Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20671
(493 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P55072 Cluster: Transitional endoplasmic reticulum ATPa... 158 7e-38
UniRef50_A4ICJ9 Cluster: Transitional endoplasmic reticulum ATPa... 127 2e-28
UniRef50_Q4Y788 Cluster: Cell division cycle protein 48 homologu... 116 3e-25
UniRef50_UPI0000E4A84B Cluster: PREDICTED: similar to valosin; n... 107 2e-22
UniRef50_A0EEE7 Cluster: Chromosome undetermined scaffold_91, wh... 72 8e-12
UniRef50_Q7QWL6 Cluster: GLP_762_31096_33708; n=1; Giardia lambl... 57 2e-07
UniRef50_Q4YQQ6 Cluster: Cell division cycle ATPase, putative; n... 48 2e-04
UniRef50_Q5CJ12 Cluster: Putative uncharacterized protein; n=2; ... 47 3e-04
UniRef50_A5KAB5 Cluster: Cell division cycle ATPase, putative; n... 47 3e-04
UniRef50_A7AVE1 Cluster: Cell division cycle protein ATPase, put... 40 0.040
UniRef50_Q8IJW9 Cluster: Putative uncharacterized protein; n=3; ... 39 0.070
UniRef50_Q1JSD1 Cluster: Transitional endoplasmic reticulum ATPa... 38 0.12
UniRef50_A2FWK7 Cluster: ATPase, AAA family protein; n=1; Tricho... 38 0.12
UniRef50_A2FTG5 Cluster: ATPase, AAA family protein; n=1; Tricho... 38 0.12
UniRef50_A2QZY1 Cluster: Remark: Cdc48p of S. cerevisiae is more... 38 0.12
UniRef50_A5K794 Cluster: Putative uncharacterized protein; n=1; ... 36 0.37
UniRef50_Q7QTA1 Cluster: GLP_15_26945_31573; n=3; root|Rep: GLP_... 35 1.1
UniRef50_Q7RTI8 Cluster: Putative uncharacterized protein PY0000... 34 1.5
UniRef50_A4A8Q6 Cluster: Putative uncharacterized protein; n=1; ... 34 2.0
UniRef50_Q5CYT2 Cluster: 3CCCH domain containing protein; n=2; C... 33 3.5
UniRef50_Q1YDJ6 Cluster: Putative uncharacterized protein; n=1; ... 33 4.6
UniRef50_Q4MZM6 Cluster: Cell division cycle protein 48, putativ... 33 4.6
UniRef50_Q09AB1 Cluster: Putative uncharacterized protein; n=1; ... 32 8.0
UniRef50_Q4UBT9 Cluster: Cell divison cycle CDC48 homologue, put... 32 8.0
UniRef50_Q4E0K4 Cluster: Ubiquitin hydrolase, putative; n=3; Try... 32 8.0
>UniRef50_P55072 Cluster: Transitional endoplasmic reticulum ATPase
(TER ATPase) (15S Mg(2+)- ATPase p97 subunit); n=169;
Eukaryota|Rep: Transitional endoplasmic reticulum ATPase
(TER ATPase) (15S Mg(2+)- ATPase p97 subunit) - Homo
sapiens (Human)
Length = 806
Score = 158 bits (383), Expect = 7e-38
Identities = 67/79 (84%), Positives = 76/79 (96%)
Frame = +2
Query: 257 GKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDP 436
GKR+H+LPIDD+VEG+TGNLFEVYLKPYF+EAYRPI + D F+VRGGMRAVEFKVVETDP
Sbjct: 111 GKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDP 170
Query: 437 SPFCIVAPDTVIHCDGEPI 493
SP+CIVAPDTVIHC+GEPI
Sbjct: 171 SPYCIVAPDTVIHCEGEPI 189
Score = 117 bits (282), Expect = 1e-25
Identities = 55/84 (65%), Positives = 65/84 (77%)
Frame = +3
Query: 3 LIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMX 182
LIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCIVLSDD C DEKIRM
Sbjct: 26 LIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMN 85
