Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20670
         (474 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   2.5  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   3.3  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   3.3  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   4.4  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   4.4  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   5.8  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   5.8  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   5.8  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   5.8  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   5.8  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   5.8  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   5.8  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   5.8  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   5.8  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   5.8  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   5.8  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   5.8  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   7.7  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   7.7  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   7.7  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 65  NSLSRPSTRSPRVNTKP 15
           +S+S+P  R PR + KP
Sbjct: 255 DSVSQPPNRKPRTDFKP 271


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -3

Query: 418 LATPAWNLARRSSGLMSRISGAKIVPESYTCLTT 317
           L+TP+ + A +SSGL S +S +   P      TT
Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTT 162


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
 Frame = +2

Query: 104 LPHCQSSFPPTTPASVQRK-PLSSKLFPSLPKFQRVLLKSSTMYTXXXXXXXXXXXXHP 277
           +P  Q + P       Q K PLSS  +PS+    ++L+ S  M              HP
Sbjct: 1   MPLLQETTPKRDMLDSQEKTPLSSVSYPSMFTPSQLLMASHLMAASRLSLPTNPAFFHP 59


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 72  VLQQFVTAFNE 40
           +LQQFV  FNE
Sbjct: 145 ILQQFVAIFNE 155


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 72  VLQQFVTAFNE 40
           +LQQFV  FNE
Sbjct: 145 ILQQFVAIFNE 155


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -3

Query: 418 LATPAWNLARRSSGLMSRIS 359
           L+TP+ + A +SSGL S +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLS 148


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -3

Query: 418 LATPAWNLARRSSGLMSRIS 359
           L+TP+ + A +SSGL S +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLS 148


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 267 EATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 380
           + T +N   +SP S GL  +    SGT+  P  L  +P
Sbjct: 198 DGTSVNFHYLSPQSRGLFHRGWSMSGTMLVPWALMEQP 235


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 267 EATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 380
           + T +N   +SP S GL  +    SGT+  P  L  +P
Sbjct: 198 DGTSVNFHYLSPQSRGLFHRGWSMSGTMLVPWALMEQP 235


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 267 EATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 380
           + T +N   +SP S GL  +    SGT+  P  L  +P
Sbjct: 198 DGTSVNFHYLSPQSRGLFHRGWSMSGTMLVPWALMEQP 235


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 267 EATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 380
           + T +N   +SP S GL  +    SGT+  P  L  +P
Sbjct: 198 DGTSVNFHYLSPQSRGLFHRGWSMSGTMLVPWALMEQP 235


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -3

Query: 418 LATPAWNLARRSSGLMSRIS 359
           L+TP+ + A +SSGL S +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLS 148


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -3

Query: 418 LATPAWNLARRSSGLMSRIS 359
           L+TP+ + A +SSGL S +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLS 148


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -3

Query: 418 LATPAWNLARRSSGLMSRIS 359
           L+TP+ + A +SSGL S +S
Sbjct: 85  LSTPSNSNATKSSGLTSPLS 104


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -3

Query: 418 LATPAWNLARRSSGLMSRIS 359
           L+TP+ + A +SSGL S +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLS 148


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -3

Query: 418 LATPAWNLARRSSGLMSRIS 359
           L+TP+ + A +SSGL S +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLS 148


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = -3

Query: 418 LATPAWNLARRSSGLMSRIS 359
           L+TP+ + A +SSGL S +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLS 148


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 416 SNSSLELGTEILWFDVQNFRCKNS 345
           S++ +E  + + WF V+   CK S
Sbjct: 389 SDAEIEKLSTVYWFTVEFGLCKES 412


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/22 (31%), Positives = 9/22 (40%)
 Frame = -2

Query: 143 PVLWAGMTTDNGAMAPGRAGAW 78
           P+ W     D+G   PG    W
Sbjct: 264 PIRWVAKLWDSGLRKPGVGVFW 285


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 114 QWGNGTGTSW 85
           Q+GNG  TSW
Sbjct: 274 QFGNGLETSW 283


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,806
Number of Sequences: 336
Number of extensions: 2814
Number of successful extensions: 22
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11036865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)