Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20671
(493 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 158 1e-38
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 158 1e-38
AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing prot... 158 1e-38
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 158 1e-38
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 158 1e-38
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 155 8e-38
BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein. 62 1e-09
D87464-1|BAA13403.2| 932|Homo sapiens KIAA0274 protein. 29 6.6
BC067265-1|AAH67265.1| 348|Homo sapiens lectin, mannose-binding... 29 6.6
BC041338-1|AAH41338.1| 907|Homo sapiens FIG4 homolog (S. cerevi... 29 6.6
BC005862-1|AAH05862.2| 347|Homo sapiens LMAN2L protein protein. 29 6.6
BC005822-1|AAH05822.2| 347|Homo sapiens LMAN2L protein protein. 29 6.6
BC000347-1|AAH00347.2| 347|Homo sapiens LMAN2L protein protein. 29 6.6
AY358929-1|AAQ89288.1| 348|Homo sapiens AATL368 protein. 29 6.6
AL512303-2|CAI42494.1| 907|Homo sapiens RP1-249I4.1 protein. 29 6.6
AL133472-3|CAI19669.1| 907|Homo sapiens RP1-249I4.1 protein. 29 6.6
AK222828-1|BAD96548.1| 348|Homo sapiens lectin, mannose-binding... 29 6.6
AK222732-1|BAD96452.1| 907|Homo sapiens Sac domain-containing i... 29 6.6
AK075347-1|BAC11559.1| 348|Homo sapiens protein ( Homo sapiens ... 29 6.6
AJ549957-1|CAD71268.1| 348|Homo sapiens VIP36-like protein prec... 29 6.6
AC068539-1|AAX93211.1| 348|Homo sapiens unknown protein. 29 6.6
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 158 bits (383), Expect = 1e-38
Identities = 67/79 (84%), Positives = 76/79 (96%)
Frame = +2
Query: 257 GKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDP 436
GKR+H+LPIDD+VEG+TGNLFEVYLKPYF+EAYRPI + D F+VRGGMRAVEFKVVETDP
Sbjct: 111 GKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDP 170
Query: 437 SPFCIVAPDTVIHCDGEPI 493
SP+CIVAPDTVIHC+GEPI
Sbjct: 171 SPYCIVAPDTVIHCEGEPI 189
Score = 117 bits (282), Expect = 2e-26
Identities = 55/84 (65%), Positives = 65/84 (77%)
Frame = +3
Query: 3 LIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMX 182
LIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCIVLSDD C DEKIRM
Sbjct: 26 LIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMN 85
Query: 183 XXXXXXXXXXXSDVVSIAPCPSVK 254
DV+SI PCP VK
Sbjct: 86 RVVRNNLRVRLGDVISIQPCPDVK 109
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 158 bits (383), Expect = 1e-38
Identities = 67/79 (84%), Positives = 76/79 (96%)
Frame = +2
Query: 257 GKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDP 436
GKR+H+LPIDD+VEG+TGNLFEVYLKPYF+EAYRPI + D F+VRGGMRAVEFKVVETDP
Sbjct: 111 GKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDP 170
Query: 437 SPFCIVAPDTVIHCDGEPI 493
SP+CIVAPDTVIHC+GEPI
Sbjct: 171 SPYCIVAPDTVIHCEGEPI 189
Score = 117 bits (282), Expect = 2e-26
Identities = 55/84 (65%), Positives = 65/84 (77%)
Frame = +3
Query: 3 LIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMX 182
LIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCIVLSDD C DEKIRM
Sbjct: 26 LIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMN 85
Query: 183 XXXXXXXXXXXSDVVSIAPCPSVK 254
DV+SI PCP VK
Sbjct: 86 RVVRNNLRVRLGDVISIQPCPDVK 109
>AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing protein
protein.