Query: 183 XXXXXXXXXXXSDVVSIAPCPSVK 254
DV+SI PCP VK
Sbjct: 86 RVVRNNLRVRLGDVISIQPCPDVK 109
>UniRef50_A4ICJ9 Cluster: Transitional endoplasmic reticulum ATPase,
putative; n=2; Leishmania|Rep: Transitional endoplasmic
reticulum ATPase, putative - Leishmania infantum
Length = 690
Score = 127 bits (306), Expect = 2e-28
Identities = 52/79 (65%), Positives = 68/79 (86%)
Frame = +2
Query: 257 GKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDP 436
G RVH+LPIDD+VE LTG+LFE +LKPYF+E+YRP+ + D+F+ RG MR+VEFKVVE DP
Sbjct: 102 GNRVHLLPIDDTVENLTGDLFENFLKPYFLESYRPVKKGDSFVCRGAMRSVEFKVVEVDP 161
Query: 437 SPFCIVAPDTVIHCDGEPI 493
+CIV+PDT+IH +G+PI
Sbjct: 162 GDYCIVSPDTIIHSEGDPI 180
Score = 94.7 bits (225), Expect = 1e-18
Identities = 43/87 (49%), Positives = 55/87 (63%)
Frame = +3
Query: 3 LIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMX 182
LIVEE +DDNSVV+L+ +ME+L +FRGDTVL+KGK+ + TVCI + DD CP EKI+M
Sbjct: 17 LIVEEPYNDDNSVVSLNPKRMEELNIFRGDTVLVKGKKHRSTVCIAMEDDECPPEKIKMN 76
Query: 183 XXXXXXXXXXXSDVVSIAPCPSVKMEN 263
D + I PC V N
Sbjct: 77 KVARRNIRIHLGDTIRIVPCKDVPYGN 103
>UniRef50_Q4Y788 Cluster: Cell division cycle protein 48 homologue,
putative; n=4; Plasmodium|Rep: Cell division cycle
protein 48 homologue, putative - Plasmodium chabaudi
Length = 250
Score = 116 bits (279), Expect = 3e-25
Identities = 49/80 (61%), Positives = 66/80 (82%), Gaps = 1/80 (1%)
Frame = +2
Query: 257 GKRVHILPIDDSVEGLTGN-LFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETD 433
GK++ +LPIDD++EGL + LFE++LKPYF E+YRP+ + D F+VRGG +VEFKVVE D
Sbjct: 112 GKKIQVLPIDDTIEGLAKDTLFEIFLKPYFNESYRPVKKGDLFLVRGGFMSVEFKVVEVD 171
Query: 434 PSPFCIVAPDTVIHCDGEPI 493
P FCIV+PDTVI+ +G+PI
Sbjct: 172 PDDFCIVSPDTVIYYEGDPI 191
Score = 88.6 bits (210), Expect = 7e-17
Identities = 39/83 (46%), Positives = 56/83 (67%)
Frame = +3
Query: 3 LIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMX 182
LIVEEA +DDNSVVAL+ +ME+L FRGDT+L+KGK+R T+CI+L+D++ + KIR+
Sbjct: 27 LIVEEATNDDNSVVALNTKRMEELNFFRGDTILIKGKKRHSTICIILNDNDLDEGKIRIN 86
Query: 183 XXXXXXXXXXXSDVVSIAPCPSV 251
D+V + CP +
Sbjct: 87 KVARKNLRVCLGDIVYVKACPEI 109
>UniRef50_UPI0000E4A84B Cluster: PREDICTED: similar to valosin; n=3;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
valosin - Strongylocentrotus purpuratus
Length = 596
Score = 107 bits (256), Expect = 2e-22
Identities = 44/61 (72%), Positives = 53/61 (86%)
Frame = +2
Query: 311 NLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEP 490
NLF+VYL+PYF EAYRP+ + D F +RGGMRAVEFKVVETDP P+CIV+PDTVIH +G+
Sbjct: 99 NLFDVYLRPYFQEAYRPVRKGDIFQIRGGMRAVEFKVVETDPGPYCIVSPDTVIHFEGDA 158
Query: 491 I 493
I
Sbjct: 159 I 159
Score = 99.5 bits (237), Expect = 4e-20
Identities = 46/75 (61%), Positives = 59/75 (78%)
Frame = +3
Query: 3 LIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMX 182
L+VEEA++DDNSVV+LSQAKM++LQLFRGDTV+LKGK+R++TVCIVLSDD D+KIR+
Sbjct: 23 LVVEEAINDDNSVVSLSQAKMDELQLFRGDTVMLKGKKRRDTVCIVLSDDTVTDDKIRVN 82
Query: 183 XXXXXXXXXXXSDVV 227
