQSAT 142



 Score = 82.6 bits (195), Expect = 6e-16
 Identities = 36/57 (63%), Positives = 46/57 (80%)
 Frame = +1

Query: 85  MSLQWTIIATFLYTEIAVVLLLTLPIASPSRWQKFFKSKFLAYISGQASIYFLILIG 255
           MSL WT+IA FLY EIA+VLLL LP+ +P RW +FFKSKFL+ +  QA IYFL+++G
Sbjct: 1   MSLVWTLIAGFLYAEIALVLLLVLPVLTPYRWNRFFKSKFLSMLGQQAHIYFLLIMG 57



 Score = 63.7 bits (148), Expect = 3e-10
 Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
 Frame = +2

Query: 515 ARTLLEKQGT------GEEQSKKEIEDLRTQIXXXXXXXXXXXXXXXAVKSQAEGLNKEY 676
           AR+LLE + T      GE+ +  E+  LR ++               AVKSQAE +N+EY
Sbjct: 145 ARSLLENKNTEKAKEAGEDTTLIELNKLRERVQELTSDLNREKKDKEAVKSQAESINREY 204

Query: 677 DRLAEEHSKLQKKLTVSGEGD 739
           DRL EE+SKLQKK+T+ G G+
Sbjct: 205 DRLTEEYSKLQKKITIGGGGN 225


>AE014296-143|AAF47419.1|  228|Drosophila melanogaster CG13887-PB,
           isoform B protein.
          Length = 228

 Score =  119 bits (286), Expect = 5e-27
 Identities = 62/103 (60%), Positives = 81/103 (78%)
 Frame = +3

Query: 201 ISSLHKRAGIYLFSDSHWVLVLCLLDAIREMQKYSNIEPSDHQHLDAEMQGNMRLFRAQR 380
           +S L ++A IY F     +LV+ LL+AIREM+KYS ++ S+  HL+ EMQ +M+LFRAQR
Sbjct: 41  LSMLGQQAHIY-FLLIMGILVIFLLEAIREMRKYSGLQQSNEVHLNVEMQHSMKLFRAQR 99

Query: 381 NFYISGFALFLLVVIRRLVQMISQLATLLAQSEANFRQAQSAT 509
           NFYISGFA+FL +VIRRLV +I   A L+AQSEA+F+QAQSAT
Sbjct: 100 NFYISGFAIFLALVIRRLVNLICTQANLMAQSEASFKQAQSAT 142



 Score = 82.6 bits (195), Expect = 6e-16
 Identities = 36/57 (63%), Positives = 46/57 (80%)
 Frame = +1

Query: 85  MSLQWTIIATFLYTEIAVVLLLTLPIASPSRWQKFFKSKFLAYISGQASIYFLILIG 255
           MSL WT+IA FLY EIA+VLLL LP+ +P RW +FFKSKFL+ +  QA IYFL+++G
Sbjct: 1   MSLVWTLIAGFLYAEIALVLLLVLPVLTPYRWNRFFKSKFLSMLGQQAHIYFLLIMG 57



 Score = 63.7 bits (148), Expect = 3e-10
 Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
 Frame = +2

Query: 515 ARTLLEKQGT------GEEQSKKEIEDLRTQIXXXXXXXXXXXXXXXAVKSQAEGLNKEY 676
           AR+LLE + T      GE+ +  E+  LR ++               AVKSQAE +N+EY
Sbjct: 145 ARSLLENKNTEKAKEAGEDTTLIELNKLRERVQELTSDLNREKKDKEAVKSQAESINREY 204

Query: 677 DRLAEEHSKLQKKLTVSGEGD 739
           DRL EE+SKLQKK+T+ G G+
Sbjct: 205 DRLTEEYSKLQKKITIGGGGN 225


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,504,933
Number of Sequences: 53049
Number of extensions: 619935
Number of successful extensions: 1537
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1537
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)