Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20671
         (493 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF132553-1|AAD27852.1|  801|Drosophila melanogaster BcDNA.GM0288...   138   5e-33
AF047037-1|AAC27447.1|  801|Drosophila melanogaster transitional...   138   5e-33
AE013599-984|AAF58863.1|  801|Drosophila melanogaster CG2331-PA,...   138   5e-33
AF202034-1|AAF17568.1|  799|Drosophila melanogaster endoplasmic ...   125   3e-29

>AF132553-1|AAD27852.1|  801|Drosophila melanogaster BcDNA.GM02885
           protein.
          Length = 801

 Score =  138 bits (333), Expect = 5e-33
 Identities = 59/79 (74%), Positives = 68/79 (86%)
 Frame = +2

Query: 257 GKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDP 436
           GKRV ILPID+S EG+TGNLFE+YLKPYF+EAYRPIH  D F+VR  MR +EFKVV TDP
Sbjct: 108 GKRVRILPIDESTEGVTGNLFEIYLKPYFLEAYRPIHMGDNFIVRAAMRPIEFKVVLTDP 167

Query: 437 SPFCIVAPDTVIHCDGEPI 493
            P+CIVAP+TVI CDG+PI
Sbjct: 168 EPYCIVAPETVIFCDGDPI 186



 Score =  125 bits (302), Expect = 3e-29
 Identities = 61/84 (72%), Positives = 67/84 (79%)
 Frame = +3

Query: 3   LIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMX 182
           LIVEEA +DDNSVV+LSQAKM++LQLFRGDTV+LKGKRRKETVCIVLSDD CPDEKIRM 
Sbjct: 23  LIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGKRRKETVCIVLSDDTCPDEKIRMN 82

Query: 183 XXXXXXXXXXXSDVVSIAPCPSVK 254
                      SDVVS+  CP VK
Sbjct: 83  RVVRNNLCVHLSDVVSVQSCPDVK 106


>AF047037-1|AAC27447.1|  801|Drosophila melanogaster transitional
           endoplasmic reticulumATPase TER94 protein.
          Length = 801

 Score =  138 bits (333), Expect = 5e-33
 Identities = 59/79 (74%), Positives = 68/79 (86%)
 Frame = +2

Query: 257 GKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDP 436
           GKRV ILPID+S EG+TGNLFE+YLKPYF+EAYRPIH  D F+VR  MR +EFKVV TDP
Sbjct: 108 GKRVRILPIDESTEGVTGNLFEIYLKPYFLEAYRPIHMGDNFIVRAAMRPIEFKVVLTDP 167

Query: 437 SPFCIVAPDTVIHCDGEPI 493
            P+CIVAP+TVI CDG+PI
Sbjct: 168 EPYCIVAPETVIFCDGDPI 186



 Score =  125 bits (302), Expect = 3e-29
 Identities = 61/84 (72%), Positives = 67/84 (79%)
 Frame = +3

Query: 3   LIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMX 182
           LIVEEA +DDNSVV+LSQAKM++LQLFRGDTV+LKGKRRKETVCIVLSDD CPDEKIRM 
Sbjct: 23  LIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGKRRKETVCIVLSDDTCPDEKIRMN 82

Query: 183 XXXXXXXXXXXSDVVSIAPCPSVK 254
                      SDVVS+  CP VK
Sbjct: 83  RVVRNNLCVHLSDVVSVQSCPDVK 106


>AE013599-984|AAF58863.1|  801|Drosophila melanogaster CG2331-PA,
           isoform A protein.
          Length = 801

 Score =  138 bits (333), Expect = 5e-33
 Identities = 59/79 (74%), Positives = 68/79 (86%)
 Frame = +2

Query: 257 GKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDP 436
           GKRV ILPID+S EG+TGNLFE+YLKPYF+EAYRPIH  D F+VR  MR +EFKVV TDP
Sbjct: 108 GKRVRILPIDESTEGVTGNLFEIYLKPYFLEAYRPIHMGDNFIVRAAMRPIEFKVVLTDP 167

Query: 437 SPFCIVAPDTVIHCDGEPI 493
            P+CIVAP+TVI CDG+PI
Sbjct: 168 EPYCIVAPETVIFCDGDPI 186



 Score =  125 bits (302), Expect = 3e-29
 Identities = 61/84 (72%), Positives = 67/84 (79%)
 Frame = +3

Query: 3   LIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMX 182
           LIVEEA +DDNSVV+LSQAKM++LQLFRGDTV+LKGKRRKETVCIVLSDD CPDEKIRM 
Sbjct: 23  LIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGKRRKETVCIVLSDDTCPDEKIRMN 82

Query: 183 XXXXXXXXXXXSDVVSIAPCPSVK 254
                      SDVVS+  CP VK
Sbjct: 83  RVVRNNLCVHLSDVVSVQSCPDVK 106


>AF202034-1|AAF17568.1|  799|Drosophila melanogaster endoplasmic
           reticulum membranefusion protein protein.
          Length = 799

 Score =  125 bits (302), Expect = 3e-29
 Identities = 61/84 (72%), Positives = 67/84 (79%)
 Frame = +3

Query: 3   LIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPDEKIRMX 182
           LIVEEA +DDNSVV+LSQAKM++LQLFRGDTV+LKGKRRKETVCIVLSDD CPDEKIRM 
Sbjct: 23  LIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGKRRKETVCIVLSDDTCPDEKIRMN 82

Query: 183 XXXXXXXXXXXSDVVSIAPCPSVK 254
                      SDVVS+  CP VK
Sbjct: 83  RVVRNNLCVHLSDVVSVQSCPDVK 106



 Score =  124 bits (298), Expect = 9e-29
 Identities = 54/79 (68%), Positives = 62/79 (78%)
 Frame = +2

Query: 257 GKRVHILPIDDSVEGLTGNLFEVYLKPYFMEAYRPIHRDDTFMVRGGMRAVEFKVVETDP 436
           GKRV ILPID+S EG+TGNLFE+YLKPYF      IH  D F+VR  MR +EFKVV TDP
Sbjct: 108 GKRVRILPIDESTEGVTGNLFEIYLKPYFPRGLSAIHMGDNFIVRAAMRPIEFKVVLTDP 167

Query: 437 SPFCIVAPDTVIHCDGEPI 493
            P+CIVAP+TVI CDG+PI
Sbjct: 168 EPYCIVAPETVIFCDGDPI 186


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,249,320
Number of Sequences: 53049
Number of extensions: 533504
Number of successful extensions: 1342
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1342
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1721789184
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)