D+V
Sbjct: 83 RVVRSNLRVRLGDIV 97
>UniRef50_A0EEE7 Cluster: Chromosome undetermined scaffold_91, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_91,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 772
Score = 71.7 bits (168), Expect = 8e-12
Identities = 31/75 (41%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Frame = +2
Query: 263 RVHILPIDDSVEGLTG-NLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPS 439
+VHILP DS+ G NL + YL PYF++AYRP+ + D F+V+ + +EFK++ T+P
Sbjct: 105 KVHILPFQDSISGTNEKNLTQNYLIPYFLDAYRPVSKGDCFVVKMA-KEIEFKIIATEPE 163
Query: 440 PFCIVAPDTVIHCDG 484
+V P T+++ +G
Sbjct: 164 DMGVVGPITILYTEG 178
Score = 61.3 bits (142), Expect = 1e-08
Identities = 33/83 (39%), Positives = 48/83 (57%)
Frame = +3
Query: 3 LIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMX 182
L+V E+ +DDNSVV L Q K+ +L+LF+GD VLL+GK K+TV I +S+ E + M
Sbjct: 19 LMVCESTADDNSVVQLCQDKLNELKLFKGDMVLLEGKNNKKTVAIAISNRQ-DKESVHMN 77
Query: 183 XXXXXXXXXXXSDVVSIAPCPSV 251
D ++I P S+
Sbjct: 78 SVIRKNLGIQIGDFITIQPTASL 100
>UniRef50_Q7QWL6 Cluster: GLP_762_31096_33708; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_762_31096_33708 - Giardia lamblia
ATCC 50803
Length = 870
Score = 57.2 bits (132), Expect = 2e-07
Identities = 31/69 (44%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Frame = +2
Query: 299 GLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGM----RAVEFKVVETDPSPFCIVAPDT 466
G T +LF++ + PYF + RP+ +TF V R +EFKVV TDPSP CIV
Sbjct: 136 GPTYDLFDICIAPYFKDKCRPVTEGNTFKVMTTSLPVNREIEFKVVLTDPSPACIVMDGG 195
Query: 467 VIHCDGEPI 493
I +GEPI
Sbjct: 196 EIFYEGEPI 204
Score = 38.3 bits (85), Expect = 0.092
Identities = 24/82 (29%), Positives = 38/82 (46%)
Frame = +3
Query: 6 IVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMXX 185
IV + D+S + LS K+ L LF+GD V LKG+ K T +V S ++ + M
Sbjct: 15 IVNDNPGGDDSQIILSSEKVNVLDLFQGDYVRLKGRFGKTTHAMVQSREDVDKIVVLMNK 74
Query: 186 XXXXXXXXXXSDVVSIAPCPSV 251
D+V + P ++
Sbjct: 75 TMRANLGVNLGDIVILYPAQNL 96
>UniRef50_Q4YQQ6 Cluster: Cell division cycle ATPase, putative; n=3;
Plasmodium (Vinckeia)|Rep: Cell division cycle ATPase,
putative - Plasmodium berghei
Length = 932
Score = 47.6 bits (108), Expect = 2e-04
Identities = 24/75 (32%), Positives = 40/75 (53%)
Frame = +3
Query: 30 DNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXX 209
DN + +S+ KM++L + G TVLLKGK++KE V IV D+ + +
Sbjct: 114 DNFDIYMSKEKMKELNINDGFTVLLKGKKKKEMVAIVREDNRLNKYSVSISFSIKRNLRL 173
Query: 210 XXSDVVSIAPCPSVK 254
+D++ I P ++K
Sbjct: 174 MHNDIIKIYPLSNIK 188
Score = 33.1 bits (72), Expect = 3.5
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 251 ENGKRVHILPIDDSVEGLTGNLFEV-YLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVE 427
+N K V + P +D+V +T E L Y +Y+P+ D+T + + +E KV++
Sbjct: 188 KNIKNVILSPFNDTVNNITKQEIEKEILNTYLKNSYKPLSVDNTIYINYKNKRIELKVLK 247
>UniRef50_Q5CJ12 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium hominis
Length = 413
Score = 46.8 bits (106), Expect = 3e-04