Length = 307
Score = 158 bits (383), Expect = 1e-38
Identities = 67/79 (84%), Positives = 76/79 (96%)
Frame = +2
Query: 257 GKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDP 436
GKR+H+LPIDD+VEG+TGNLFEVYLKPYF+EAYRPI + D F+VRGGMRAVEFKVVETDP
Sbjct: 49 GKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDP 108
Query: 437 SPFCIVAPDTVIHCDGEPI 493
SP+CIVAPDTVIHC+GEPI
Sbjct: 109 SPYCIVAPDTVIHCEGEPI 127
Score = 54.8 bits (126), Expect = 2e-07
Identities = 25/45 (55%), Positives = 27/45 (60%)
Frame = +3
Query: 120 KETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVK 254
+E VCIVLSDD C DEKIRM DV+SI PCP VK
Sbjct: 3 REAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVK 47
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 158 bits (383), Expect = 1e-38
Identities = 67/79 (84%), Positives = 76/79 (96%)
Frame = +2
Query: 257 GKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDP 436
GKR+H+LPIDD+VEG+TGNLFEVYLKPYF+EAYRPI + D F+VRGGMRAVEFKVVETDP
Sbjct: 111 GKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDP 170
Query: 437 SPFCIVAPDTVIHCDGEPI 493
SP+CIVAPDTVIHC+GEPI
Sbjct: 171 SPYCIVAPDTVIHCEGEPI 189
Score = 117 bits (282), Expect = 2e-26
Identities = 55/84 (65%), Positives = 65/84 (77%)
Frame = +3
Query: 3 LIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMX 182
LIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCIVLSDD C DEKIRM
Sbjct: 26 LIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMN 85
Query: 183 XXXXXXXXXXXSDVVSIAPCPSVK 254
DV+SI PCP VK
Sbjct: 86 RVVRNNLRVRLGDVISIQPCPDVK 109
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 158 bits (383), Expect = 1e-38
Identities = 67/79 (84%), Positives = 76/79 (96%)
Frame = +2
Query: 257 GKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDP 436
GKR+H+LPIDD+VEG+TGNLFEVYLKPYF+EAYRPI + D F+VRGGMRAVEFKVVETDP
Sbjct: 111 GKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDP 170
Query: 437 SPFCIVAPDTVIHCDGEPI 493
SP+CIVAPDTVIHC+GEPI
Sbjct: 171 SPYCIVAPDTVIHCEGEPI 189
Score = 117 bits (282), Expect = 2e-26
Identities = 55/84 (65%), Positives = 65/84 (77%)
Frame = +3
Query: 3 LIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMX 182
LIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCIVLSDD C DEKIRM
Sbjct: 26 LIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMN 85
Query: 183 XXXXXXXXXXXSDVVSIAPCPSVK 254
DV+SI PCP VK
Sbjct: 86 RVVRNNLRVRLGDVISIQPCPDVK 109
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 155 bits (376), Expect = 8e-38
Identities = 66/79 (83%), Positives = 75/79 (94%)
Frame = +2
Query: 257 GKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDP 436
GKR+H+LPIDD+VEG+TGNLFEVYLKPYF+EAYRPI + D F+VRGGMRAVEFKVVET P
Sbjct: 111 GKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETHP 170
Query: 437 SPFCIVAPDTVIHCDGEPI 493
SP+CIVAPDTVIHC+GEPI
Sbjct: 171 SPYCIVAPDTVIHCEGEPI 189
Score = 117 bits (282), Expect = 2e-26
Identities = 55/84 (65%), Positives = 65/84 (77%)
Frame = +3
Query: 3 LIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMX 182
LIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKGK+R+E VCIVLSDD C DEKIRM
Sbjct: 26 LIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMN 85
Query: 183 XXXXXXXXXXXSDVVSIAPCPSVK 254
DV+SI PCP VK
Sbjct: 86 RVVRNNLRVRLGDVISIQPCPDVK 109
>BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein.
Length = 644
Score = 62.1 bits (144), Expect = 1e-09
Identities = 25/27 (92%), Positives = 27/27 (100%)
Frame = +2
Query: 413 FKVVETDPSPFCIVAPDTVIHCDGEPI 493
FKVVETDPSP+CIVAPDTVIHC+GEPI
Sbjct: 1 FKVVETDPSPYCIVAPDTVIHCEGEPI 27
>D87464-1|BAA13403.2| 932|Homo sapiens KIAA0274 protein.
Length = 932
Score = 29.5 bits (63), Expect = 6.6
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +2
Query: 320 EVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEF--KVVETDPSPFCIVAPD 463
E+ + F Y DDTF + A +F K V DPSPF + PD
Sbjct: 695 EIDIHNEFFRPYELSSFDDTFCLAMTSSARDFMPKTVGIDPSPFTVRKPD 744
>BC067265-1|AAH67265.1| 348|Homo sapiens lectin, mannose-binding
2-like protein.
Length = 348
Score = 29.5 bits (63), Expect = 6.6
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -2
Query: 300 PSTESSIGSMWTRFPFSLKDTELWIPHQKDAHEGCFSRHG 181
P +S G++W R P L+D EL + H K +G + HG
Sbjct: 89 PDMQSKQGALWNRVPCFLRDWELQV-HFKIHGQGKKNLHG 127
>BC041338-1|AAH41338.1| 907|Homo sapiens FIG4 homolog (S.
cerevisiae) protein.
Length = 907
Score = 29.5 bits (63), Expect = 6.6
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +2
Query: 320 EVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEF--KVVETDPSPFCIVAPD 463
E+ + F Y DDTF + A +F K V DPSPF + PD
Sbjct: 670 EIDIHNEFFRPYELSSFDDTFCLAMTSSARDFMPKTVGIDPSPFTVRKPD 719
>BC005862-1|AAH05862.2| 347|Homo sapiens LMAN2L protein protein.
Length = 347
Score = 29.5 bits (63), Expect = 6.6
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -2
Query: 300 PSTESSIGSMWTRFPFSLKDTELWIPHQKDAHEGCFSRHG 181
P +S G++W R P L+D EL + H K +G + HG
Sbjct: 88 PDMQSKQGALWNRVPCFLRDWELQV-HFKIHGQGKKNLHG 126
>BC005822-1|AAH05822.2| 347|Homo sapiens LMAN2L protein protein.