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Frame = +2
Query: 260 KRVHILPIDDSV-EGLTGNLFEVYLKPYFME-AYRPIHRDDTFMVRGGMRAVEFKVVETD 433
KR+H++P D++ + + ++F+ YLKP+ + P ++F G V+FK++ TD
Sbjct: 202 KRIHVMPFSDTLPQTYSFDIFQDYLKPFLSRYTFHPFSEGESFTYNG----VQFKIIATD 257
Query: 434 PSPF-CIVAPDTVIHCDG 484
P+ + +T I+C G
Sbjct: 258 PAGVKARIGDNTTIYCQG 275
>UniRef50_A5KAB5 Cluster: Cell division cycle ATPase, putative; n=1;
Plasmodium vivax|Rep: Cell division cycle ATPase,
putative - Plasmodium vivax
Length = 1089
Score = 46.8 bits (106), Expect = 3e-04
Identities = 26/74 (35%), Positives = 37/74 (50%)
Frame = +3
Query: 30 DNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXX 209
DN + LS+AKME+L L G TVLLKGK++KE + I D + +
Sbjct: 283 DNCEIYLSKAKMEELNLSEGFTVLLKGKKKKEMLAIAKLDRRLQKHFVVISFAMKKNLRL 342
Query: 210 XXSDVVSIAPCPSV 251
+D++ I P V
Sbjct: 343 MHNDIIKIFPLMKV 356
>UniRef50_A7AVE1 Cluster: Cell division cycle protein ATPase,
putative; n=1; Babesia bovis|Rep: Cell division cycle
protein ATPase, putative - Babesia bovis
Length = 922
Score = 39.5 bits (88), Expect = 0.040
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +3
Query: 3 LIVEEAVSDDNSVVALSQAK--MEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIR 176
L V V D NS + + K +L + G+ V ++GK+R +TVC+V D N D ++
Sbjct: 135 LFVLSGVFDGNSSIEIRMGKEPANKLGVAEGNLVRVRGKKRCDTVCVVGIDPNITDNQVL 194
Query: 177 MXXXXXXXXXXXXSDVVSI 233
+ DV+SI
Sbjct: 195 IHSDTRRNLKLRTGDVMSI 213
>UniRef50_Q8IJW9 Cluster: Putative uncharacterized protein; n=3;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 646
Score = 38.7 bits (86), Expect = 0.070
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +2
Query: 236 SVSFSENGKRVHILPIDDSVEGLTG-NLFEVYLKPYFMEAYRPIHR-DDTFMVRGGMRAV 409
SV E K VHI+P+ D++ +LF Y+KPY Y ++ DTF +G V
Sbjct: 393 SVDTYEQYKNVHIVPMYDTLPTTYNYDLFMDYVKPYIERHYLNVYSIHDTFFYKG----V 448
Query: 410 EFKVVETDP 436
+FK++ DP
Sbjct: 449 QFKIMGIDP 457
>UniRef50_Q1JSD1 Cluster: Transitional endoplasmic reticulum ATPase;
n=1; Toxoplasma gondii|Rep: Transitional endoplasmic
reticulum ATPase - Toxoplasma gondii
Length = 792
Score = 37.9 bits (84), Expect = 0.12
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 63 MEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAP 239
M LQ+ RGD VLL G+R++ETV I + D + + + D + + P
Sbjct: 1 MAALQVQRGDVVLLSGRRKRETVAIAMPDRSLEARHVVLHAHALKNIKLHAQDAIKVTP 59
>UniRef50_A2FWK7 Cluster: ATPase, AAA family protein; n=1;
Trichomonas vaginalis G3|Rep: ATPase, AAA family protein
- Trichomonas vaginalis G3
Length = 2005
Score = 37.9 bits (84), Expect = 0.12
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +2
Query: 248 SENGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVE 427
S+ + V + PI D++ G++GN ++ + + P++ + F V R VEF+V++
Sbjct: 87 SQKAEIVLVAPIADTINGISGNFCDLIQESSYKFNNFPVYPNFIFPVYTMQRVVEFQVIK 146
Query: 428 TDPS-PFCIVAPDTVIHCDGEPI 493
PS IV V +P+
Sbjct: 147 CSPSGAHVIVTSADVFSSRSQPV 169
>UniRef50_A2FTG5 Cluster: ATPase, AAA family protein; n=1;
Trichomonas vaginalis G3|Rep: ATPase, AAA family protein
- Trichomonas vaginalis G3
Length = 1041
Score = 37.9 bits (84), Expect = 0.12
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = +2
Query: 266 VHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPF 445
V I + ++++G+ G++ ++ + PI RD V R +EFKVV P
Sbjct: 95 VIISAVSETIDGIDGSIIDLLYASNYDFVGMPIRRDQIIPVYALNRVIEFKVVNCSPEEE 154
Query: 446 CIVAPDTVIHCDGEPI 493
I+ VI +PI
Sbjct: 155 VIIQDKEVILYRNQPI 170
>UniRef50_A2QZY1 Cluster: Remark: Cdc48p of S. cerevisiae is more
than twice the length of this protein; n=1; Aspergillus
niger|Rep: Remark: Cdc48p of S. cerevisiae is more than
twice the length of this protein - Aspergillus niger
Length = 302
Score = 37.9 bits (84), Expect = 0.12
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = +2
Query: 290 SVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTV 469
+ E L+G L ++ PYF R I+ D + G +EFKV+ P + V T
Sbjct: 179 TTENLSGRLLHDFVNPYFTRCTRLINVHDHIFISSGACDIEFKVLSIKPLEYGFVTQKTN 238
Query: 470 IHCDG 484
I G
Sbjct: 239 IVLSG 243
>UniRef50_A5K794 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 615
Score = 36.3 bits (80), Expect = 0.37
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +2
Query: 260 KRVHILPIDDSVEGLTG-NLFEVYLKPYFMEAYRPI-HRDDTFMVRGGMRAVEFKVVETD 433
+ VHI+P+ D++ N+F Y+KPY Y + DTF +G V+FK++ D
Sbjct: 370 RNVHIVPLYDTLPTTYNYNIFADYIKPYIERHYLSLFSMHDTFFYKG----VQFKIMGID 425
Query: 434 P 436
P
Sbjct: 426 P 426
>UniRef50_Q7QTA1 Cluster: GLP_15_26945_31573; n=3; root|Rep:
GLP_15_26945_31573 - Giardia lamblia ATCC 50803
Length = 1542
Score = 34.7 bits (76), Expect = 1.1
Identities = 22/75 (29%), Positives = 29/75 (38%), Gaps = 7/75 (9%)
Frame = -2
Query: 267 TRFPFSLKDTELWIPHQKDAHEGCFSRHGSSEFSH-------QGNYHLRARCKRFPCGVC 109
TR+ FS K+ +P HEG FS E+ H G Y R + F C +C
Sbjct: 1137 TRYEFSTKNDTYTVPFPLTVHEGRFSVPTKIEYFHPDRPTCKDGEYAWRLQTGAFTCMIC 1196
Query: 108 L*ARLCHHGRVEVAP 64
C G + P
Sbjct: 1197 PTGYFCSEGVMNPCP 1211
>UniRef50_Q7RTI8 Cluster: Putative uncharacterized protein PY00003;
n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY00003 - Plasmodium yoelii yoelii
Length = 628
Score = 34.3 bits (75), Expect = 1.5
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 251 ENGKRVHILPIDDSVEGLTG-NLFEVYLKPYFMEAY-RPIHRDDTFMVRGGMRAVEFKVV 424
E VHI+P+ D++ NLF Y+KPY Y DTF RG V+FK++
Sbjct: 367 EEYTHVHIVPLYDTLPTTYNYNLFIDYIKPYIERHYLNTFSIYDTFFYRG----VQFKIM 422
Query: 425 ETDP 436
+P
Sbjct: 423 GVEP 426
>UniRef50_A4A8Q6 Cluster: Putative uncharacterized protein; n=1;
Congregibacter litoralis KT71|Rep: Putative
uncharacterized protein - Congregibacter litoralis KT71
Length = 611
Score = 33.9 bits (74), Expect = 2.0
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 224 GIHSSVSFSENGKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRP 361
G+H S SE +++ LP++DS+ G N+ + YL P + +P
Sbjct: 171 GLHQLYSLSER-QQLAKLPVEDSLRGTRSNIAQEYLAPLLLACAKP 215
>UniRef50_Q5CYT2 Cluster: 3CCCH domain containing protein; n=2;
Cryptosporidium|Rep: 3CCCH domain containing protein -