Length = 347
Score = 29.5 bits (63), Expect = 6.6
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -2
Query: 300 PSTESSIGSMWTRFPFSLKDTELWIPHQKDAHEGCFSRHG 181
P +S G++W R P L+D EL + H K +G + HG
Sbjct: 88 PDMQSKQGALWNRVPCFLRDWELQV-HFKIHGQGKKNLHG 126
>BC000347-1|AAH00347.2| 347|Homo sapiens LMAN2L protein protein.
Length = 347
Score = 29.5 bits (63), Expect = 6.6
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -2
Query: 300 PSTESSIGSMWTRFPFSLKDTELWIPHQKDAHEGCFSRHG 181
P +S G++W R P L+D EL + H K +G + HG
Sbjct: 88 PDMQSKQGALWNRVPCFLRDWELQV-HFKIHGQGKKNLHG 126
>AY358929-1|AAQ89288.1| 348|Homo sapiens AATL368 protein.
Length = 348
Score = 29.5 bits (63), Expect = 6.6
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -2
Query: 300 PSTESSIGSMWTRFPFSLKDTELWIPHQKDAHEGCFSRHG 181
P +S G++W R P L+D EL + H K +G + HG
Sbjct: 89 PDMQSKQGALWNRVPCFLRDWELQV-HFKIHGQGKKNLHG 127
>AL512303-2|CAI42494.1| 907|Homo sapiens RP1-249I4.1 protein.
Length = 907
Score = 29.5 bits (63), Expect = 6.6
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +2
Query: 320 EVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEF--KVVETDPSPFCIVAPD 463
E+ + F Y DDTF + A +F K V DPSPF + PD
Sbjct: 670 EIDIHNEFFRPYELSSFDDTFCLAMTSSARDFMPKTVGIDPSPFTVRKPD 719
>AL133472-3|CAI19669.1| 907|Homo sapiens RP1-249I4.1 protein.
Length = 907
Score = 29.5 bits (63), Expect = 6.6
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +2
Query: 320 EVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEF--KVVETDPSPFCIVAPD 463
E+ + F Y DDTF + A +F K V DPSPF + PD
Sbjct: 670 EIDIHNEFFRPYELSSFDDTFCLAMTSSARDFMPKTVGIDPSPFTVRKPD 719
>AK222828-1|BAD96548.1| 348|Homo sapiens lectin, mannose-binding
2-like variant protein.
Length = 348
Score = 29.5 bits (63), Expect = 6.6
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -2
Query: 300 PSTESSIGSMWTRFPFSLKDTELWIPHQKDAHEGCFSRHG 181
P +S G++W R P L+D EL + H K +G + HG
Sbjct: 89 PDMQSKQGALWNRVPCFLRDWELQV-HFKIHGQGKKNLHG 127
>AK222732-1|BAD96452.1| 907|Homo sapiens Sac domain-containing
inositol phosphatase 3 variant protein.
Length = 907
Score = 29.5 bits (63), Expect = 6.6
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +2
Query: 320 EVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEF--KVVETDPSPFCIVAPD 463
E+ + F Y DDTF + A +F K V DPSPF + PD
Sbjct: 670 EIDIHNEFFRPYELSSFDDTFCLAMTSSARDFMPKTVGIDPSPFTVRKPD 719
>AK075347-1|BAC11559.1| 348|Homo sapiens protein ( Homo sapiens
cDNA PSEC0028 fis, clone NT2RP1000533, highly similar to
VIP36-like protein precursor. ).
Length = 348
Score = 29.5 bits (63), Expect = 6.6
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -2
Query: 300 PSTESSIGSMWTRFPFSLKDTELWIPHQKDAHEGCFSRHG 181
P +S G++W R P L+D EL + H K +G + HG
Sbjct: 89 PDMQSKQGALWNRVPCFLRDWELQV-HFKIHGQGKKNLHG 127
>AJ549957-1|CAD71268.1| 348|Homo sapiens VIP36-like protein
precursor protein.
Length = 348
Score = 29.5 bits (63), Expect = 6.6
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -2
Query: 300 PSTESSIGSMWTRFPFSLKDTELWIPHQKDAHEGCFSRHG 181
P +S G++W R P L+D EL + H K +G + HG
Sbjct: 89 PDMQSKQGALWNRVPCFLRDWELQV-HFKIHGQGKKNLHG 127
>AC068539-1|AAX93211.1| 348|Homo sapiens unknown protein.
Length = 348
Score = 29.5 bits (63), Expect = 6.6
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -2
Query: 300 PSTESSIGSMWTRFPFSLKDTELWIPHQKDAHEGCFSRHG 181
P +S G++W R P L+D EL + H K +G + HG
Sbjct: 89 PDMQSKQGALWNRVPCFLRDWELQV-HFKIHGQGKKNLHG 127
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,949,564
Number of Sequences: 237096
Number of extensions: 1661064
Number of successful extensions: 3391
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3391
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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