Cryptosporidium parvum Iowa II
Length = 591
Score = 33.1 bits (72), Expect = 3.5
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Frame = -2
Query: 279 GSMWTRFPFSLKDTEL---WIPHQKDAHEGCFSRHGSSEFSHQGNYHLRARCKRFPCGV- 112
GS R P +LK T+L W+ E C HG++E +++ + C+ + GV
Sbjct: 117 GSEDLRTPVNLKKTKLCPFWLSSACSIGENCPFAHGTTELRVTNDFYKTSVCRYWKMGVK 176
Query: 111 CL*ARLCHHGRVE 73
C LC H E
Sbjct: 177 CDAGVLCRHAHGE 189
>UniRef50_Q1YDJ6 Cluster: Putative uncharacterized protein; n=1;
Aurantimonas sp. SI85-9A1|Rep: Putative uncharacterized
protein - Aurantimonas sp. SI85-9A1
Length = 158
Score = 32.7 bits (71), Expect = 4.6
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -2
Query: 324 TSNRLPVRPSTESSIGSMWTRFPFSLKDTELWIPHQKD 211
T L +R S+ S GS WTR PFS T + KD
Sbjct: 44 TDRYLAIRASSAPSTGSSWTRSPFSRTSTRSAMSRAKD 81
>UniRef50_Q4MZM6 Cluster: Cell division cycle protein 48, putative;
n=1; Theileria parva|Rep: Cell division cycle protein
48, putative - Theileria parva
Length = 954
Score = 32.7 bits (71), Expect = 4.6
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +3
Query: 27 DDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVC 134
+ N V + +A+ +L + GD + +KG+RRK TVC
Sbjct: 154 NSNVNVRIGKAQANKLSVMPGDLLKVKGRRRKVTVC 189
>UniRef50_Q09AB1 Cluster: Putative uncharacterized protein; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: Putative
uncharacterized protein - Stigmatella aurantiaca DW4/3-1
Length = 638
Score = 31.9 bits (69), Expect = 8.0
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = +1
Query: 328 LEAVLHGGLPSDPS*RHLHG---PGGHARRRVQS-GRNRSITIL 447
+EAVLHGG+ +HL G PGGH V GR R+ +L
Sbjct: 361 IEAVLHGGVGGQVRVKHLQGELRPGGHVLGEVHGPGRPRAQLLL 404
>UniRef50_Q4UBT9 Cluster: Cell divison cycle CDC48 homologue,
putative or transitional endoplasmic reticulum ATPase,
putative; n=1; Theileria annulata|Rep: Cell divison
cycle CDC48 homologue, putative or transitional
endoplasmic reticulum ATPase, putative - Theileria
annulata
Length = 905
Score = 31.9 bits (69), Expect = 8.0
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 27 DDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVC 134
+ N V + + + +L L GD V ++G+RRK TVC
Sbjct: 129 NSNVNVKIGKEQANKLNLMTGDFVKVRGRRRKVTVC 164
>UniRef50_Q4E0K4 Cluster: Ubiquitin hydrolase, putative; n=3;
Trypanosoma cruzi|Rep: Ubiquitin hydrolase, putative -
Trypanosoma cruzi
Length = 1135
Score = 31.9 bits (69), Expect = 8.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 93 CHHGRVEVAPFWPVKVP 43
CHH R +++PFW + VP
Sbjct: 752 CHHTRTQLSPFWDISVP 768
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 527,031,405
Number of Sequences: 1657284
Number of extensions: 10731598
Number of successful extensions: 29833
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 28832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29823
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28437262108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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